Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0267 ATGAGTTTTGCGGTAAGATTCGACTGTAGTGGTGGTGGTGGTTACGGCGGAGACGACGGTGGAGACGGCAGTCTTATGGCCTCCGGTGCTATTGCTCAACCACGCCTTGTTACTCACTCTTCTTTCCACAAATCCATGTTCTCTTCCCCTAGACTCTCTCTCGCGCTCACGAATCTCGATGGGCTCGGCTCCGGCGAGATGATTCCGGCGGACGGTGGTTTTGAGGTCAATGTTCGGCGGAGGAGTAGAGAGGAAGAGCCGGCGGAGAGTAGATCCGGCAGCGACAATATGGACGGCGGCGGCGGTTGCGGCTCCGGCGACGATCTCGACGCTGCCGCTGCCGTCGGCGATAATCCTAGGAAGAAGAAGCGGTACCACCGGCACACTCCTCAGCAAATCCAAGAACTCGAAGCTATGTTCAAGGAATGTCCTCATCCCGACGAGAAACAGCGATTGGAGCTCAGTAGACGACTCTCTTTAGAAACAAAACAAGTTAAATTCTGGTTTCAAAATCGTCGAACTCAAATGAAGACTCAATTGGAACGCCACGAGAACACATTACTCCGGCAAGAGAACGACAAGCTCCGAGCAGAGAACATGGCGATTCGCGAGGCCATAAGAAACCCAATCTGCTCGACCTGCGGCGGGCCGGCCATGATCGGAGAAATCTCTCTGGAAGAGCAGCAGCTCCGAATCGAAAACGCCAGACTGAAGGAGGAACTGGAGCGGGTGTGCGGCCTGGCCGGGAAGTTCCTGGGGCGGCCGATTCCGGTGGCGTCGTCGCCGCCGTTGGAGCTGGGAGTGGGGAGCAATCTGGAGGAATTTGGAGGGGGAATGATGGAGAGATCTGTGTATCTGGAAATGGCGCTGGCGGCCATGGATGAGCTTGTGAAAATGGCGGATGGAGAGGAACCGTTGTGGATTGGAGAGAAGGTGAATGAAGAAGAATATGTGAGAATGTTCAGTGGTGGGTGCGTCGGGATTAAGCCGAATGGGTTCGTTTCTGAAGGTTCGAGAGAGAGTGGAATCGTCATCATCAACAGTTCTGCTCTGGTTGAAACTTTAATGGACTCTAACCGGTGGGTGGAGATGTTTCCGAACTTGGTCGCGACGGCCGCCACCACCGACGTCATCTCCGGCGGCATGGGAGGAACCAGAAACGGCGCTCTTCAACTGATGCATGCAGAGCTCCAAATTCTATCTCCCATGGTTCCGGTGAGGCAATTAAGCTTCCTCCGCTTCTGCAAGCAGCACGCCGAAGGCGTTTGGGCCGTCGTTGACGTCTCGATCAATGCCGTAACCGAAACCTCCTCTCCGCCGTGCCGGAGACTCCCCTCCGGCTGCCTAATCCACGACATGCCCAATGGCTACTCCAAGGTCACTTGGGTTGAACATTCACAATACGATGAAAGCCATATTCATGAAATGTACCGGCCCCTCGTCGGCTCCGGTCTCGGCTTCGGAGCCCGACGGTGGATCACCACCCTCCAACGCCAATGCGAGTGCCTTGCCATCCTCATCTCCGCTCCATCAGACCATTCTGGGATTTCAGCGAGTGGGCGGCGGAGCATGGTGAAGCTAGCGCAGCGGATGACGGCGAATTTCTGCGCCGGAGTTTGCGCGTCGACGGTGTACAAATGGAACAAGCTAAACACCGGCAATAATGTGGGGGAGGATGTGAGAGTGATGACGAGGAAGAGTGTCGACGATCCCGGGGAGCCGCCGGGGACGGTGCTGAGCGCAGCGACGTCGGTATGGGTGGCGATGGCGGCGGAGAGAGTGTTTGAGTTTCTACGTGATGAGAGGCTGAGGAGCGAATGGGACATTCTGTCCAACGGCGGACCCATGCAGGAGATGCTCCATATCCCCAAAGCACAACACCATGCCAATGCTGTCTCTCTCCTCCGCGCCTCCTCTCTAAATCCAAGCCAGAATAGCATGTTAATTCTGCAAGAGACTTGCACCGATCCATCGGGGTCGCTTGTGGTGTACGCGCCGGTGGACATTCCGGCGATGCAGGTGGTGATGAACGGCGGCGACTCGGCCTACGTGGCGCTGCTGCCGTCGGGGTTCGCGGTGGTGCCGGCGGGGGATGGCGGCGGCGGTGGAGGGAGTCTGTTGACGGTGGCGTTTCAGATATTGGTGAACAGTTTGCCGACGGACAAGCTGACGGTGGAGTCGGTGGAGACGGTGAATAATCTGATATCGTGTACGGTGCAAAAAATCAAAGCCGCGCTCCGGTGTCACGAGACTTCCACGTGA 2262 56.72 MSFAVRFDCSGGGGYGGDDGGDGSLMASGAIAQPRLVTHSSFHKSMFSSPRLSLALTNLDGLGSGEMIPADGGFEVNVRRRSREEEPAESRSGSDNMDGGGGCGSGDDLDAAAAVGDNPRKKKRYHRHTPQQIQELEAMFKECPHPDEKQRLELSRRLSLETKQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMAIREAIRNPICSTCGGPAMIGEISLEEQQLRIENARLKEELERVCGLAGKFLGRPIPVASSPPLELGVGSNLEEFGGGMMERSVYLEMALAAMDELVKMADGEEPLWIGEKVNEEEYVRMFSGGCVGIKPNGFVSEGSRESGIVIINSSALVETLMDSNRWVEMFPNLVATAATTDVISGGMGGTRNGALQLMHAELQILSPMVPVRQLSFLRFCKQHAEGVWAVVDVSINAVTETSSPPCRRLPSGCLIHDMPNGYSKVTWVEHSQYDESHIHEMYRPLVGSGLGFGARRWITTLQRQCECLAILISAPSDHSGISASGRRSMVKLAQRMTANFCAGVCASTVYKWNKLNTGNNVGEDVRVMTRKSVDDPGEPPGTVLSAATSVWVAMAAERVFEFLRDERLRSEWDILSNGGPMQEMLHIPKAQHHANAVSLLRASSLNPSQNSMLILQETCTDPSGSLVVYAPVDIPAMQVVMNGGDSAYVALLPSGFAVVPAGDGGGGGGSLLTVAFQILVNSLPTDKLTVESVETVNNLISCTVQKIKAALRCHETST 753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2084203 2089743 - Lag0020784.1 Lac7g0267 613168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0267 753 ProSiteProfiles START domain profile. 278 505 IPR002913 GO:0008289(InterPro)
Lac7g0267 753 SMART HOX_1 120 183 IPR001356 GO:0003677(InterPro)
Lac7g0267 753 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 110 748 IPR042160 -
Lac7g0267 753 Pfam START domain 288 502 IPR002913 GO:0008289(InterPro)
Lac7g0267 753 CDD homeodomain 122 179 IPR001356 GO:0003677(InterPro)
Lac7g0267 753 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677(InterPro)
Lac7g0267 753 Coils Coil 173 208 - -
Lac7g0267 753 SMART START_1 287 502 IPR002913 GO:0008289(InterPro)
Lac7g0267 753 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Lac7g0267 753 Pfam Homeodomain 122 177 IPR001356 GO:0003677(InterPro)
Lac7g0267 753 MobiDBLite consensus disorder prediction 70 129 - -
Lac7g0267 753 SUPERFAMILY Bet v1-like 520 736 - -
Lac7g0267 753 SUPERFAMILY Homeodomain-like 107 179 IPR009057 -
Lac7g0267 753 Gene3D - 111 195 - -
Lac7g0267 753 MobiDBLite consensus disorder prediction 76 92 - -
Lac7g0267 753 SUPERFAMILY Bet v1-like 280 502 - -
Lac7g0267 753 Coils Coil 220 240 - -
Lac7g0267 753 CDD START_ArGLABRA2_like 282 501 - -
Lac7g0267 753 FunFam Homeobox-leucine zipper protein HDG1 109 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3228 Lac-Chr1:52245567 Lac7g0267 Lac-Chr7:2084203 5.60E-178 dispersed
Lac2g1376 Lac-Chr2:11625358 Lac7g0267 Lac-Chr7:2084203 1.00E-81 dispersed
Lac7g0267 Lac-Chr7:2084203 Lac9g2062 Lac-Chr9:40201422 4.00E-195 dispersed
Lac12g1799 Lac-Chr12:34276663 Lac7g0267 Lac-Chr7:2084203 3.80E-279 transposed
Lac5g2912 Lac-Chr5:47267150 Lac7g0267 Lac-Chr7:2084203 5.60E-216 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24125 PF01852 START 5.90E-48 CL0209 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0267 K09338 - csv:101222248 995.727