Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0210 | ATGTCTGTTTATGATGCTGCATTTTTCAACACGGAGCTCTCTAAACCGACCTCCATTTTCGGCCTTCGTCTCTGGGTTGTAATCGGAATCTTAGTCGGAGCCTTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTCACTTCTCGCAAGCGGAATCGCCATAAGAACCAAATCCGTTTCCCTAAGTCCACAACCGACCATTCTCCTCCCGCCGTTTCTAAAGAGATCCAGGAAATCGTCCATCACGCGGTGCCGGATCATCACCACCATGTTCAGCCGGAAATTCATGTCGAGATCGGAAAATTGGAGCATCGGGTTGTTTTCTCTGACAGACCTTCTAGTGGTGAGAGCAGAGGCGCTGTGAGTGAAACTGCTTCTTTTGGATCTGGTACTGTTGGGCCTGAGGTTTCGCACTTGGGTTGGGGCAGATGGTATACTCTGAGAGAGCTCGAGGCGGCCACTAATGGCTTGTGTGAAGAGAACGTGATTGGAGAAGGTGGGTATGGGATCGTGTATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAACCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTGGAAGTTGAAGCAATTGGACGAGTAAGACACAAGAATCTTGTCAGATTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACGTTAACAATGGTAATCTAGACCAATGGCTTCACGGCGATGTTGGGGATGTGAGCCCCTTGACCTGGGAGATTCGTGTTAACATCATACTCGGAACAGCAAAGGGATTAGCTTATCTTCATGAGGGTCTTGAGCCAAAGGTTGTCCATCGTGATGTAAAGTCAAGCAACATACTGCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCAGAAAGGAGCTACGTGACAACTCGTGTAATGGGTACATTTGGCTATGTTGCACCCGAGTACGCTTGCACAGGAATGTTAAATGAGAAGAGTGATGTTTATAGTTTTGGAATTCTAATTATGGAGATAATTTCTGGGCGGAGCCCTGTTGATTATAGTAGACCCCAAGGAGAGGTAAATTTGGTGGATTGGTTGAAATCAATGGTTGGAGACAGAAAATCGGAGGAAGTTGTTGACCCCAAGTTGCCTGAGAAGCCTCCATCGAAAGCTCTCAAACGTGTTTTGCTGGTTGCTCTTCGGTGTGTCGATCCTGATGCAACGAAGAGGCCGAAAATGGGACATGTCATCCACATGCTTGAGGCAGATAATTTGCTGTGTAATGATGAGCAGCGAGTTGGTAGGGATTCTTCCCACTCAATTCAAGGCCATCAACATGAGAACCGGGCCGTTCCAAGACGAGTTAACAACCAGAAAGATGAAGGAACATCTTCTAATATAAGTGAAGGTGACAGTGATGGACACATTCAACAATCAACAAGTTTGGTGGAGACAACTCCAACTCCAACTCCTCCTTCATGTGCCCTTTTGCAATGTTCTGACTGGACCAGAATCAATTCTTTGGTTTATCTGCAACCATACACTGTCCTTTCAAGCACTTGCACTCTGAAACTGAATGCTTTTGGGAGCTCCTTCAAAACCCCTTATCCAAAGCTTGATTTTGGAGCAATGATTCAAACCTTTGATGTTTTGGTCGATGTTGTAGTATCTCAACTAGTTGAGCTCCCATCTTCTCCTTTCCACCACGCGAATTCAACGTTTTCTGGCTGCGATAATTTCTTAGAAATTTCCTTTGCTTTCTGGTTTCTGAATCTGATTTAG | 1809 | 45.16 | MSVYDAAFFNTELSKPTSIFGLRLWVVIGILVGALIVLALFLLSLCLTSRKRNRHKNQIRFPKSTTDHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGAVSETASFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLDQWLHGDVGDVSPLTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVDWLKSMVGDRKSEEVVDPKLPEKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLCNDEQRVGRDSSHSIQGHQHENRAVPRRVNNQKDEGTSSNISEGDSDGHIQQSTSLVETTPTPTPPSCALLQCSDWTRINSLVYLQPYTVLSSTCTLKLNAFGSSFKTPYPKLDFGAMIQTFDVLVDVVVSQLVELPSSPFHHANSTFSGCDNFLEISFAFWFLNLI | 602 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1667519 | 1672468 | + | Lag0020727.1 | Lac7g0210 | 613111 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0210 | 602 | Gene3D | Phosphorylase Kinase; domain 1 | 140 | 233 | - | - | |
Lac7g0210 | 602 | SMART | serkin_6 | 158 | 429 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g0210 | 602 | Pfam | Protein tyrosine and serine/threonine kinase | 161 | 428 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac7g0210 | 602 | MobiDBLite | consensus disorder prediction | 466 | 484 | - | - | |
Lac7g0210 | 602 | ProSiteProfiles | Protein kinase domain profile. | 158 | 435 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g0210 | 602 | FunFam | Putative receptor-like serine/threonine-protein kinase | 234 | 444 | - | - | |
Lac7g0210 | 602 | FunFam | Probable serine/threonine-protein kinase At1g01540 | 138 | 233 | - | - | |
Lac7g0210 | 602 | MobiDBLite | consensus disorder prediction | 441 | 484 | - | - | |
Lac7g0210 | 602 | SUPERFAMILY | Protein kinase-like (PK-like) | 137 | 430 | IPR011009 | - | |
Lac7g0210 | 602 | ProSitePatterns | Protein kinases ATP-binding region signature. | 164 | 186 | IPR017441 | GO:0005524(InterPro) | |
Lac7g0210 | 602 | CDD | STKc_IRAK | 164 | 430 | - | - | |
Lac7g0210 | 602 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 280 | 292 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac7g0210 | 602 | MobiDBLite | consensus disorder prediction | 441 | 465 | - | - | |
Lac7g0210 | 602 | Gene3D | Transferase(Phosphotransferase) domain 1 | 234 | 445 | - | - | |
Lac7g0210 | 602 | PANTHER | OS01G0323000 PROTEIN | 8 | 469 | IPR052232 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g2579 | Lac-Chr1:47136939 | Lac7g0210 | Lac-Chr7:1667519 | 6.70E-170 | dispersed | |
Lac4g1495 | Lac-Chr4:33581982 | Lac7g0210 | Lac-Chr7:1667519 | 5.50E-142 | dispersed | |
Lac5g2273 | Lac-Chr5:41421748 | Lac7g0210 | Lac-Chr7:1667519 | 2.10E-65 | dispersed | |
Lac6g0288 | Lac-Chr6:2359709 | Lac7g0210 | Lac-Chr7:1667519 | 2.40E-170 | dispersed | |
Lac7g0210 | Lac-Chr7:1667519 | Lac9g2257 | Lac-Chr9:41932067 | 3.70E-135 | dispersed | |
Lac5g2973 | Lac-Chr5:47742212 | Lac7g0210 | Lac-Chr7:1667519 | 4.80E-74 | wgd | |
Lac5g2165 | Lac-Chr5:40201563 | Lac7g0210 | Lac-Chr7:1667519 | 2.50E-28 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
86306 | PF07714 | PK_Tyr_Ser-Thr | 2.00E-45 | CL0016 | Lac | PK |
Pathway information
