Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2424 ATGGGTTTAGTTGAAGAATACTTGCCTGCAATGGCGATGTTTGGGATTCAAGTGACCTACGCCGTTGTGACTGTCATCTCCAAGGCTGCCCTCTCGAAGGGCATGAGCCCTAGAGTGTTCATTGTTTATAGACAGGCCATTGCCACTCTCTTCATTGCACCCATTGCTTATTTCTCCAGGCCTAAATCCAGGAGGGTATCTATGGACTTGAGGAGCTTTTTTCTTATCTTCATCGTTTCTCTTCTCGGTACAACAATGAACCTCAATTTTTATTTTGAGGGAGTTTCTTTAGCCGGCTCGTCACTGGCGACGGCGATGGCAAATCTCATTCCAGCGGTGACTTTTGTAATAGCAACGATTGTTGGAATGGAGAGTTTGAAAGTGAGAAGCTTGAGGAGCTTGGCAAAGATTGGAGGAACAGTGGTTTGTGTGAGTGGGGCAATGTGCATGGCTCTTCTTAGGGGTCCAAAGATTCTGAATGCAACAAAAGGTTTTGGTGTGGAAAGTGGAAGTGATGAGGCTTGGTTATTGGGTTGCTTGTGTCTCTTTGGGGGCTGTTGTTGCTGGTCAGTTTGGTTGATTTTGCAGGTACCAACAATAGAAAGGTATCCTGACAAGCTATCGTTATCAGCATGGATGTGTTTCTTTTCAACGATACAATCAGGCATTTTCACTCTATTGGTAGAGCCAACCAATCTTCAAACATGGAAAATCCATTCAAGTATTGAAGTTATTTGTTACCTCTTCTCAGGAATTTTTGGCTCAGGTGTTGCTTACTTTCTTCAAGCTTGGTGTGTTTCAAAAAGAGGCCCTGTCTTCTCTGCAGTGTTCAACCCTCTTTGCACCATTGTTACAACTATTTTGGCTGCTATATTTCTTCATGAGGAGATTTATATTGGAAGCTTGTTGGAGGGTGTGGCTGTGATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCAAAAGATTATATGAAGGAAGAAGACACAAAAAAGCAATGTGTTGAAGAAGAAGAAGATTGTTTCACCATCGCACGCCGTCGCTGA 1044 43.01 MGLVEEYLPAMAMFGIQVTYAVVTVISKAALSKGMSPRVFIVYRQAIATLFIAPIAYFSRPKSRRVSMDLRSFFLIFIVSLLGTTMNLNFYFEGVSLAGSSLATAMANLIPAVTFVIATIVGMESLKVRSLRSLAKIGGTVVCVSGAMCMALLRGPKILNATKGFGVESGSDEAWLLGCLCLFGGCCCWSVWLILQVPTIERYPDKLSLSAWMCFFSTIQSGIFTLLVEPTNLQTWKIHSSIEVICYLFSGIFGSGVAYFLQAWCVSKRGPVFSAVFNPLCTIVTTILAAIFLHEEIYIGSLLEGVAVIIGLYIVLWGKAKDYMKEEDTKKQCVEEEEDCFTIARRR 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 41984277 41987432 - Lag0006393.1 Lac6g2424 612193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2424 347 Pfam EamA-like transporter family 177 316 IPR000620 GO:0016020(InterPro)
Lac6g2424 347 Pfam EamA-like transporter family 12 138 IPR000620 GO:0016020(InterPro)
Lac6g2424 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
Lac6g2424 347 PANTHER WAT1-RELATED PROTEIN 11 328 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac6g2424 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 212 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0461 Lac-Chr6:3765178 Lac6g2424 Lac-Chr6:41984277 1.00E-53 dispersed
Lac6g2424 Lac-Chr6:41984277 Lac8g1680 Lac-Chr8:34915837 4.00E-57 dispersed
Lac6g2424 Lac-Chr6:41984277 Lac6g2427 Lac-Chr6:42024535 8.10E-151 proximal
Lac6g2423 Lac-Chr6:41979676 Lac6g2424 Lac-Chr6:41984277 3.10E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2424 - - - 0.0