Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2399 ATGGTGTGGTGGTGGTGGAGAGCGGCGACGGCGCCGATCGGCGATGAGGAGGTGGGAAGAAGTAGAGAGAAGGTGAGGAGGGAGAGAGAAAGTTTGACAATAACAGTCAAGACGTGTTTGGCAGGTTACCTTAACAACGAAGAAGCTACGGAGAAGACCATAGACAAAGATGGATGGCTCCACACAGGAGACTTAGGGTTCATCGACGACGACGACGAGATCTTCATCGTCGATCGACTAAAGGAACTGATCAAATACAAAGGATACCAAGTGGCCCCAGCTGAGCTTGAAGCTCTCTTGATTTCAAACCCTAACATTTCTGCTGCTGCTGTCATACCAATGGAAAATGAAGCAGTAGGAGAGATCCCTGTGGCATTTGTTGTGAGATCTGAAGGTTCCAAGATTAGTGAGGATGATATCAAAAAGTATATTTCAGATCAGGTGATATATTACAAAAAGATCAGAAAGGTTATCTTTGTGGACTCAATTCCAATGGCTCCTTCAGGCAAGATATTGAGGAAAGTTTTAAAAGCTAAGTTGGAGGCTGGTGCCTTTTAA 558 44.98 MVWWWWRAATAPIGDEEVGRSREKVRRERESLTITVKTCLAGYLNNEEATEKTIDKDGWLHTGDLGFIDDDDEIFIVDRLKELIKYKGYQVAPAELEALLISNPNISAAAVIPMENEAVGEIPVAFVVRSEGSKISEDDIKKYISDQVIYYKKIRKVIFVDSIPMAPSGKILRKVLKAKLEAGAF 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 41669985 41672052 - Lag0006368.1 Lac6g2399 612168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2399 185 Pfam AMP-binding enzyme C-terminal domain 95 170 IPR025110 -
Lac6g2399 185 SUPERFAMILY Acetyl-CoA synthetase-like 37 180 - -
Lac6g2399 185 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 177 - GO:0016405(PANTHER)
Lac6g2399 185 FunFam 4-coumarate--CoA ligase 2 82 183 - -
Lac6g2399 185 Gene3D - 82 182 IPR045851 -
Lac6g2399 185 Gene3D - 10 81 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2399 Lac-Chr6:41669985 Lac9g1420 Lac-Chr9:32082077 3.40E-47 dispersed
Lac3g0310 Lac-Chr3:2202850 Lac6g2399 Lac-Chr6:41669985 1.30E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2399 K01904 - csv:101210868 246.899