Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2278 ATGGGCAGGAAGTTCTCTTTAACCTGGTCGGAGGCTGATTGCTTAACAGAAACGGTCTCGATTATTTCACTTCAAGGAGTTCCCTCTATGAATGTGACAAGTGTAGCATTAGTCTGCACAGGATCTTCTAGTCTAGACTACTACATACAACACCTCTACACCCAGAGACTGGACGGGTCAGCATTGTTTTCTGCTCGTGTGCCCAATATTAGAGATTTTAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGCTTCTTTCATTTGGGCTGCTTGGTCATCAAATGGAACGGACGAGCCGAACTATGTTGGAGAGAGATTTGCGATGATTTCTGGGACTAGCATGGCAGCACCACATATAGCTGGTGCAACAGCTCTTGTAAAACAGAAGCATCCTAACTGGAGTCCAGCAGCCATCAAATCAGCTTTGATGACGCCGACAACAACGGACAGAGCAGGAAGACCTCTTAAAGCACAACAGTTTTCTGAAACAGAAGCCATGAAACTGGTAATTGCAACACCTTTTGATCATTGGAGTGGTCTTGTAAACCCAAGAGCGGCACTGGATCCTGGACTCATCTCTGATGCAGTTTCCTTGTCTGCACTGCATATCTGCATTCAGACATACCTTTTCCTTAATCATATACTGCAGTTGAGTCGTTTTTCGAATATGTATGCAATGGCTCGGCTCACGTCAAATCTTGCTAGATCTGTGCATCAACGTTCACAAGACTGTTACTCTCACAGTAACAAATGTTGCAACTTCACCATGGGCCATTCCTGGAATCTCGACAACCCATCAAGCCCCATCGTTCATCTTGTGGGAACTCAGACTGTTACTAGCACAGTAACAAATGTTGCTGAGGCAGACACCTACACAATCACTGCAAGAATGGACCCTGCTGTTGCCATAGAAACAAATCCTCCAGCAATGACTTTACAATCCGGTTCGTCGAGAGAATTTTCAGCTACTTGCAGCTCGATCCCTGACAGGAACATATAG 1014 45.27 MGRKFSLTWSEADCLTETVSIISLQGVPSMNVTSVALVCTGSSSLDYYIQHLYTQRLDGSALFSARVPNIRDFSFQDADLLKPDILAPASFIWAAWSSNGTDEPNYVGERFAMISGTSMAAPHIAGATALVKQKHPNWSPAAIKSALMTPTTTDRAGRPLKAQQFSETEAMKLVIATPFDHWSGLVNPRAALDPGLISDAVSLSALHICIQTYLFLNHILQLSRFSNMYAMARLTSNLARSVHQRSQDCYSHSNKCCNFTMGHSWNLDNPSSPIVHLVGTQTVTSTVTNVAEADTYTITARMDPAVAIETNPPAMTLQSGSSREFSATCSSIPDRNI 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39944003 39946759 + Lag0006247.1 Lac6g2278 612047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2278 337 ProSitePatterns Serine proteases, subtilase family, serine active site. 116 126 IPR023828 -
Lac6g2278 337 Gene3D Peptidase S8/S53 domain 57 200 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac6g2278 337 MobiDBLite consensus disorder prediction 314 337 - -
Lac6g2278 337 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 321 IPR045051 -
Lac6g2278 337 Gene3D - 239 336 - -
Lac6g2278 337 Pfam Subtilase family 68 152 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac6g2278 337 SUPERFAMILY Subtilisin-like 39 196 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac6g2278 337 ProSiteProfiles Serine proteases, subtilase domain profile. 1 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2278 Lac-Chr6:39944003 Lac5g2154 Lac-Chr5:40085966 3.30E-24 dispersed
Lac6g2273 Lac-Chr6:39899532 Lac6g2278 Lac-Chr6:39944003 1.90E-94 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2278 - - - 0.0