Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0210 ATGTCTGTTTATGATGCTGCATTTTTCAACACGGAGCTCTCTAAACCGACCTCCATTTTCGGCCTTCGTCTCTGGGTTGTAATCGGAATCTTAGTCGGAGCCTTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTCACTTCTCGCAAGCGGAATCGCCATAAGAACCAAATCCGTTTCCCTAAGTCCACAACCGACCATTCTCCTCCCGCCGTTTCTAAAGAGATCCAGGAAATCGTCCATCACGCGGTGCCGGATCATCACCACCATGTTCAGCCGGAAATTCATGTCGAGATCGGAAAATTGGAGCATCGGGTTGTTTTCTCTGACAGACCTTCTAGTGGTGAGAGCAGAGGCGCTGTGAGTGAAACTGCTTCTTTTGGATCTGGTACTGTTGGGCCTGAGGTTTCGCACTTGGGTTGGGGCAGATGGTATACTCTGAGAGAGCTCGAGGCGGCCACTAATGGCTTGTGTGAAGAGAACGTGATTGGAGAAGGTGGGTATGGGATCGTGTATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAACCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTGGAAGTTGAAGCAATTGGACGAGTAAGACACAAGAATCTTGTCAGATTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACGTTAACAATGGTAATCTAGACCAATGGCTTCACGGCGATGTTGGGGATGTGAGCCCCTTGACCTGGGAGATTCGTGTTAACATCATACTCGGAACAGCAAAGGGATTAGCTTATCTTCATGAGGGTCTTGAGCCAAAGGTTGTCCATCGTGATGTAAAGTCAAGCAACATACTGCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCAGAAAGGAGCTACGTGACAACTCGTGTAATGGGTACATTTGGCTATGTTGCACCCGAGTACGCTTGCACAGGAATGTTAAATGAGAAGAGTGATGTTTATAGTTTTGGAATTCTAATTATGGAGATAATTTCTGGGCGGAGCCCTGTTGATTATAGTAGACCCCAAGGAGAGGTAAATTTGGTGGATTGGTTGAAATCAATGGTTGGAGACAGAAAATCGGAGGAAGTTGTTGACCCCAAGTTGCCTGAGAAGCCTCCATCGAAAGCTCTCAAACGTGTTTTGCTGGTTGCTCTTCGGTGTGTCGATCCTGATGCAACGAAGAGGCCGAAAATGGGACATGTCATCCACATGCTTGAGGCAGATAATTTGCTGTGTAATGATGAGCAGCGAGTTGGTAGGGATTCTTCCCACTCAATTCAAGGCCATCAACATGAGAACCGGGCCGTTCCAAGACGAGTTAACAACCAGAAAGATGAAGGAACATCTTCTAATATAAGTGAAGGTGACAGTGATGGACACATTCAACAATCAACAAGTTTGGTGGAGACAACTCCAACTCCAACTCCTCCTTCATGTGCCCTTTTGCAATGTTCTGACTGGACCAGAATCAATTCTTTGGTTTATCTGCAACCATACACTGTCCTTTCAAGCACTTGCACTCTGAAACTGAATGCTTTTGGGAGCTCCTTCAAAACCCCTTATCCAAAGCTTGATTTTGGAGCAATGATTCAAACCTTTGATGTTTTGGTCGATGTTGTAGTATCTCAACTAGTTGAGCTCCCATCTTCTCCTTTCCACCACGCGAATTCAACGTTTTCTGGCTGCGATAATTTCTTAGAAATTTCCTTTGCTTTCTGGTTTCTGAATCTGATTTAG 1809 45.16 MSVYDAAFFNTELSKPTSIFGLRLWVVIGILVGALIVLALFLLSLCLTSRKRNRHKNQIRFPKSTTDHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGAVSETASFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLDQWLHGDVGDVSPLTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVDWLKSMVGDRKSEEVVDPKLPEKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLCNDEQRVGRDSSHSIQGHQHENRAVPRRVNNQKDEGTSSNISEGDSDGHIQQSTSLVETTPTPTPPSCALLQCSDWTRINSLVYLQPYTVLSSTCTLKLNAFGSSFKTPYPKLDFGAMIQTFDVLVDVVVSQLVELPSSPFHHANSTFSGCDNFLEISFAFWFLNLI 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1667519 1672468 + Lag0020727.1 Lac7g0210 613111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0210 602 Gene3D Phosphorylase Kinase; domain 1 140 233 - -
Lac7g0210 602 SMART serkin_6 158 429 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0210 602 Pfam Protein tyrosine and serine/threonine kinase 161 428 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0210 602 MobiDBLite consensus disorder prediction 466 484 - -
Lac7g0210 602 ProSiteProfiles Protein kinase domain profile. 158 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0210 602 FunFam Putative receptor-like serine/threonine-protein kinase 234 444 - -
Lac7g0210 602 FunFam Probable serine/threonine-protein kinase At1g01540 138 233 - -
Lac7g0210 602 MobiDBLite consensus disorder prediction 441 484 - -
Lac7g0210 602 SUPERFAMILY Protein kinase-like (PK-like) 137 430 IPR011009 -
Lac7g0210 602 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524(InterPro)
Lac7g0210 602 CDD STKc_IRAK 164 430 - -
Lac7g0210 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0210 602 MobiDBLite consensus disorder prediction 441 465 - -
Lac7g0210 602 Gene3D Transferase(Phosphotransferase) domain 1 234 445 - -
Lac7g0210 602 PANTHER OS01G0323000 PROTEIN 8 469 IPR052232 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2579 Lac-Chr1:47136939 Lac7g0210 Lac-Chr7:1667519 6.70E-170 dispersed
Lac4g1495 Lac-Chr4:33581982 Lac7g0210 Lac-Chr7:1667519 5.50E-142 dispersed
Lac5g2273 Lac-Chr5:41421748 Lac7g0210 Lac-Chr7:1667519 2.10E-65 dispersed
Lac6g0288 Lac-Chr6:2359709 Lac7g0210 Lac-Chr7:1667519 2.40E-170 dispersed
Lac7g0210 Lac-Chr7:1667519 Lac9g2257 Lac-Chr9:41932067 3.70E-135 dispersed
Lac5g2973 Lac-Chr5:47742212 Lac7g0210 Lac-Chr7:1667519 4.80E-74 wgd
Lac5g2165 Lac-Chr5:40201563 Lac7g0210 Lac-Chr7:1667519 2.50E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86306 PF07714 PK_Tyr_Ser-Thr 2.00E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0210 - - - 0.0