Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2512 ATGGAGGGAAATATTACAGCAATCTTGGGAATGATCGTGTTGCAAGTGTGCTACGCTGCTTTAAACATCATCTCCAAGCTCGCCATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTACAGACAGATTTTTGGCACTTTAGCCATTGCTCCTTTTGCTTTTTTCACTGAAAGGAAAACGAGGCCGAGGATTACTTTTCCTGTTCTGGTTCAGATTCTGCTGTGTTCCTTATCAGGAGCAACAGGAAACCAGATATTCTTCTTTGTTGGGTTGAAGTACACAAGCCCAACAGTTTCAAGTGCTATGACCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGCCTGGTTTTGCAAAGGTAACAGGGACAATTTTGTGTGTATGTGGAGCAATGCTGCTGTCTTTCTACCATGGACACACCATTGGCTTGGCTGAATCCAAAATTCACTGGCCATATGTTGAGAGATTGAAGGAAACGACTGCGAACCGTCACGGAAACCGTGTCCTCGGCTCGATTTTGTTGCTTTGTGGTGCTTTTGCTTGGGCATTATGGTTCGTGATCCAAGCAAGATTGAGTGTCAAGTTTAAAGCTCCCTACACAAGTACCACATTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTGATTTCAGAACACAACATTGCTGCTTGGTCTTTGAAGAGTACGATTCGACTCGTCGCAGCTCTTTACACGGGAGTTGTGTGCTCTGGATTGACATTTAGCATCACTTCATGGATTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCACCCCTTTAATGCTTATCATTGTGGCCATTCTCAGCTGGGCTCTTCTCCACGAACAACTCTACGTCGGAACAGGTAGTTTAACGAACGTCGGTTTTTTCTCCAACAGTGTTATTGGCTCTATTATGGTCATCATTGGGCTTTATGCTGTGCTATGGGGAAAGTCCAAAGAGATGAAGCTAGAAGATGACAACATGGAAAAGCCAACAACAGAGAAGCCAAATGGAAATCATAATATTGATGAGAAAGATGACATGGAATTGCAAATCACACACATCAAATGA 1128 43.09 MEGNITAILGMIVLQVCYAALNIISKLAMQSGMNPLVLLTYRQIFGTLAIAPFAFFTERKTRPRITFPVLVQILLCSLSGATGNQIFFFVGLKYTSPTVSSAMTNVLPAATFILAVLFRQESVRIKTKPGFAKVTGTILCVCGAMLLSFYHGHTIGLAESKIHWPYVERLKETTANRHGNRVLGSILLLCGAFAWALWFVIQARLSVKFKAPYTSTTLLCFMAFFQCGLIAVISEHNIAAWSLKSTIRLVAALYTGVVCSGLTFSITSWIIQRKGPLYVSIFTPLMLIIVAILSWALLHEQLYVGTGSLTNVGFFSNSVIGSIMVIIGLYAVLWGKSKEMKLEDDNMEKPTTEKPNGNHNIDEKDDMELQITHIK 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 42916749 42919097 + Lag0006481.1 Lac6g2512 612281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2512 375 MobiDBLite consensus disorder prediction 345 365 - -
Lac6g2512 375 PANTHER WAT1-RELATED PROTEIN 10 347 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac6g2512 375 Pfam EamA-like transporter family 183 314 IPR000620 GO:0016020(InterPro)
Lac6g2512 375 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020(InterPro)
Lac6g2512 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
Lac6g2512 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0392 Lac-Chr5:4123821 Lac6g2512 Lac-Chr6:42916749 9.20E-30 dispersed
Lac6g2512 Lac-Chr6:42916749 Lac8g1099 Lac-Chr8:23484287 6.00E-59 dispersed
Lac3g3041 Lac-Chr3:48667657 Lac6g2512 Lac-Chr6:42916749 3.20E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2512 - - - 0.0