Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac6g2273 | ATGGGGGTGAATTTCCAGCGCACGGTTCTTGTGTTTTTTGCGCTTCTTGTTGTTGGGAAGGCGGAAATTTACATTGTCACCATTGACGGAGAACCTATTGTGAGTTACAAAGGTGATCTCGATGGATTTGAAGCCACAGCATTGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTTGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCAGTTGACATCTCACCTGAACAGGCAGAGATTCTAAGACATACACCAATTGTAAAATCTGTTGAGAGGGATTGGAAGGTTAGGAAACTAACAACGCACACACCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACTGGTGGTGGCTTTGACAGGGCTGGAGAAGACATCGTGATTGGATTTGTGGACTCTGGGATTTATCCACATCATCCAAGTTTTGCTACATATAATACCGAACCTTTTGGGCCCTGTTCGAAGTATAAAGGGAAATGTGAAGTTGACCCCGACACCAAGAAGGATTTTTGCAATGGAAAGATTATTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGAGCATTTAACCCAGCTATTCATTTTGCATCTCCTTTGGATGGTGATGGACATGGAAGTCATACGGCAGCAATTGCAGCTGGAAATAACGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCTAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAGGCTCTCTACAGGATTTTTGGAGGATTTGTTGCTGATGTAGTTGCAGCTATTGATCAGGCTGTACATGATGGGGTCGATATTCTCAGTCTTTCCGTTGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACGTATTTAAACCCTTTTGATGCTACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGACCATTTCCTAAAACTTTAGTGTCGTATAGTCCATGGATAGCAACTGTAGCAGCTGCAATCGATGACAGAAGATACAAAAACCATCTAAAACTTGGTAATGGAAAAATTTTGGCTGGACTTGGGTTATCACCTGCTACACATTTAAATCGAACATACACATTGGTCGCAGCTAATGACGTTCTGTTAGATTCTTCAGTAATGAAGTACAGCCCCTCTGACTGCCAAAGGCCTGAAGTTCTAAACAAACGATTGGTTGAAGGAAAAGTTTTACTTTGTGGTTATTCATTCAGTTTTGTTGTTGGTACCGCTTCAATCAAGAAGGTCTCTCAAACAGCAAAAGCCCTTGGTGCGGCTGGCTTTGTTCTTGCTGTTGAAAACATCTCTCCTGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTCATAACTGATGTCAGCAAGTCGATGGATCTTATAGACTACTACAACACCTCAACACCCAGAGATTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGACCCAATATTAGAGACTTTAGCTTTCAGGATGCAGACCTTCTTAAACCAGATATTCTAGCTCCTGGTTCTTTGATATGGGCTGCTTGGTCTCCAAATGGAACGGACGAGCCGAACTATGTCGGAGAGGGATTTGCTATGATTTCTGGAACGAGCATGGCAGCACCGCATATAGCTGGTATAGCAGCTCTTGTAAAACAGAAGCATCCGAACTGGAGTCCTGCAGCCATCAAATCAGCTTTGATGACAACATCAACAACAATGGACAGAGCAGGAAGACCTCTTAAAGCACAACAATTTTCTGAAACAGAAGCCATGAAACTGGTAACTGCAACACCTTTCGATTATGGGAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCTGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTCTTATGCACGACAGCGGGCATCAACGTTCACGAGATACACAACTATACAAAGACACCTTGCAACTTCACCATGGGCCATCCCTGGAATCTCAACAGTCCATCAATCACCATCGCCCATCTTGTGGGAACTCAGACTGTTACTCGCACAGTAACAAATGTAGCTGAGGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAACAAGTCCTCCAGCAATGACTTTACGATCCGGTTCGTCGAGAAAATTTTCAGTAAGTCTCACAGCTCGATCACTGACAGGAACATATAGTTTCGGCGAGGTTCTATTGAAGGGAAGTAGGGGGCACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA | 2451 | 44.19 | MGVNFQRTVLVFFALLVVGKAEIYIVTIDGEPIVSYKGDLDGFEATALESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDISPEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPDTKKDFCNGKIIGAQHFAEAAKAAGAFNPAIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLKLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVMKYSPSDCQRPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRAGRPLKAQQFSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTKTPCNFTMGHPWNLNSPSITIAHLVGTQTVTRTVTNVAEEETYTITARMDPAVAIETSPPAMTLRSGSSRKFSVSLTARSLTGTYSFGEVLLKGSRGHKVRIPVVAMGYQR | 816 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 39899532 | 39907411 | + | Lag0006242.1 | Lac6g2273 | 612042 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac6g2273 | 816 | Gene3D | - | 690 | 813 | - | - | |
Lac6g2273 | 816 | Gene3D | Peptidase S8/S53 domain | 155 | 686 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac6g2273 | 816 | Pfam | Fibronectin type-III domain | 718 | 810 | IPR041469 | - | |
Lac6g2273 | 816 | Gene3D | - | 368 | 533 | - | - | |
Lac6g2273 | 816 | SUPERFAMILY | Protease propeptides/inhibitors | 85 | 126 | - | - | |
Lac6g2273 | 816 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 158 | 169 | IPR023827 | - | |
Lac6g2273 | 816 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 72 | 784 | IPR045051 | - | |
Lac6g2273 | 816 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 596 | 606 | IPR023828 | - | |
Lac6g2273 | 816 | FunFam | Subtilisin-like protease SBT1.5 | 155 | 376 | - | - | |
Lac6g2273 | 816 | SUPERFAMILY | Subtilisin-like | 128 | 677 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac6g2273 | 816 | CDD | PA_subtilisin_like | 375 | 513 | - | - | |
Lac6g2273 | 816 | CDD | Peptidases_S8_3 | 129 | 632 | IPR034197 | - | |
Lac6g2273 | 816 | Pfam | Subtilase family | 153 | 634 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lac6g2273 | 816 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 128 | IPR037045 | - | |
Lac6g2273 | 816 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 122 | 673 | - | - | |
Lac6g2273 | 816 | PRINTS | Subtilisin serine protease family (S8) signature | 232 | 245 | IPR015500 | - | |
Lac6g2273 | 816 | PRINTS | Subtilisin serine protease family (S8) signature | 153 | 172 | IPR015500 | - | |
Lac6g2273 | 816 | PRINTS | Subtilisin serine protease family (S8) signature | 595 | 611 | IPR015500 | - | |
Lac6g2273 | 816 | Pfam | PA domain | 397 | 492 | IPR003137 | - | |
Lac6g2273 | 816 | Pfam | Peptidase inhibitor I9 | 24 | 126 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g1389 | Lac-Chr10:12939452 | Lac6g2273 | Lac-Chr6:39899532 | 1.20E-127 | dispersed | |
Lac6g2273 | Lac-Chr6:39899532 | Lac9g1818 | Lac-Chr9:37984925 | 1.50E-94 | dispersed | |
Lac6g2273 | Lac-Chr6:39899532 | Lac6g2278 | Lac-Chr6:39944003 | 1.90E-94 | proximal | |
Lac10g1390 | Lac-Chr10:12967072 | Lac6g2273 | Lac-Chr6:39899532 | 3.30E-31 | transposed | |
Lac1g3629 | Lac-Chr1:55385447 | Lac6g2273 | Lac-Chr6:39899532 | 6.70E-191 | transposed | |
Lac2g2679 | Lac-Chr2:41234342 | Lac6g2273 | Lac-Chr6:39899532 | 9.40E-65 | wgd |
Pathway information
