Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0043 | ATGGAGAGGATTCCAGAGTCAAAAGCGCTTCCACTATTACTGCCCATAGAGATGCTTCCAGAATCAAAAGTACGTCCGGGAAAGTTTTGTGTTTTAGATGATATACCAAAAGCACATATGGCCTCTGCCAAGCAAGCTGGCCAATGCCATTGGTCGAATATGCACTCAGCTAAGGTAAGAGAAGTGGGAAGATCTATTGGACAAGTATTTCAAGATCTAGAAGTTTCTGCACCTGTACGGACATTGAAGGGAAAATCCTCTTTTATGGGGCAGGAAGAACCTAAACGTGATGCCGCATTAAAGGGTAGTAGCAATTTAATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGTGCTAGCCACCCACCAGAGCCCGTGGATATGGATCTTATGAGAACAGTTTATGTACCCATAGGGAAAAATAAACCTGATGCTGGCTGTTTGATGAAGAGTTTTTCAGTGAAGGGCCCTTTTCTTGAGGATCTTTCAATCAGGGTTCCAGCCAAGAAACCAAGTCCAGCTGTTCTCTCCCCTGCAGAAAGCTTAGTTGATGAACCGCATGACTTGGGTGTTTTGTCTTCCCCCTTTTCAATTCCTCGTGCATCGCAAAATACAGAGACCTCTCTCCTTCCTCCAGATTCTGAGGAGAAGGAGTGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTAAGTCCACACAGTAGCATTGATAGTAGTGGAGTTGTCACAGCTATGAGCATTGTTAATAGCTGTGCTAGCACATATCGAAGTGATGGAATGGTTAGTGTTGAAAGAAACTGTGAAAGTACAAAAGGAAGCATTAGAGGGGACTCCCTCGAGAGTGCAAAAACAAGTATTAGTCGTGCTAGTGACAGCAGTGGTCTTAGTGATGATAGTAGTTGGAGCAACATTACAGGAAGCGCTAACAAGCCCCACAAAGGAAATGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAGCCATTTTAGACTGCTGAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTATCTCTCAGAGCTAAGTGGGACTCGCTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCGCTTGCTATCAGGAAGAAGTTAACGAGAGCTCAGACGGAAAGAGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACTTTGTACACCCATTTTGAGACTGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCAGGGGGAGACCTGCACACTTTGAGGCAACGACAACCAGGGAAACACTTCTCTGAATATGCTGCAAGGTACGATGAATACTTTAATGAGGAAAATACAATAAACCACAGTCCTCTAGTGACTCCTTGA | 1380 | 43.99 | MERIPESKALPLLLPIEMLPESKVRPGKFCVLDDIPKAHMASAKQAGQCHWSNMHSAKVREVGRSIGQVFQDLEVSAPVRTLKGKSSFMGQEEPKRDAALKGSSNLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPIGKNKPDAGCLMKSFSVKGPFLEDLSIRVPAKKPSPAVLSPAESLVDEPHDLGVLSSPFSIPRASQNTETSLLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCASTYRSDGMVSVERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSSWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARYDEYFNEENTINHSPLVTP | 459 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 403166 | 404545 | - | Lag0020560.1 | Lac7g0043 | 612944 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0043 | 459 | MobiDBLite | consensus disorder prediction | 104 | 123 | - | - | |
Lac7g0043 | 459 | Pfam | Protein kinase domain | 338 | 439 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g0043 | 459 | FunFam | Serine/threonine-protein kinase D6PK-like | 335 | 420 | - | - | |
Lac7g0043 | 459 | SUPERFAMILY | Protein kinase-like (PK-like) | 319 | 440 | IPR011009 | - | |
Lac7g0043 | 459 | MobiDBLite | consensus disorder prediction | 266 | 310 | - | - | |
Lac7g0043 | 459 | PANTHER | FLIPPASE KINASE 1-RELATED | 206 | 441 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Lac7g0043 | 459 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 454 | - | - | |
Lac7g0043 | 459 | MobiDBLite | consensus disorder prediction | 266 | 314 | - | - | |
Lac7g0043 | 459 | ProSiteProfiles | Protein kinase domain profile. | 337 | 459 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g0043 | 459 | SMART | serkin_6 | 337 | 456 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g0043 | 459 | MobiDBLite | consensus disorder prediction | 193 | 216 | - | - | |
Lac7g0043 | 459 | MobiDBLite | consensus disorder prediction | 195 | 209 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac7g0043 | Lac-Chr7:403166 | Lac8g0213 | Lac-Chr8:2395477 | 9.60E-67 | dispersed | |
Lac7g0043 | Lac-Chr7:403166 | Lac1g3129 | Lac-Chr1:51633641 | 4.20E-62 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
86302 | PF00069 | Pkinase | 1.50E-14 | CL0016 | Lac | PK |
Pathway information
