Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2717 ATGAAGACTAAACCAACAAAACGATGGAATGAGCTAGGCAATGGAGGTATAGGATATGTTTGGTCAATTTGTGAAGGGAGTGTTGAAGAAGAATGGAGGCACTCAGTTGCACCTATTCCAGCCGATAAACTTGAGAAGGCTCTGCAAGCAACAGATGATGAGCTGGAGTTAACTCAAGATGCTAATGTTCTACCACCTTCAGGGGAGTTGAAGTCTGACTCAAATATCTCAGATGGTGATGATAACGAAGACTCTAGAGATGACTCAATCCACTTTGAGAAAGAGGTCGAAGCAACGTTTCTGAGGGCTGTGCATGAAAATATTAAAGTGGACAATGTAATTTTGGAAGTGAACTCATTGCGGTTGTCATATAATAAGGTGGCTGCAGACTGTGCAGGAGCAATATTTTATTCTCTGATGAAATTTGCCTTAGATTCTCCTCATGGTTCATCTGGCGAACTACTGCAAAATACTACAAATATAATTACGAAATGGAAAAAACTTTTGAAGTACTACCTATCTGACATGGATGAAGAGATTGAAGTGATATTAAAATTTGAAGAGATATGCCTGGAATCCGCCAAGGAATTTACTCCACATTTTACCAAGATTTTGTGTCATCTATATGACCAAGAAATCATTCAAGAAGATGCTATTCTGAGGTGGGACGACGAGAAAAAAGAAGCGGATGATTCGGATAAACTTTTTGTTAAGCAGGCCGAGAAATTCATTGAATGGTTAAGAGTTGCATCAGAAGAGGAAGATGAAGAAGAGGAAGAATAG 783 39.08 MKTKPTKRWNELGNGGIGYVWSICEGSVEEEWRHSVAPIPADKLEKALQATDDELELTQDANVLPPSGELKSDSNISDGDDNEDSRDDSIHFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKVAADCAGAIFYSLMKFALDSPHGSSGELLQNTTNIITKWKKLLKYYLSDMDEEIEVILKFEEICLESAKEFTPHFTKILCHLYDQEIIQEDAILRWDDEKKEADDSDKLFVKQAEKFIEWLRVASEEEDEEEEE 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 44928858 44935330 + Lag0006686.1 Lac6g2717 612486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2717 260 MobiDBLite consensus disorder prediction 58 87 - -
Lac6g2717 260 SUPERFAMILY ARM repeat 92 248 IPR016024 -
Lac6g2717 260 Gene3D - 79 258 - -
Lac6g2717 260 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 260 IPR051956 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0031369(PANTHER)
Lac6g2717 260 SMART 542_3 166 253 IPR003307 GO:0005515(InterPro)
Lac6g2717 260 Coils Coil 41 61 - -
Lac6g2717 260 ProSiteProfiles W2 domain profile. 86 257 IPR003307 GO:0005515(InterPro)
Lac6g2717 260 FunFam Translation initiation factor eIF-2B epsilon subunit 82 258 - -
Lac6g2717 260 CDD W2_eIF2B_epsilon 87 251 IPR044123 GO:0005085(InterPro)|GO:0031369(InterPro)
Lac6g2717 260 Pfam eIF4-gamma/eIF5/eIF2-epsilon 178 257 IPR003307 GO:0005515(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2717 K03240 - csv:101217025 419.853