Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac6g2832 ATGATGTTTATGCAACAATGTAAGCGGGAAATCTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCACATCCGGAGGCAATATTACATATGAGGGTCGTTTTGAGATTGTTTCATTATGCGGATCTTATGTACGGACCGACATCGGAGGAAAGACTGGTGGTCTCAGTGTATGTTTGTCGAGTTCTGATGGCCATATAATAGGAGGGGGAGTTGGTGGACCGTTGAAGGCTGCTGGACCCGTGCAGGTTATTGTTGGTACCTTTGTAATCGACCCGAAGAAGGAAGTTGGTGGAGGTATTAAAGGTGATGCATCTGCTGGCAAGTTGCCCTCACCTATTGGTGGGACATCGATGTCAAATCTACGCTATGGCTCGAACATCGACTCGGGAGGTAATCAAGTCAGGGGAAATGATGAGCACCAAGGTATTGGGGAGAGTCATTTCTTGCTTCAGCCCCGGGGCGTGAATCTGACATCTCCGCGATCTACGGACTGGAGGATGGGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACGCATCATTCTCCCGAAAACGGAGATTACGATCAGATTCCCGATTGA 612 48.37 MMFMQQCKREICILSASGSISNASLRQPATSGGNITYEGRFEIVSLCGSYVRTDIGGKTGGLSVCLSSSDGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGIKGDASAGKLPSPIGGTSMSNLRYGSNIDSGGNQVRGNDEHQGIGESHFLLQPRGVNLTSPRSTDWRMGLDATNTAYDLTGRTHHSPENGDYDQIPD 203
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 45956472 45957649 - Lag0006801.1 Lac6g2832 612601
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac6g2832 203 CDD DUF296 1 95 IPR005175 -
Lac6g2832 203 MobiDBLite consensus disorder prediction 184 203 - -
Lac6g2832 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 110 IPR039605 GO:0003680(InterPro)
Lac6g2832 203 ProSiteProfiles PPC domain profile profile. 1 120 IPR005175 -
Lac6g2832 203 Gene3D - 1 105 - -
Lac6g2832 203 SUPERFAMILY AF0104/ALDC/Ptd012-like 5 96 - -
Lac6g2832 203 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 95 IPR005175 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2832 Lac-Chr6:45956472 Lac7g0322 Lac-Chr7:2496090 6.90E-25 dispersed
Lac6g2829 Lac-Chr6:45927148 Lac6g2832 Lac-Chr6:45956472 1.20E-17 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac6g2832 - - - 0.0