Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0255 | ATGTTAAGTCGTGCTATCAAAGTGAACATAATTCAGGTAATTGATATATTCCCTCGACCACGAGGAGCAGACAAGGACAACACAGACCCGAAATCAGACCCCGAAGAGGAAATGGGCAATAGGGTTGGGCCAAGGCCAATGCCGACCCTCGACCTGCACCTCCCCTCCACTTGGTCCCTGAAATCTTTTGGCTGTCATGATTCAACCTGGTTCAATCCAAATCGTCTTCCAATGCCTAGAAACCCTAAAAGGAAAATATACTTAACAAATAGGAGGATGAAGAATAAAAACAAGATTCCAGATGTAAAACCTTCAAAAAATAACCATCACCCGCATAAAATCACGAGAGGAGAGTTAACGAAAAGGTTACCAAGACGAACAGTGCCGACCCGAGGACGAGGTCGAGGCCGAGGTCAGGACGAAACCACACGAGAGATCAGGACCATCTTTGGAGGGCAAATCAGCGAAGTCACGTCTTCCCCCGTCTTCAACAAATTTATCGTTGATGGCACGTGGGTCAGCTGCATCGGGACTGTGATTGCCGGAGCTTCGTTTTTTCCCACAAATTTCTCTGCCGCAGACGTCTCACCATTGTTTTCTCAGCCTTCAGCATCGTCTTGTGCTCCGTGTGAACAGTTATATGTGTTGTTGATTGATTCGTTTGAATTGAATGCACGAGTGACTGATCGGATGGATGGAACGATGTGTTTGATTGAGTGTCAACAGTGGCTGAATGATTGGCAATCTTGTATTTGGAAGCAAAATGTGTTATGTGGTAGCGACAGAACATATTGCAAGACGTTGGACCAGTTTGGTCCCGGCAATGTGCTTAGAAATAGAATTATTGATGCCAAGTTGACTGGTGGTTCAAGAGTGTTTTATAAAGTGCCCAAGAAGAGAAACAGAATTGTAGCTTCTATCAATTCCAATCATTTGAGTCTGGTTTGTGCTAGCAAGTTTGACGGTGCTTTGCAAATTTTTAATCACAAGAGATTCTTGAACTTCAACAATAAGATAATTGGAAGAAGGACGAGGATGGTTAATTCAGAGTGTCAAAGCAATGATTCTTTAGCATTTATTGATGGAAATGGAAGAAATGTGGAATATGTAGATACCAGTGACGAAGGATCCAGTTCCGAGCCTACCGATGGTGTAGGGTCAGCTGGTTCTAAAGAAGCTGGTGGAGAAGCAGAAGCGGTAGAAACAGATGCACCGACTGTGGATGAGCTTAGAGAATTGCTGCAAAAGGCCATGACAGAATTGGAAGTTGCGAGACTTAACAGTACCATGTTCGAGGAGAAGGCCCAAAAAATATCAGAAACAGCGATAGCTTTGCAAGATGAAGCAGCCCATGCTTGGAATGATGTGAACTCTACTCTCGATTCTGTACAACAGATAGTGAATGAAGAATATGCTGCCAAAGAAGCTGTTCAAAAAGCAACCATGGCTCTTTCATTAGCAGAAGCAAGGCTTCAGGTGGCAACAGAGTCATTGGATCTGGCAAAAGGAGGAAATGATTCTCCAGAAACATCAATAGATAGTGAGGGAGAGATTGATGGCAAGGAAGAGCAAGAAGTGTTGTTAGTTGCTCAGGAGGACATCAAAGAATGCCGGGCAAATTTGGAAATTTGTGATGCGGAATTGAAGCGTGTGCAGAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACAGGTTGAACGAGTTAGCTGAAAAAGCACAATTGAATGCGTTGAAAGCTGAAGAAGATGTGGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTCAGTGATGCTGAAATAGTTTTACAGAAAGTAGAGAAATCTTTATCAAATTCTTTTGTTGACACTTCGGAAACCACACAGGGGTCAAATGTTATTGAAGAAGTTGTTAATGAGGATAATAAGGCAGTTCTAGAAATTTCTGGTGATATCGCTGTTGAAATGGATAGAGATTTGCCACTTAGTGGCGATTCCTTAGCTGTCAAATCTCTACCAGGTAGCTTTTCAGATTCTGAAGACTCCGATCAAGCATATGACTTAAGTGATAACGATAATGGAAAATTGAGTTCAGACTCCTTTAAGGAGGTAGAAGCTGGAGCAGAGAAGTCTGTTTTGAGTCAAGCAAAAAAGCAGGAAACACAGAAGGATTTGACCAGAGAAGGCTCGCCTTTAAATTCCCCCAAGGCTCTATTGAAAAAATCTTCTCGTTTTTTTTCAGCATCATTCTTTTCCTTTACAGTTGATGGGACAGAGTTCACTCCAGCATTAGTCTTGGATTTCACGAAAAAGCAATTGCCAAAGCTAGTTGTTGGAGTAGTACTGTTAGGAGCAGGGATCACTATCTTTTCAAATCGAGCAGAAAGGAGTTCTCAGATGTTTCAGCAGCCTGATGCTGTCTCCATTAGCACTGATGAAGTTTCCTTGAATACAAAGCCTTTATTTCAACAATTAAGGAAACTTCCTAAAAGAGTGAAAAAGTTAATTGCAAAGATTCCCCATCAAGAGGTGAATGAAGAGGAGGCTTCACTGTTAGACATGTTATGGCTGTTGCTTGCTAGTGTTATATTTGTGCCAACATTTCAGAAACTTCCTGGAGGAAGTCCTGTCCTTGGGTACTTGGCTGCTGGCATTTTAATTGGGCCATATGGTCTCTCCATAATCCGTCACGTGCATGGAACTAAAGCAATTGCTGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGCCTGGAGTTATCTGTCGAGAGGCTAAGTTCCATGAAGAAATATGTTTTTGGGTTAGGGTCTGCACAGGTCCTGGTTACAGCTGTGGTGGTCGGCTTGGTTGCTCATATTGTCTGTGGGCAGCCTGGCCCAGCTGCAATTGTCATTGGAAATGGTTTGGCTTTGTCATCCACTGCTGTTGTCCTTCAGGTGTTGCAAGAGCGAGGTGAGAGCACTTCACGTCATGGGCGTGCCACATTTTCTGTCTTACTATTCCAGGATTTGGCTGTTGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCCAACTCATCCAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTTGGCGTAGCTGCTGTTAAGGCAATAGTTGCCATTTCTGCCATAATAGCTGGTGGACGCCTGCTACTACGACCAATTTATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCTGCCAACACACTACTTGTCATTCTGGGAACAAGTCTACTTACTGCCAGGGCTGGACTATCAATGGCGCTGGGTGCATTTCTAGCAGGTTTACTACTAGCAGAAACGGAATTCTCCTTGCAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTATTAGGTCTCTTCTTCATGACGGTTGGGATGTCCATCGATCCAAAACTTCTTCTTTCTAACTTTCCAGTTATCACGGGGTCTTTGGGACTTCTTATTGGTGGCAAGACTATATTAGTTGCCTTGGTTGGTAGACTTTTTGGCATCTCAATTATATCTGCATTGAGAGTTGGGTTGCTTCTTGCTCCTGGTGGAGAATTTGCTTTTGTGGCGTTTGGTGAAGCTGTCAATCAGGGTATAATGTCTTCGCAACTATCCTCTTTGTTGTTTCTTGTTGTGGGAATTTCAATGGCGCTTACACCGTGGCTAGCTGCTGGTGGTCAGTTAATTGCTTCTCGTTTTGAGCAGCATGATGTTCGGAGTTTATTACCTGTTGAAAGTGAGACTGACGATTTACAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGTCAGATAATAGCCCAGCTTCTGTCAGAGCGACTGATTCCTTTTGTTGCCCTTGATGTGAGAAGTGATAGAGTGGCTGTTGGACGTGCCCTAGACCTTCCTGTGTATTTTGGAGATGCAGGAAGTCGAGAGGTTCTTCATAAAGTTGGTGCTGAAAGGGCATGTGCCGCTGCAATAACATTGGATACACCGGGTGCAAATTACAGAACTGTTTGGGCTCTGAGCAAGTATTTCCCTAATGTTAAGACTTTTGTTCGAGCTCATGATGTTGATCACGGCCTTAATTTGGAGAAAGCTGGGGCTACTGCGGTGGTTCCCGAGACGTTGGAACCAAGCTTACAGTTAGCTGCTGCCGTTCTTGCTCAGGCTAAACTGCCCATGTCAGAGATTGCTGCAACAATCAACGAATTTAGGTCCCGACATTTATCCGAGCTTACCGAGCTATGTGAAGCTAGCGGAAGCTCACTCGGATACGGGTTTTCTCGGATCATGAGCAAACCGAAAATTCAAACCTCTGATTCTTCAGATGAGAACCAAATCACAGAAGGAACACTGGCTATATGA | 4371 | 43.49 | MLSRAIKVNIIQVIDIFPRPRGADKDNTDPKSDPEEEMGNRVGPRPMPTLDLHLPSTWSLKSFGCHDSTWFNPNRLPMPRNPKRKIYLTNRRMKNKNKIPDVKPSKNNHHPHKITRGELTKRLPRRTVPTRGRGRGRGQDETTREIRTIFGGQISEVTSSPVFNKFIVDGTWVSCIGTVIAGASFFPTNFSAADVSPLFSQPSASSCAPCEQLYVLLIDSFELNARVTDRMDGTMCLIECQQWLNDWQSCIWKQNVLCGSDRTYCKTLDQFGPGNVLRNRIIDAKLTGGSRVFYKVPKKRNRIVASINSNHLSLVCASKFDGALQIFNHKRFLNFNNKIIGRRTRMVNSECQSNDSLAFIDGNGRNVEYVDTSDEGSSSEPTDGVGSAGSKEAGGEAEAVETDAPTVDELRELLQKAMTELEVARLNSTMFEEKAQKISETAIALQDEAAHAWNDVNSTLDSVQQIVNEEYAAKEAVQKATMALSLAEARLQVATESLDLAKGGNDSPETSIDSEGEIDGKEEQEVLLVAQEDIKECRANLEICDAELKRVQSKKEELQKEVDRLNELAEKAQLNALKAEEDVANIMLLAEQAVAFELEAAQRVSDAEIVLQKVEKSLSNSFVDTSETTQGSNVIEEVVNEDNKAVLEISGDIAVEMDRDLPLSGDSLAVKSLPGSFSDSEDSDQAYDLSDNDNGKLSSDSFKEVEAGAEKSVLSQAKKQETQKDLTREGSPLNSPKALLKKSSRFFSASFFSFTVDGTEFTPALVLDFTKKQLPKLVVGVVLLGAGITIFSNRAERSSQMFQQPDAVSISTDEVSLNTKPLFQQLRKLPKRVKKLIAKIPHQEVNEEEASLLDMLWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHIVCGQPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGVAAVKAIVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVITGSLGLLIGGKTILVALVGRLFGISIISALRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPMSEIAATINEFRSRHLSELTELCEASGSSLGYGFSRIMSKPKIQTSDSSDENQITEGTLAI | 1456 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1996328 | 2012129 | + | Lag0020772.1 | Lac7g0255 | 613156 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0255 | 1456 | Coils | Coil | 534 | 582 | - | - | |
Lac7g0255 | 1456 | Gene3D | - | 1256 | 1420 | - | - | |
Lac7g0255 | 1456 | ProSiteProfiles | RCK N-terminal domain profile. | 1260 | 1382 | IPR003148 | GO:0006813(InterPro) | |
Lac7g0255 | 1456 | MobiDBLite | consensus disorder prediction | 19 | 40 | - | - | |
Lac7g0255 | 1456 | MobiDBLite | consensus disorder prediction | 371 | 406 | - | - | |
Lac7g0255 | 1456 | Pfam | Sodium/hydrogen exchanger family | 862 | 1229 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
Lac7g0255 | 1456 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 571 | 1454 | - | GO:0009507(PANTHER)|GO:0015386(PANTHER)|GO:0016020(PANTHER) | |
Lac7g0255 | 1456 | NCBIfam | monovalent cation:proton antiporter-2 (CPA2) family protein | 859 | 1139 | IPR004771 | GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro) | |
Lac7g0255 | 1456 | FunFam | K(+) efflux antiporter 2 chloroplastic | 1256 | 1420 | - | - | |
Lac7g0255 | 1456 | MobiDBLite | consensus disorder prediction | 371 | 385 | - | - | |
Lac7g0255 | 1456 | Gene3D | - | 848 | 1235 | IPR038770 | - | |
Lac7g0255 | 1456 | Coils | Coil | 407 | 427 | - | - | |
Lac7g0255 | 1456 | MobiDBLite | consensus disorder prediction | 713 | 735 | - | - | |
Lac7g0255 | 1456 | MobiDBLite | consensus disorder prediction | 674 | 694 | - | - | |
Lac7g0255 | 1456 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 1257 | 1399 | IPR036291 | - | |
Lac7g0255 | 1456 | MobiDBLite | consensus disorder prediction | 97 | 119 | - | - | |
Lac7g0255 | 1456 | FunFam | K(+) efflux antiporter 2 chloroplastic | 848 | 1234 | - | - | |
Lac7g0255 | 1456 | MobiDBLite | consensus disorder prediction | 19 | 47 | - | - | |
Lac7g0255 | 1456 | Pfam | TrkA-N domain | 1261 | 1374 | IPR003148 | GO:0006813(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0113 | Lac-Chr12:1274695 | Lac7g0255 | Lac-Chr7:1996328 | 1.50E-91 | dispersed | |
Lac5g2858 | Lac-Chr5:46860039 | Lac7g0255 | Lac-Chr7:1996328 | 2.50E-35 | dispersed | |
Lac7g0255 | Lac-Chr7:1996328 | Lac8g1939 | Lac-Chr8:37747345 | 3.20E-07 | dispersed | |
Lac7g0255 | Lac-Chr7:1996328 | Lac6g0195 | Lac-Chr6:1516352 | 3.60E-35 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g0255 | K03455 | - | csv:101213081 | 1964.12 |