Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac6g2423 | ATGGGTTTGGTTGAAGAATACTTGCCAGTAATGGCGATGTTTGGAATTCAAGTGATCTACGCCGTTATGACTCTTCTCTCCCGAGCTGCCCTCTTGAAGGGCATGAGCCCTAGAGTGTTCGTTGTTTACAGGCAGGCCATTGCCACTCTCTTTATTTCACCCATTGCTTATTTTTCCAGGTCGAAATCCATGAGAATATCTTTGGACTTGAAGAGCTTTTCTCTGATTTTCCTTGCTTCTTTTGTCGGTTCAACGTTGAACCTCAATTTGTACTTTGAGGGAGTTTTCTTAGCCAACACATCAACAGCAACTGCCATGGCGAATTTGATTCCAGCAGTCACGTTTGTGATAGCGGCAATTGTTGGACTCGAGAGTGTGGAGATGAGAAGTTCGAGGAGCATGGCTAAGATTGGAGGGACAATGGTTTGTGTGAGTGGGGCCATGTGCATGGCTTTTTTAAGAGGTCCAAAGCTTCTCAATGTCACACAAGGTATATTTTCATTGTAG | 507 | 44.38 | MGLVEEYLPVMAMFGIQVIYAVMTLLSRAALLKGMSPRVFVVYRQAIATLFISPIAYFSRSKSMRISLDLKSFSLIFLASFVGSTLNLNLYFEGVFLANTSTATAMANLIPAVTFVIAAIVGLESVEMRSSRSMAKIGGTMVCVSGAMCMAFLRGPKLLNVTQGIFSL | 168 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 41979676 | 41980602 | - | Lag0006392.1 | Lac6g2423 | 612192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac6g2423 | 168 | PANTHER | WAT1-RELATED PROTEIN | 11 | 160 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
| Lac6g2423 | 168 | Pfam | EamA-like transporter family | 10 | 126 | IPR000620 | GO:0016020(InterPro) | |
| Lac6g2423 | 168 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 43 | 152 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac6g2423 | Lac-Chr6:41979676 | Lac6g2427 | Lac-Chr6:42024535 | 3.50E-67 | dispersed | |
| Lac6g2423 | Lac-Chr6:41979676 | Lac6g2424 | Lac-Chr6:41984277 | 3.10E-63 | tandem |
Pathway information