Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0095 ATGAACGTGAAAGCTCCGGCGACGAGGACTCGTGTGGGGAAGTACGAGCTCGGTAAAACGCTTGGCGAGGGCAGTTTTGCTAAGGTCAAGTTCGCGAAGAACGTTGAGAATGGTGATTATGTCGCCATCAAGATTCTTGATCGCGGACAAGTTCTTCGACACAAGATGGTCGAACAGATTAAAAGAGAGATATCGACTCTGAAATTGATCAAGCATCCGAATGTTGTTAAGATTTATGAGGTTATGGCAAGCAAATCAAAAATCTACATTGTTCTTGAGTTTGTGGATGGAGGCGAGCTCTTTGACAAAATAGCTGCAAAGGGAAGGCTTAAAGAGGATGAGGCAAGGAAATATTTCCATCAGCTTATTAATGCTGTAGATTACTGCCATAGTAGAGGCGTGTTCCATCGAGATTTGAAGCCTGAAAATCTTCTTCTGGACAAACATGATGTTCTTAAAGTATCTGATTTTGGATTGAGTGCATTTTCGCAGCAAGTTCAAGGGGACGGTCTTCTTCACACTGCCTGTGGGACTCCGAACTACGTAGCCCCCGAGGTTTTCCATGATAAAGGTTATGATGGTACATCATCCGATATTTGGTCATGTGGGGTCATTCTCTTCGTTCTTATGGCTGGCTTCTTGCCTTTTGATGAAGAAAATCTAATGTGTTTGTATAGAAAAATTTCCAAGGCTGATTTCTGCTTTCCTTCATGGTTCTCAAATGGTGCTAGAAAATTAATTCGTCGCATTCTTGATCCAAACCCTCTTACTCGAATTACGATAGCTCAAATTCAAGAAGATGAATGGTTCAAGAAGGGCTACACGGCTGCTCATTTTGAAGTGGAAGAGGATATAACTCTCGACGATGTCGATGCCGCTTTTAGCAGCTCAAGGGAACATCTTGTAACCGAAAGAAAAGAGAAGCCAGTGTCCATGAATGCATTTGAGCTCATCTCGAGGTCACCAGGCTTCAGTCTTGATAATCTATTTGAGAAGCAGAAGGCTGTTGTGAAGAGCGAGACTCGTTTTACGTCGCAAAGCCCTGCGAACGAGATCATGTTGAAGATTGAAGAAACTGCAAAACCTATGGGATTCAACGTTCGAACACGGGACTACAAGATGAAGTTGAAAGGTGACAAGACTGGTAGGAAAGGACATCTCTCCATAGCTACTGAGGTGTTTGAGGTGGCTCCTTCCTTGCATATGGTGGAGCTTCGAAAAACTGGTGGCGATACGCTTGAGTTTCACAAGTTCTACAAAAGTTTCTCTTCAGGATTAAAAGACATAATGTGGAGAACTGATGAAAATACTGTAGAAGGGAGCTAA 1326 42.99 MNVKAPATRTRVGKYELGKTLGEGSFAKVKFAKNVENGDYVAIKILDRGQVLRHKMVEQIKREISTLKLIKHPNVVKIYEVMASKSKIYIVLEFVDGGELFDKIAAKGRLKEDEARKYFHQLINAVDYCHSRGVFHRDLKPENLLLDKHDVLKVSDFGLSAFSQQVQGDGLLHTACGTPNYVAPEVFHDKGYDGTSSDIWSCGVILFVLMAGFLPFDEENLMCLYRKISKADFCFPSWFSNGARKLIRRILDPNPLTRITIAQIQEDEWFKKGYTAAHFEVEEDITLDDVDAAFSSSREHLVTERKEKPVSMNAFELISRSPGFSLDNLFEKQKAVVKSETRFTSQSPANEIMLKIEETAKPMGFNVRTRDYKMKLKGDKTGRKGHLSIATEVFEVAPSLHMVELRKTGGDTLEFHKFYKSFSSGLKDIMWRTDENTVEGS 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 797547 801646 - Lag0020612.1 Lac7g0095 612996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0095 441 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Lac7g0095 441 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0095 441 CDD STKc_SnRK3 14 269 - -
Lac7g0095 441 Gene3D Transferase(Phosphotransferase) domain 1 95 277 - -
Lac7g0095 441 CDD CIPK_C 313 428 - -
Lac7g0095 441 Pfam NAF domain 309 368 IPR004041 GO:0007165(InterPro)
Lac7g0095 441 FunFam Non-specific serine/threonine protein kinase 306 432 - -
Lac7g0095 441 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0095 441 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Lac7g0095 441 SUPERFAMILY Protein kinase-like (PK-like) 12 302 IPR011009 -
Lac7g0095 441 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Lac7g0095 441 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 416 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Lac7g0095 441 FunFam Non-specific serine/threonine protein kinase 8 310 - -
Lac7g0095 441 SMART serkin_6 15 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0095 441 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165(InterPro)
Lac7g0095 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0095 441 Gene3D Kinase associated domain 1, KA1 306 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3541 Lac-Chr1:54641919 Lac7g0095 Lac-Chr7:797547 1.90E-176 dispersed
Lac7g0095 Lac-Chr7:797547 Lac9g2932 Lac-Chr9:47112424 1.30E-166 dispersed
Lac7g0095 Lac-Chr7:797547 Lac10g1109 Lac-Chr10:9128808 3.60E-180 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86303 PF00069 Pkinase 1.00E-71 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0095 - - - 0.0