Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2758 ATGGACACCATGGGAGCTTTAGCCTTGGCAACTGAGCTGCCCACCGACGATCTCATGACGAAAACGCCGGTCGGTCGATCGGAGCCATTGGTGACGAAAGTCATGTGGAGGAACCTCATTGCTCAGGCTGTGTATCAGGTGACAGTCTTGCTGGTTTTGGAATTCAAAGGAACATCCATCTTCAATGTGAATGAAAAGGTTAAGAGCACACTCATCTTCAACACTTTTGTTCTATGCCAAATCTTCAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAACATATTTGAAGGGCTACACAAAAGCAAGCTCTTTTTGGCAATAATTCTGATAACCTTAGCTTTTCAAGTGGTAATGGTTGAGCTTCTGGGAAGGTTTGCCAATACAGAGAGGTTGAATTGGGGCCAGTGGGGTGCATGTGTTGGCATTGCAGCTTTGTCTTGGCCAATTGGATGGCTCTCTAAGTTAATACCCGTTTCTGTCCATAGGACCCGTTTGGAATGA 504 45.63 MDTMGALALATELPTDDLMTKTPVGRSEPLVTKVMWRNLIAQAVYQVTVLLVLEFKGTSIFNVNEKVKSTLIFNTFVLCQIFNEFNARKLEKKNIFEGLHKSKLFLAIILITLAFQVVMVELLGRFANTERLNWGQWGACVGIAALSWPIGWLSKLIPVSVHRTRLE 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 45312903 45313406 - Lag0006727.1 Lac6g2758 612527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2758 167 PANTHER CATION TRANSPORTING ATPASE 1 160 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Lac6g2758 167 Gene3D - 1 159 - -
Lac6g2758 167 Pfam Cation transporting ATPase, C-terminus 1 157 IPR006068 -
Lac6g2758 167 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 161 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2758 Lac-Chr6:45312903 Lac8g2014 Lac-Chr8:38602625 1.20E-38 dispersed
Lac6g2758 Lac-Chr6:45312903 Lac2g0394 Lac-Chr2:2889004 9.30E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2758 K01537 - csv:101218531 273.092