Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0201 | ATGAAAATGGAAGTTGATTGGGATCTTCACGCCGTCGTCAGAGGCTACTCCGCCGTGTCTTCCGCCGCTTCCACCGCCGTCACAGCCGCCGTTCCCTCTTCTGACTTCTACTCTGTTCCTTCCATTTCCAATAACTCTATCCCTCTTGCTTTTGGTAGAGATCCAACGAACCAAACAAACCATTTATTCTCTCTTCAAGATCCATTTCAAGGACCCAATTGTAATTCCACTGAGGAATTGCATGAGCTTTTCAAACCCTTTTTTCACAAATCTCAACAGCCCTCTCCGCCGCCGTCTGCTCCGCCGCTTCTTTCTTCTCCGGCGGGTAAAATTCTGACCCATCAGAAACAGCAGCAGAACACCCATCTCCCCAAACAGCTCCATTCTTCCCCTGTTTCTGCCCCAAGATCCAAACGCCGGAAGAATCAGTTGAAGAAAGTTTGTCAAGTTCCGGCGGAGTCTCTGTCTTCGGACATTTGGGCTTGGCGAAAATATGGCCAAAAACCGATCAAAGGATCTCCATATCCAAGGGGATATTACAGATGTAGCAGTTCCAAGGGTTGCATGGCCCGAAAACAAGTCGAGAGGAACAGATCCGACCCCGGAATGTTCATAGTCACGTACACGGCGGAGCACAACCACCCGGCGCCGACTCACCGGAATTCCCTCGCCGGCTCCACCCGTCAAAAGCCCATCACGCCGACGCCCGCCGCCGCAGAACCCGGATCCGGAAAACCCGACCCGAAACAGCCCGGTTGCTCGTCGGAAGACCAAAGTACGATCACGGAGAGCAAAGAGGAAAAAGAGGAATTATTGGCCGAAGATGAAGAAGACGACGACCTGGGGGTCTCCGATTTGATCGTCAACGACGATTTCTATGTGGGTTTTGAAGAACTCGACAGTCCAATCGCCGACGACTGCTTTTCCGACCAGTTTCCGGCGAATTTCGAGCTTCCATGGCTGTTCAACAATGCCGCCGCCGCCGCCAGCAGCATTTAA | 999 | 52.35 | MKMEVDWDLHAVVRGYSAVSSAASTAVTAAVPSSDFYSVPSISNNSIPLAFGRDPTNQTNHLFSLQDPFQGPNCNSTEELHELFKPFFHKSQQPSPPPSAPPLLSSPAGKILTHQKQQQNTHLPKQLHSSPVSAPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCMARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGSTRQKPITPTPAAAEPGSGKPDPKQPGCSSEDQSTITESKEEKEELLAEDEEDDDLGVSDLIVNDDFYVGFEELDSPIADDCFSDQFPANFELPWLFNNAAAAASSI | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1573823 | 1575028 | - | Lag0020718.1 | Lac7g0201 | 613102 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0201 | 332 | MobiDBLite | consensus disorder prediction | 114 | 149 | - | - | |
Lac7g0201 | 332 | ProSiteProfiles | WRKY domain profile. | 151 | 217 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac7g0201 | 332 | Pfam | WRKY DNA -binding domain | 158 | 215 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac7g0201 | 332 | MobiDBLite | consensus disorder prediction | 114 | 133 | - | - | |
Lac7g0201 | 332 | SUPERFAMILY | WRKY DNA-binding domain | 154 | 217 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac7g0201 | 332 | MobiDBLite | consensus disorder prediction | 214 | 233 | - | - | |
Lac7g0201 | 332 | Gene3D | WRKY domain | 140 | 210 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac7g0201 | 332 | MobiDBLite | consensus disorder prediction | 269 | 284 | - | - | |
Lac7g0201 | 332 | FunFam | WRKY transcription factor 22 | 140 | 210 | - | - | |
Lac7g0201 | 332 | SMART | WRKY_cls | 156 | 216 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac7g0201 | 332 | MobiDBLite | consensus disorder prediction | 211 | 284 | - | - | |
Lac7g0201 | 332 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 7 | 271 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER) | |
Lac7g0201 | 332 | MobiDBLite | consensus disorder prediction | 88 | 107 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac7g0201 | Lac-Chr7:1573823 | Lac9g1320 | Lac-Chr9:30464887 | 1.10E-24 | dispersed | |
Lac10g1260 | Lac-Chr10:11067848 | Lac7g0201 | Lac-Chr7:1573823 | 6.60E-38 | transposed | |
Lac11g0079 | Lac-Chr11:698579 | Lac7g0201 | Lac-Chr7:1573823 | 5.40E-43 | transposed | |
Lac1g3622 | Lac-Chr1:55313147 | Lac7g0201 | Lac-Chr7:1573823 | 6.30E-37 | transposed | |
Lac5g2175 | Lac-Chr5:40326805 | Lac7g0201 | Lac-Chr7:1573823 | 9.40E-38 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
24118 | PF03106 | WRKY | 4.40E-25 | CL0274 | Lac | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g0201 | K13425 | - | csv:101217082 | 461.07 |