Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0043 ATGGAGAGGATTCCAGAGTCAAAAGCGCTTCCACTATTACTGCCCATAGAGATGCTTCCAGAATCAAAAGTACGTCCGGGAAAGTTTTGTGTTTTAGATGATATACCAAAAGCACATATGGCCTCTGCCAAGCAAGCTGGCCAATGCCATTGGTCGAATATGCACTCAGCTAAGGTAAGAGAAGTGGGAAGATCTATTGGACAAGTATTTCAAGATCTAGAAGTTTCTGCACCTGTACGGACATTGAAGGGAAAATCCTCTTTTATGGGGCAGGAAGAACCTAAACGTGATGCCGCATTAAAGGGTAGTAGCAATTTAATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGTGCTAGCCACCCACCAGAGCCCGTGGATATGGATCTTATGAGAACAGTTTATGTACCCATAGGGAAAAATAAACCTGATGCTGGCTGTTTGATGAAGAGTTTTTCAGTGAAGGGCCCTTTTCTTGAGGATCTTTCAATCAGGGTTCCAGCCAAGAAACCAAGTCCAGCTGTTCTCTCCCCTGCAGAAAGCTTAGTTGATGAACCGCATGACTTGGGTGTTTTGTCTTCCCCCTTTTCAATTCCTCGTGCATCGCAAAATACAGAGACCTCTCTCCTTCCTCCAGATTCTGAGGAGAAGGAGTGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTAAGTCCACACAGTAGCATTGATAGTAGTGGAGTTGTCACAGCTATGAGCATTGTTAATAGCTGTGCTAGCACATATCGAAGTGATGGAATGGTTAGTGTTGAAAGAAACTGTGAAAGTACAAAAGGAAGCATTAGAGGGGACTCCCTCGAGAGTGCAAAAACAAGTATTAGTCGTGCTAGTGACAGCAGTGGTCTTAGTGATGATAGTAGTTGGAGCAACATTACAGGAAGCGCTAACAAGCCCCACAAAGGAAATGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAGCCATTTTAGACTGCTGAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTATCTCTCAGAGCTAAGTGGGACTCGCTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCGCTTGCTATCAGGAAGAAGTTAACGAGAGCTCAGACGGAAAGAGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACTTTGTACACCCATTTTGAGACTGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCAGGGGGAGACCTGCACACTTTGAGGCAACGACAACCAGGGAAACACTTCTCTGAATATGCTGCAAGGTACGATGAATACTTTAATGAGGAAAATACAATAAACCACAGTCCTCTAGTGACTCCTTGA 1380 43.99 MERIPESKALPLLLPIEMLPESKVRPGKFCVLDDIPKAHMASAKQAGQCHWSNMHSAKVREVGRSIGQVFQDLEVSAPVRTLKGKSSFMGQEEPKRDAALKGSSNLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPIGKNKPDAGCLMKSFSVKGPFLEDLSIRVPAKKPSPAVLSPAESLVDEPHDLGVLSSPFSIPRASQNTETSLLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCASTYRSDGMVSVERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSSWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARYDEYFNEENTINHSPLVTP 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 403166 404545 - Lag0020560.1 Lac7g0043 612944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0043 459 MobiDBLite consensus disorder prediction 104 123 - -
Lac7g0043 459 Pfam Protein kinase domain 338 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0043 459 FunFam Serine/threonine-protein kinase D6PK-like 335 420 - -
Lac7g0043 459 SUPERFAMILY Protein kinase-like (PK-like) 319 440 IPR011009 -
Lac7g0043 459 MobiDBLite consensus disorder prediction 266 310 - -
Lac7g0043 459 PANTHER FLIPPASE KINASE 1-RELATED 206 441 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lac7g0043 459 Gene3D Phosphorylase Kinase; domain 1 331 454 - -
Lac7g0043 459 MobiDBLite consensus disorder prediction 266 314 - -
Lac7g0043 459 ProSiteProfiles Protein kinase domain profile. 337 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0043 459 SMART serkin_6 337 456 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0043 459 MobiDBLite consensus disorder prediction 193 216 - -
Lac7g0043 459 MobiDBLite consensus disorder prediction 195 209 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0043 Lac-Chr7:403166 Lac8g0213 Lac-Chr8:2395477 9.60E-67 dispersed
Lac7g0043 Lac-Chr7:403166 Lac1g3129 Lac-Chr1:51633641 4.20E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86302 PF00069 Pkinase 1.50E-14 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0043 - - - 0.0