Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac7g0224 | ATGGCATCAAATTTGGGAGGGACATCGATGTCGCAAACAGATGATTTCGAGACGTTGCCTCAAACGACTGATATCGAGCCTCTAAAGAGGGCCTGGCGTAATGAAAAGGCTGCTCCTGAGATTCTACCCTTTGAGGCATCTCTAGTTGAGAGAATCAAAGGGCAGATTCAATTAATGGAAGATGCTATAGAGGAAGATTCAAGAAGTGGTATCGATCCGCTAATCGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTATTGAGATCCTATATTAGGATTCGCTTGCAGAAGATCGAGAAGTACATGTTCTATATCTTGAAGTCAGATGAACTTTCCAGGCGTCTTTCTGAAGAAGAGAGAAGATTTACCGATAGGTGTTGTCATGATATGAAAAAACATTTTGATGAGAGCGTTCTATCAAAATTTCCAATTAATTATCAGGACTTTTTGAGGCAATCTGTAATAAGTGAAGAGGATGACATGGTTCCAGAACCCCCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTGGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCTAGTAGAATCTATCGACACAACGACATTGGTACCTCTCACCATCTTTATTATTTTGCATCTTGTCTTGGTCAATCTGTACGTGATAAAAGGCATTGCTCAAAGGTAATGGAGACTATTCCATTGGTTACTTGGATGTCAATTTCAACATTGGCTGAGCTCATAAATGAAAGGCATGGTAGAGCATTGAAGGCATTAGCAAAAGCTGGTAAGCCATTTCAATCTGATATCTCATGA | 819 | 40.05 | MASNLGGTSMSQTDDFETLPQTTDIEPLKRAWRNEKAAPEILPFEASLVERIKGQIQLMEDAIEEDSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMFYILKSDELSRRLSEEERRFTDRCCHDMKKHFDESVLSKFPINYQDFLRQSVISEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIYRHNDIGTSHHLYYFASCLGQSVRDKRHCSKVMETIPLVTWMSISTLAELINERHGRALKALAKAGKPFQSDIS | 272 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1762442 | 1765613 | - | Lag0020741.1 | Lac7g0224 | 613125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac7g0224 | 272 | Gene3D | - | 11 | 212 | - | - | |
| Lac7g0224 | 272 | Pfam | GINS complex protein helical bundle domain | 61 | 138 | IPR021151 | - | |
| Lac7g0224 | 272 | SUPERFAMILY | GINS helical bundle-like | 21 | 154 | IPR036224 | - | |
| Lac7g0224 | 272 | CDD | GINS_A_Sld5 | 24 | 142 | IPR038749 | - | |
| Lac7g0224 | 272 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Lac7g0224 | 272 | PANTHER | SLD5 PROTEIN | 11 | 193 | IPR008591 | GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro) | |
| Lac7g0224 | 272 | FunFam | DNA replication complex GINS protein SLD5 | 9 | 203 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac4g0784 | Lac-Chr4:19290509 | Lac7g0224 | Lac-Chr7:1762442 | 1.20E-59 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac7g0224 | K10735 | - | csv:101210888 | 323.553 |