Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac6g2832 | ATGATGTTTATGCAACAATGTAAGCGGGAAATCTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCACATCCGGAGGCAATATTACATATGAGGGTCGTTTTGAGATTGTTTCATTATGCGGATCTTATGTACGGACCGACATCGGAGGAAAGACTGGTGGTCTCAGTGTATGTTTGTCGAGTTCTGATGGCCATATAATAGGAGGGGGAGTTGGTGGACCGTTGAAGGCTGCTGGACCCGTGCAGGTTATTGTTGGTACCTTTGTAATCGACCCGAAGAAGGAAGTTGGTGGAGGTATTAAAGGTGATGCATCTGCTGGCAAGTTGCCCTCACCTATTGGTGGGACATCGATGTCAAATCTACGCTATGGCTCGAACATCGACTCGGGAGGTAATCAAGTCAGGGGAAATGATGAGCACCAAGGTATTGGGGAGAGTCATTTCTTGCTTCAGCCCCGGGGCGTGAATCTGACATCTCCGCGATCTACGGACTGGAGGATGGGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACGCATCATTCTCCCGAAAACGGAGATTACGATCAGATTCCCGATTGA | 612 | 48.37 | MMFMQQCKREICILSASGSISNASLRQPATSGGNITYEGRFEIVSLCGSYVRTDIGGKTGGLSVCLSSSDGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGIKGDASAGKLPSPIGGTSMSNLRYGSNIDSGGNQVRGNDEHQGIGESHFLLQPRGVNLTSPRSTDWRMGLDATNTAYDLTGRTHHSPENGDYDQIPD | 203 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 45956472 | 45957649 | - | Lag0006801.1 | Lac6g2832 | 612601 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac6g2832 | 203 | CDD | DUF296 | 1 | 95 | IPR005175 | - | |
| Lac6g2832 | 203 | MobiDBLite | consensus disorder prediction | 184 | 203 | - | - | |
| Lac6g2832 | 203 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 1 | 110 | IPR039605 | GO:0003680(InterPro) | |
| Lac6g2832 | 203 | ProSiteProfiles | PPC domain profile profile. | 1 | 120 | IPR005175 | - | |
| Lac6g2832 | 203 | Gene3D | - | 1 | 105 | - | - | |
| Lac6g2832 | 203 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 5 | 96 | - | - | |
| Lac6g2832 | 203 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 3 | 95 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac6g2832 | Lac-Chr6:45956472 | Lac7g0322 | Lac-Chr7:2496090 | 6.90E-25 | dispersed | |
| Lac6g2829 | Lac-Chr6:45927148 | Lac6g2832 | Lac-Chr6:45956472 | 1.20E-17 | proximal |
Pathway information