Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0103 ATGGCTTCGGATCCCAAGGTTTTCGTCTTCGATGAAGTGGCTAAACACAATCACCAGCGGGATTGTTGGATTATAATCTCTGGAAAGGTGTATGATGTCACCCCTTTTCTGGAAGAACATCCTGGAGGTGATGAGGTTTTGATATTAGCTGCTGAAAAAGATGCAACTGATGATTTTGAAACTGTGGGTCACAGTCTATCTGCAGTAGAGCAAATGGAAAAATATTATATTGGCAATATTGACATGTCTACTGTTCCGAAGCCAATTGATTATCGACCACCTGCATCGCAATCAGCAACAAAGTCTGCTGAATCTTCAGGATCTCTGCTAAAAGTACTGCAAATTCTGGTTCCCCTGCTGATTTTGGGTGTGGCATTTTATCTGCAATTCTATGGCAAGAAACAGTAA 408 41.42 MASDPKVFVFDEVAKHNHQRDCWIIISGKVYDVTPFLEEHPGGDEVLILAAEKDATDDFETVGHSLSAVEQMEKYYIGNIDMSTVPKPIDYRPPASQSATKSAESSGSLLKVLQILVPLLILGVAFYLQFYGKKQ 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 870251 871752 - Lag0020620.1 Lac7g0103 613004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0103 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Lac7g0103 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Lac7g0103 135 SMART Cyt_b5_2 8 81 IPR001199 -
Lac7g0103 135 Gene3D - 1 86 IPR036400 -
Lac7g0103 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 94 IPR036400 -
Lac7g0103 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Lac7g0103 135 PANTHER CYTOCHROME B5 5 132 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Lac7g0103 135 FunFam Cytochrome b5 type B 2 85 - -
Lac7g0103 135 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Lac7g0103 135 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Lac7g0103 135 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Lac7g0103 135 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g0070 Lac-Chr4:1259308 Lac7g0103 Lac-Chr7:870251 5.00E-40 dispersed
Lac7g0103 Lac-Chr7:870251 Lac7g0465 Lac-Chr7:3688907 4.30E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0103 K23490 - csv:101205000 225.713