Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2320 ATGGCTGCTGATTCTTCCTTTGATGGTGCTATTTTCGACTCGCCAAAATGTAGTAAGTTGAGTATGCAAGAGAAGAGAGAACTTGTTTATGAAATTTCAAAGTCACAAGTTGCATGTGAGACACTGCAGTCATGGAGCCGCCAAGACATTCTACAAGTCCTGTGTGCAGAGATGGGGAAAGAAAGAAAATATACTGGCTTGACGAAGCAGAAAATTATAGAGCATCTTTTGAGACTCATATCTGAAAAGAGATCATCAGTGTCTGAGGTTTCGAAAAACCCTGAGCCACAATCTCCTGCAGGTGGCCATAAGACTACAAAAAGGCAGAGGAAATCTGATCAGCCAGCTCAGCTTTCTGTTCCTACGAGTGACTTTCCGACCAGTAGTTCTCATAATGATTCTGGTCATATGGCATGCTGCAAAAACTTGGCTTGTCGAGCGACTTTGAATCCAGAAGATGCGTTTTGTAGAAGGTGTTCGTGCTGCATCTGTCGACAGTATGATGACAACAAGGATCCTAGCTTGTGGATAAGTTGCAGTGCCGAGCCTCCATTTCAAGGTGATTCATGCAACATGTCATGTCATCTTGAATGTGCTTTAAAAGATGAAAGATCGGGAATTTCGAAAGCTGGACAAAGCAGGGGAATTGATGGGAGCTTCTACTGTGTGTCTTGTGGGAAATTAAATGATTTGCTTGGTTGCTGCAGAAAACAACTAGTCCATGCAAAAGATACAAGAAGGGTCGACATACTTTGTTATCGTGTCTCTTTGAGCCAAAAGCTTCTCCATGGAACTGAAAAGTATAAAATGCTTTATCAGATTGTTGACGACGCAGTGAGGAAGCTTGAAGCTGAAGTGGGACCAATAGCTGGTGTACCAGTAAAGATGGGTAGAGGTATCGTAAACAGGCTTTCGTCGGGACCCGAAGTGCAAAAACTCTGTGCTTCTGCTATTGAATTACTGGATTCAATGCTCTCCAGCAAATCCTTGCATCTTTTGCCTAATCCTGACATACAAGATGCAAACTTTGTTCCTGAAAACATGGTTAGATTTGAAGATGTTCGGTCAACGTCCCTCACTCTAGTTTTGAGTTGTGAATGTGGGTCTTCTGAGAACCAGGTCGGCTTCACAATATGGCATCATAAGGCAGATGATGCAGATTATCCGACCGAGCCGACATGTATTCTACGACAACCGAAGGCGAGGTTTGTTGTGATGGGACTATCACCTGCTACTGAATATCATTTCAAAATTGTTCTGTTTGAAGAGACTAGAGAGTTGAGGAAGTTTGAAGTTCAGTTCTCAACAATTAGGGAGGTGGAAGAAAACCCAGGCTGCTTAGAAATTGAGAGAAGCCAAAGCCACGCAACCAACTGTAGTGATCTTTCTAATCCTTCCTCAGTTGAAGATGAAACTACCGACATTCTTCCATATGGCGATCGAACCGATAACCTAGGAAAAAACTCCACTGCCTATTTGAAGGGCACTGAAATGCTTTCCTCTGCTAATTTATCAACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGGACACCTGCAGGTACAGTTGCTTTGCTGGATGAGGCAAATGCTGCAGGAATGATTGGTTTGATTCCCAACTCTGTTGGATCAAAGCTCGAGAACAAGCACGGACCACCTGCCCCAAAACTCAACCCCGATAATCCATTAAGCGCCCTTGTTCGGTCTGGAATAGAGCGTGAGCCATTTGTTGGCTGTTCTGAAGATGGCTTGCCTATTACTCCCTGCAAGCTTGAGGTGCTAAAGGATAGTCTTGGAAGGGCCGAGAGACTGAAATCCAGCTGCAAGGACCCCGACAATAGGACTCGAAAAGGAGGGGAACCCCAAGATGGTGGCACGTCAAAGATGCGAACTGGGGAAAGGCAGGACGACAAGTCTGCTGAACACAGTGTCTCGGATCGGGATTTCGAGCACTATGTGAAGGTAATTAGATGGTTAGAGTGCGAGGGACATATCGAAAAGAACTTCAGGCAGAAGTTCCTCACTTGGTACAGCTTGAGAGCATCCCAACAAGAAGTAAAGATTGTGAAGGTGTTTGTTGATACCTTCATTGAAGATCCAGCATCTCTTGCAGAACAACTTGTAGATACTTTTTCCGAAAGCATTTCGAGCAAAAAACCGACGACTACGCCGCCCGGGTTCTGCATGAAGCTGTGGCACTGA 2205 44.63 MAADSSFDGAIFDSPKCSKLSMQEKRELVYEISKSQVACETLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLISEKRSSVSEVSKNPEPQSPAGGHKTTKRQRKSDQPAQLSVPTSDFPTSSSHNDSGHMACCKNLACRATLNPEDAFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDERSGISKAGQSRGIDGSFYCVSCGKLNDLLGCCRKQLVHAKDTRRVDILCYRVSLSQKLLHGTEKYKMLYQIVDDAVRKLEAEVGPIAGVPVKMGRGIVNRLSSGPEVQKLCASAIELLDSMLSSKSLHLLPNPDIQDANFVPENMVRFEDVRSTSLTLVLSCECGSSENQVGFTIWHHKADDADYPTEPTCILRQPKARFVVMGLSPATEYHFKIVLFEETRELRKFEVQFSTIREVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRTDNLGKNSTAYLKGTEMLSSANLSTDAFNLSDNGEEGTPAGTVALLDEANAAGMIGLIPNSVGSKLENKHGPPAPKLNPDNPLSALVRSGIEREPFVGCSEDGLPITPCKLEVLKDSLGRAERLKSSCKDPDNRTRKGGEPQDGGTSKMRTGERQDDKSAEHSVSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSESISSKKPTTTPPGFCMKLWH 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 40636913 40640821 - Lag0006289.1 Lac6g2320 612089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2320 734 MobiDBLite consensus disorder prediction 85 103 - -
Lac6g2320 734 MobiDBLite consensus disorder prediction 112 129 - -
Lac6g2320 734 MobiDBLite consensus disorder prediction 85 129 - -
Lac6g2320 734 PANTHER VIN3-LIKE PROTEIN 2-RELATED 13 734 IPR044514 GO:0010048(InterPro)|GO:0040029(InterPro)
Lac6g2320 734 MobiDBLite consensus disorder prediction 603 644 - -
Lac6g2320 734 Pfam PHD - plant homeodomain finger protein 140 260 IPR032881 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0883 Lac-Chr3:7130618 Lac6g2320 Lac-Chr6:40636913 2.00E-97 dispersed
Lac6g2320 Lac-Chr6:40636913 Lac6g2982 Lac-Chr6:47404915 1.20E-92 dispersed
Lac6g0996 Lac-Chr6:9094793 Lac6g2320 Lac-Chr6:40636913 4.20E-118 transposed
Lac3g0327 Lac-Chr3:2353376 Lac6g2320 Lac-Chr6:40636913 5.00E-243 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2320 - - - 0.0