Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0145 ATGATAATATATAGGCTTGAATATCCACATCTCTTTGTCAACGATGGAGCTAAACAAAAGAATAGGATGCAGGGAGGATTTTTGGATCCACAGAAGCCATTTCTTCAGCAATGGAACAAGATATTTGTGCTTTCATGTGTCATAGCAGTAGCTGTGGACCCTCTCTTCTTTTACATCCCAGTGTTTGATAAGCAACATCAATGCCTAACCATGGACCGACGCCTCATGATCATTGCTTGTGTTCTTCGTTCATTCATTGACTTATTTTATCTACTTCACATGATCTTTGAATTTCGAACAGGTTTTCTGCCTTCTTCTTTACCCTCACTTCGAAGGACTGAATTAATTGAAGATCTAGCAACTATAGCAAAGAGATACCTCTTTTCAAACTTCACGATTGATAGTTTATCCATTCTCCCAGTGCCTCGGCTTTTGGTATTAGTTATTGTACCTGCATTGAGAGGCCCGATTCCACTGAAGACAAAGGACTTCATAAAGATTGCAGTTCTTTTGCAATATATTCCAAGGCTTCTCCGAATTTATCCATTATACAGAGAAGTAACCAGAACTTCTGGCATACTAACAGAAAGAGCCTGGACTGGAGCTGCCTTCAATCTCCTTATTTATATGCTAGCTAGCCATGTAGTTGGTGCCCTTTGGTATTTGCTTTCCGTAGATCAACAAGCAAGATGCTGGTGCGAGGCATGTAGAAAAAATAACTGTACCGACAATTTCCTGTACTGTAGAGATCACAGCAGACAGTCATACCCGTTTATAGATGAGTATTGCTCTCATAAAGAGACTGAAGATGGCAATGCCTTCAACTTTGGGATGCATGTTGAAGCCCTTAAGTTCCATTTAACTGAGACGATGAGTTTTCGCCGCAAATTTGTTTATTCCTTCTGGTGGGCTCTGCGAAATGTCAGTTCTAGTGGACAAAACATCGAAGTAAGCGATTACATGGGGCAGGTTCTTTTTGCTGTCTTTATTGCCATCCTTGGTTTGGTTTTATTTGCGTCACTCATTAGCAACATTCAGACATATATGCAGTCAAGTACTGTTAGAGTAGAGCAGATGAGAATGAAACGAAGAGATACCGAGAATTGGATGGCGCATCGTATGCTCCCAAAGAAGTTGAGGCAACGTATTAGGCGATATAATCAGTACAAATGGCAGTCAAACAGGGGAGTTAATGAAGAGGAACTGGTCAATAATCTTCCTAAAGACCTTAGGAAAGACATCAAACGCCATCTTCACTATGATGTTTGCCGTAGTGTGCCATTGTTTGAGAACATGGATGAGCAAATGATGGAAGCAATGTACTGCTCTCATCAATGGAGAAACTGGGCAGCCTATAAAATACAGGAAGCTTGGCATGAGTACTGTGAAAGAAAGCAGAAGATGGGGGGTGGAGATGGTAGGTTTCGAGATGCATTGGCTAAAACAGTTGGTATCTCAGCATGCTTTGCTGCCAATCTGTTTGCATCTATATTCATATCCCATCTACTGCAAGCAGGACAGCCAGATCGACAGGAAACTACTCAACTCTCACGAGCGATGATGCTACCACCACCACCGAAGCCAGACGAGCAAGACTACACCATCTTGGATCTTTAA 1617 41.74 MIIYRLEYPHLFVNDGAKQKNRMQGGFLDPQKPFLQQWNKIFVLSCVIAVAVDPLFFYIPVFDKQHQCLTMDRRLMIIACVLRSFIDLFYLLHMIFEFRTGFLPSSLPSLRRTELIEDLATIAKRYLFSNFTIDSLSILPVPRLLVLVIVPALRGPIPLKTKDFIKIAVLLQYIPRLLRIYPLYREVTRTSGILTERAWTGAAFNLLIYMLASHVVGALWYLLSVDQQARCWCEACRKNNCTDNFLYCRDHSRQSYPFIDEYCSHKETEDGNAFNFGMHVEALKFHLTETMSFRRKFVYSFWWALRNVSSSGQNIEVSDYMGQVLFAVFIAILGLVLFASLISNIQTYMQSSTVRVEQMRMKRRDTENWMAHRMLPKKLRQRIRRYNQYKWQSNRGVNEEELVNNLPKDLRKDIKRHLHYDVCRSVPLFENMDEQMMEAMYCSHQWRNWAAYKIQEAWHEYCERKQKMGGGDGRFRDALAKTVGISACFAANLFASIFISHLLQAGQPDRQETTQLSRAMMLPPPPKPDEQDYTILDL 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1133298 1136715 - Lag0020662.1 Lac7g0145 613046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0145 538 Gene3D Helix hairpin bin 355 418 - -
Lac7g0145 538 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 18 440 - -
Lac7g0145 538 Pfam Ion transport protein 39 354 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lac7g0145 538 SUPERFAMILY cAMP-binding domain-like 357 448 IPR018490 -
Lac7g0145 538 Gene3D - 40 352 - -
Lac7g0145 538 SUPERFAMILY Voltage-gated potassium channels 29 350 - -
Lac7g0145 538 FunFam Cyclic nucleotide-gated ion channel 1 355 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0142 Lac-Chr7:1112196 Lac7g0145 Lac-Chr7:1133298 3.40E-204 dispersed
Lac7g0143 Lac-Chr7:1120462 Lac7g0145 Lac-Chr7:1133298 7.80E-227 dispersed
Lac7g0145 Lac-Chr7:1133298 Lac8g0435 Lac-Chr8:5586285 1.50E-106 dispersed
Lac7g0144 Lac-Chr7:1126311 Lac7g0145 Lac-Chr7:1133298 1.60E-37 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0145 K05391 - csv:101206492 618.231