Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0103 | ATGGCTTCGGATCCCAAGGTTTTCGTCTTCGATGAAGTGGCTAAACACAATCACCAGCGGGATTGTTGGATTATAATCTCTGGAAAGGTGTATGATGTCACCCCTTTTCTGGAAGAACATCCTGGAGGTGATGAGGTTTTGATATTAGCTGCTGAAAAAGATGCAACTGATGATTTTGAAACTGTGGGTCACAGTCTATCTGCAGTAGAGCAAATGGAAAAATATTATATTGGCAATATTGACATGTCTACTGTTCCGAAGCCAATTGATTATCGACCACCTGCATCGCAATCAGCAACAAAGTCTGCTGAATCTTCAGGATCTCTGCTAAAAGTACTGCAAATTCTGGTTCCCCTGCTGATTTTGGGTGTGGCATTTTATCTGCAATTCTATGGCAAGAAACAGTAA | 408 | 41.42 | MASDPKVFVFDEVAKHNHQRDCWIIISGKVYDVTPFLEEHPGGDEVLILAAEKDATDDFETVGHSLSAVEQMEKYYIGNIDMSTVPKPIDYRPPASQSATKSAESSGSLLKVLQILVPLLILGVAFYLQFYGKKQ | 135 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 870251 | 871752 | - | Lag0020620.1 | Lac7g0103 | 613004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0103 | 135 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
Lac7g0103 | 135 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 11 | 80 | IPR001199 | - | |
Lac7g0103 | 135 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Lac7g0103 | 135 | Gene3D | - | 1 | 86 | IPR036400 | - | |
Lac7g0103 | 135 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 4 | 94 | IPR036400 | - | |
Lac7g0103 | 135 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Lac7g0103 | 135 | PANTHER | CYTOCHROME B5 | 5 | 132 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Lac7g0103 | 135 | FunFam | Cytochrome b5 type B | 2 | 85 | - | - | |
Lac7g0103 | 135 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Lac7g0103 | 135 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Lac7g0103 | 135 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Lac7g0103 | 135 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac4g0070 | Lac-Chr4:1259308 | Lac7g0103 | Lac-Chr7:870251 | 5.00E-40 | dispersed | |
Lac7g0103 | Lac-Chr7:870251 | Lac7g0465 | Lac-Chr7:3688907 | 4.30E-39 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g0103 | K23490 | - | csv:101205000 | 225.713 |