Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0255 ATGTTAAGTCGTGCTATCAAAGTGAACATAATTCAGGTAATTGATATATTCCCTCGACCACGAGGAGCAGACAAGGACAACACAGACCCGAAATCAGACCCCGAAGAGGAAATGGGCAATAGGGTTGGGCCAAGGCCAATGCCGACCCTCGACCTGCACCTCCCCTCCACTTGGTCCCTGAAATCTTTTGGCTGTCATGATTCAACCTGGTTCAATCCAAATCGTCTTCCAATGCCTAGAAACCCTAAAAGGAAAATATACTTAACAAATAGGAGGATGAAGAATAAAAACAAGATTCCAGATGTAAAACCTTCAAAAAATAACCATCACCCGCATAAAATCACGAGAGGAGAGTTAACGAAAAGGTTACCAAGACGAACAGTGCCGACCCGAGGACGAGGTCGAGGCCGAGGTCAGGACGAAACCACACGAGAGATCAGGACCATCTTTGGAGGGCAAATCAGCGAAGTCACGTCTTCCCCCGTCTTCAACAAATTTATCGTTGATGGCACGTGGGTCAGCTGCATCGGGACTGTGATTGCCGGAGCTTCGTTTTTTCCCACAAATTTCTCTGCCGCAGACGTCTCACCATTGTTTTCTCAGCCTTCAGCATCGTCTTGTGCTCCGTGTGAACAGTTATATGTGTTGTTGATTGATTCGTTTGAATTGAATGCACGAGTGACTGATCGGATGGATGGAACGATGTGTTTGATTGAGTGTCAACAGTGGCTGAATGATTGGCAATCTTGTATTTGGAAGCAAAATGTGTTATGTGGTAGCGACAGAACATATTGCAAGACGTTGGACCAGTTTGGTCCCGGCAATGTGCTTAGAAATAGAATTATTGATGCCAAGTTGACTGGTGGTTCAAGAGTGTTTTATAAAGTGCCCAAGAAGAGAAACAGAATTGTAGCTTCTATCAATTCCAATCATTTGAGTCTGGTTTGTGCTAGCAAGTTTGACGGTGCTTTGCAAATTTTTAATCACAAGAGATTCTTGAACTTCAACAATAAGATAATTGGAAGAAGGACGAGGATGGTTAATTCAGAGTGTCAAAGCAATGATTCTTTAGCATTTATTGATGGAAATGGAAGAAATGTGGAATATGTAGATACCAGTGACGAAGGATCCAGTTCCGAGCCTACCGATGGTGTAGGGTCAGCTGGTTCTAAAGAAGCTGGTGGAGAAGCAGAAGCGGTAGAAACAGATGCACCGACTGTGGATGAGCTTAGAGAATTGCTGCAAAAGGCCATGACAGAATTGGAAGTTGCGAGACTTAACAGTACCATGTTCGAGGAGAAGGCCCAAAAAATATCAGAAACAGCGATAGCTTTGCAAGATGAAGCAGCCCATGCTTGGAATGATGTGAACTCTACTCTCGATTCTGTACAACAGATAGTGAATGAAGAATATGCTGCCAAAGAAGCTGTTCAAAAAGCAACCATGGCTCTTTCATTAGCAGAAGCAAGGCTTCAGGTGGCAACAGAGTCATTGGATCTGGCAAAAGGAGGAAATGATTCTCCAGAAACATCAATAGATAGTGAGGGAGAGATTGATGGCAAGGAAGAGCAAGAAGTGTTGTTAGTTGCTCAGGAGGACATCAAAGAATGCCGGGCAAATTTGGAAATTTGTGATGCGGAATTGAAGCGTGTGCAGAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACAGGTTGAACGAGTTAGCTGAAAAAGCACAATTGAATGCGTTGAAAGCTGAAGAAGATGTGGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTCAGTGATGCTGAAATAGTTTTACAGAAAGTAGAGAAATCTTTATCAAATTCTTTTGTTGACACTTCGGAAACCACACAGGGGTCAAATGTTATTGAAGAAGTTGTTAATGAGGATAATAAGGCAGTTCTAGAAATTTCTGGTGATATCGCTGTTGAAATGGATAGAGATTTGCCACTTAGTGGCGATTCCTTAGCTGTCAAATCTCTACCAGGTAGCTTTTCAGATTCTGAAGACTCCGATCAAGCATATGACTTAAGTGATAACGATAATGGAAAATTGAGTTCAGACTCCTTTAAGGAGGTAGAAGCTGGAGCAGAGAAGTCTGTTTTGAGTCAAGCAAAAAAGCAGGAAACACAGAAGGATTTGACCAGAGAAGGCTCGCCTTTAAATTCCCCCAAGGCTCTATTGAAAAAATCTTCTCGTTTTTTTTCAGCATCATTCTTTTCCTTTACAGTTGATGGGACAGAGTTCACTCCAGCATTAGTCTTGGATTTCACGAAAAAGCAATTGCCAAAGCTAGTTGTTGGAGTAGTACTGTTAGGAGCAGGGATCACTATCTTTTCAAATCGAGCAGAAAGGAGTTCTCAGATGTTTCAGCAGCCTGATGCTGTCTCCATTAGCACTGATGAAGTTTCCTTGAATACAAAGCCTTTATTTCAACAATTAAGGAAACTTCCTAAAAGAGTGAAAAAGTTAATTGCAAAGATTCCCCATCAAGAGGTGAATGAAGAGGAGGCTTCACTGTTAGACATGTTATGGCTGTTGCTTGCTAGTGTTATATTTGTGCCAACATTTCAGAAACTTCCTGGAGGAAGTCCTGTCCTTGGGTACTTGGCTGCTGGCATTTTAATTGGGCCATATGGTCTCTCCATAATCCGTCACGTGCATGGAACTAAAGCAATTGCTGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGCCTGGAGTTATCTGTCGAGAGGCTAAGTTCCATGAAGAAATATGTTTTTGGGTTAGGGTCTGCACAGGTCCTGGTTACAGCTGTGGTGGTCGGCTTGGTTGCTCATATTGTCTGTGGGCAGCCTGGCCCAGCTGCAATTGTCATTGGAAATGGTTTGGCTTTGTCATCCACTGCTGTTGTCCTTCAGGTGTTGCAAGAGCGAGGTGAGAGCACTTCACGTCATGGGCGTGCCACATTTTCTGTCTTACTATTCCAGGATTTGGCTGTTGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCCAACTCATCCAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTTGGCGTAGCTGCTGTTAAGGCAATAGTTGCCATTTCTGCCATAATAGCTGGTGGACGCCTGCTACTACGACCAATTTATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCTGCCAACACACTACTTGTCATTCTGGGAACAAGTCTACTTACTGCCAGGGCTGGACTATCAATGGCGCTGGGTGCATTTCTAGCAGGTTTACTACTAGCAGAAACGGAATTCTCCTTGCAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTATTAGGTCTCTTCTTCATGACGGTTGGGATGTCCATCGATCCAAAACTTCTTCTTTCTAACTTTCCAGTTATCACGGGGTCTTTGGGACTTCTTATTGGTGGCAAGACTATATTAGTTGCCTTGGTTGGTAGACTTTTTGGCATCTCAATTATATCTGCATTGAGAGTTGGGTTGCTTCTTGCTCCTGGTGGAGAATTTGCTTTTGTGGCGTTTGGTGAAGCTGTCAATCAGGGTATAATGTCTTCGCAACTATCCTCTTTGTTGTTTCTTGTTGTGGGAATTTCAATGGCGCTTACACCGTGGCTAGCTGCTGGTGGTCAGTTAATTGCTTCTCGTTTTGAGCAGCATGATGTTCGGAGTTTATTACCTGTTGAAAGTGAGACTGACGATTTACAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGTCAGATAATAGCCCAGCTTCTGTCAGAGCGACTGATTCCTTTTGTTGCCCTTGATGTGAGAAGTGATAGAGTGGCTGTTGGACGTGCCCTAGACCTTCCTGTGTATTTTGGAGATGCAGGAAGTCGAGAGGTTCTTCATAAAGTTGGTGCTGAAAGGGCATGTGCCGCTGCAATAACATTGGATACACCGGGTGCAAATTACAGAACTGTTTGGGCTCTGAGCAAGTATTTCCCTAATGTTAAGACTTTTGTTCGAGCTCATGATGTTGATCACGGCCTTAATTTGGAGAAAGCTGGGGCTACTGCGGTGGTTCCCGAGACGTTGGAACCAAGCTTACAGTTAGCTGCTGCCGTTCTTGCTCAGGCTAAACTGCCCATGTCAGAGATTGCTGCAACAATCAACGAATTTAGGTCCCGACATTTATCCGAGCTTACCGAGCTATGTGAAGCTAGCGGAAGCTCACTCGGATACGGGTTTTCTCGGATCATGAGCAAACCGAAAATTCAAACCTCTGATTCTTCAGATGAGAACCAAATCACAGAAGGAACACTGGCTATATGA 4371 43.49 MLSRAIKVNIIQVIDIFPRPRGADKDNTDPKSDPEEEMGNRVGPRPMPTLDLHLPSTWSLKSFGCHDSTWFNPNRLPMPRNPKRKIYLTNRRMKNKNKIPDVKPSKNNHHPHKITRGELTKRLPRRTVPTRGRGRGRGQDETTREIRTIFGGQISEVTSSPVFNKFIVDGTWVSCIGTVIAGASFFPTNFSAADVSPLFSQPSASSCAPCEQLYVLLIDSFELNARVTDRMDGTMCLIECQQWLNDWQSCIWKQNVLCGSDRTYCKTLDQFGPGNVLRNRIIDAKLTGGSRVFYKVPKKRNRIVASINSNHLSLVCASKFDGALQIFNHKRFLNFNNKIIGRRTRMVNSECQSNDSLAFIDGNGRNVEYVDTSDEGSSSEPTDGVGSAGSKEAGGEAEAVETDAPTVDELRELLQKAMTELEVARLNSTMFEEKAQKISETAIALQDEAAHAWNDVNSTLDSVQQIVNEEYAAKEAVQKATMALSLAEARLQVATESLDLAKGGNDSPETSIDSEGEIDGKEEQEVLLVAQEDIKECRANLEICDAELKRVQSKKEELQKEVDRLNELAEKAQLNALKAEEDVANIMLLAEQAVAFELEAAQRVSDAEIVLQKVEKSLSNSFVDTSETTQGSNVIEEVVNEDNKAVLEISGDIAVEMDRDLPLSGDSLAVKSLPGSFSDSEDSDQAYDLSDNDNGKLSSDSFKEVEAGAEKSVLSQAKKQETQKDLTREGSPLNSPKALLKKSSRFFSASFFSFTVDGTEFTPALVLDFTKKQLPKLVVGVVLLGAGITIFSNRAERSSQMFQQPDAVSISTDEVSLNTKPLFQQLRKLPKRVKKLIAKIPHQEVNEEEASLLDMLWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHIVCGQPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGVAAVKAIVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVITGSLGLLIGGKTILVALVGRLFGISIISALRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPMSEIAATINEFRSRHLSELTELCEASGSSLGYGFSRIMSKPKIQTSDSSDENQITEGTLAI 1456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1996328 2012129 + Lag0020772.1 Lac7g0255 613156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0255 1456 Coils Coil 534 582 - -
Lac7g0255 1456 Gene3D - 1256 1420 - -
Lac7g0255 1456 ProSiteProfiles RCK N-terminal domain profile. 1260 1382 IPR003148 GO:0006813(InterPro)
Lac7g0255 1456 MobiDBLite consensus disorder prediction 19 40 - -
Lac7g0255 1456 MobiDBLite consensus disorder prediction 371 406 - -
Lac7g0255 1456 Pfam Sodium/hydrogen exchanger family 862 1229 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Lac7g0255 1456 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 571 1454 - GO:0009507(PANTHER)|GO:0015386(PANTHER)|GO:0016020(PANTHER)
Lac7g0255 1456 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 859 1139 IPR004771 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)
Lac7g0255 1456 FunFam K(+) efflux antiporter 2 chloroplastic 1256 1420 - -
Lac7g0255 1456 MobiDBLite consensus disorder prediction 371 385 - -
Lac7g0255 1456 Gene3D - 848 1235 IPR038770 -
Lac7g0255 1456 Coils Coil 407 427 - -
Lac7g0255 1456 MobiDBLite consensus disorder prediction 713 735 - -
Lac7g0255 1456 MobiDBLite consensus disorder prediction 674 694 - -
Lac7g0255 1456 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1257 1399 IPR036291 -
Lac7g0255 1456 MobiDBLite consensus disorder prediction 97 119 - -
Lac7g0255 1456 FunFam K(+) efflux antiporter 2 chloroplastic 848 1234 - -
Lac7g0255 1456 MobiDBLite consensus disorder prediction 19 47 - -
Lac7g0255 1456 Pfam TrkA-N domain 1261 1374 IPR003148 GO:0006813(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0113 Lac-Chr12:1274695 Lac7g0255 Lac-Chr7:1996328 1.50E-91 dispersed
Lac5g2858 Lac-Chr5:46860039 Lac7g0255 Lac-Chr7:1996328 2.50E-35 dispersed
Lac7g0255 Lac-Chr7:1996328 Lac8g1939 Lac-Chr8:37747345 3.20E-07 dispersed
Lac7g0255 Lac-Chr7:1996328 Lac6g0195 Lac-Chr6:1516352 3.60E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0255 K03455 - csv:101213081 1964.12