Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0226 ATGGGAGGCTGCTGCTGTTCGACCCGAAAATCTCACGTGAATGGAACTCCAGCATATTACTATTGCCCGCTGGCTATGGAGGAGCGTGAATCATCCGAAATTCATAGTGGCTCGGCCTCCATGCTCCTCAATGCAGGACATGATTTGGGCCTGGATTCGTCGATACCGAACACATACCGAGCCCCTCCCACACCTCTCCCATATGATGTGGTTTTGAGATGTCCACAACCGAAAGATCTTAACTCTATTAAAGAAACAATTTGTGGATGTAGTTTCAGAACTTCCTCAGCAGTGAAAAATGTTGGGGAACTAGATAGTAAGTTCCAAGACAGCCCTTTGCTTGGAGGCCCTCCACGAAAATTGGAACATTCAAAGTCGAAAGGCAATAATACTCCAATTCCGATCGCCGAAGAAGAGGATGTCTGTCCCATTTGTCTTGAAGAGTATGATTCAACACATCCAGAAATTATCACAAAATGCAAGCACCACTTTCACCTCGCTTGCCTTCTCGAGTGGACCGAAAGAAGCGATGCCTGTCCTATCTGCGACAAGCTTGAGCTCAGTTCACCACTGGTGGATGGTGCTTTTCCTCGTTCAGTTACAGTCAGTCGTTTCGATACGTCGGGGAAGAACAAAGCTCTGATACAACAGATGCTTCCTCATGTTGTTGGATCTTCATGA 681 46.7 MGGCCCSTRKSHVNGTPAYYYCPLAMEERESSEIHSGSASMLLNAGHDLGLDSSIPNTYRAPPTPLPYDVVLRCPQPKDLNSIKETICGCSFRTSSAVKNVGELDSKFQDSPLLGGPPRKLEHSKSKGNNTPIPIAEEEDVCPICLEEYDSTHPEIITKCKHHFHLACLLEWTERSDACPICDKLELSSPLVDGAFPRSVTVSRFDTSGKNKALIQQMLPHVVGSS 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 1783529 1784824 + Lag0020743.1 Lac7g0226 613127
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0226 226 ProSiteProfiles Zinc finger RING-type profile. 142 183 IPR001841 -
Lac7g0226 226 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 187 - GO:0004842(PANTHER)|GO:0005829(PANTHER)
Lac7g0226 226 SMART ring_2 142 182 IPR001841 -
Lac7g0226 226 Pfam Ring finger domain 141 182 IPR001841 -
Lac7g0226 226 SUPERFAMILY RING/U-box 136 185 - -
Lac7g0226 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 188 IPR013083 -
Lac7g0226 226 MobiDBLite consensus disorder prediction 108 132 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g2317 Lac-Chr12:40294311 Lac7g0226 Lac-Chr7:1783529 3.10E-10 dispersed
Lac11g2071 Lac-Chr11:36575171 Lac7g0226 Lac-Chr7:1783529 2.60E-25 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0226 - - - 0.0