Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac7g0304 | ATGGAAGTGAATTTCAACATCTTCACCTTCGTTTCCGTCGCACTACTCACAGTCTCCCTCTTCCTTCTCTCCTTGTTCATTCTCCTCCTCCGAACCCTCGCCGGAAAATCCATTACAAGCTCCGACTACTCCCCGGTGTACGGCACCACCTACGGCCAGGCATTCTACTTCAACAACCTCTACGATCATCTAACGGCGGTGGCGAAGCGGCACCGAACGTTCCGGCTGCTGGCGTCGGCGTACAGCGAGATATACACGGTCGATCCGAGAAACGTCGAGCACATATTGAAGACGAAATTCGACAAGTACTCGAAAGGAAGCAAAGATCAAGAAATCAGCGGGGATCTGTTTGGAGAGGGAATATTTGCGGTGGATGGAGAGAAGTGGAAGCAGCAGAGGAAATTGGCGAGCTATGAATTCTCGACGAGGGTTCTTAGGGATTTTAGCTGCTCTGTTTTCAGACGAAATGCTGCTAAACTTGTTCGACTTCTTTCCCAGCTTTCCACCTCGGGTCGGGTTTTTGATATCCAGGATTTGCTAATGCGATGCTCTTTGGACTCCATTTTCAAAGTCGGGTTCGGCGTGGATTTAGATTGCTTGGAGGAACCAAGCAAAGCTGGGAGCGGGTTCATGAAGGCCTTCGATGATTCTAGCGCTCAGGTTTATTGGCGCTATATCGATCCTTTTTGGAAATTGAAAAGATTTCTCAACATCGGTTCCGAAGCTTCGTTTAGGAACAACGTAAAAGTAATCGATGCTTTTGTGCACCAGTTGATCAGTGACAGGAGAAAATTGCTTCAGCAACCAAATCTCCACTGTTCTTTATCTCAACTTGATTTTGCTGTTCTTACTGGAGTAAAAGAGATCATTTCGAACTCTGTCTTGGTTCTTCTACATGCTATGCAAGAACCCTTAATACAGGAAAAAGTTGCAGAAGAAGTGACACAAATTGTTGGGGTTCAAGGGGAAGAAGCTGATATAAATTTGTTCGTACAAAACTTAACTGATTCAGCTCTCGACAAAATGCATTATCTTCATGCAGCATTGGCAGAGACTCTAAGGCTGTATCCTGCTGTCCCTGTGGATGGAAGGACTGCAGAAGTAGATGACATTCTTCCTAATGGCCATAAACTAAGAAAAGGGGATGGTGTGTACTACATGGCCTATTCCATGGGCAGGATGCCCTGCCTTTGGGGAGAAGATGCTGAAGATTTTAAACCTGAGAGATGGCTTGAAAATGGAACTTTTCGACCCGAATCGCCTTTCAAATTCATCGCATTTCATGCGGGTCCTCGAATGTGTTTGGGAAAGAATTTTGCTTATCGACAAATGAAGATAGTATCTGCTGCTCTCCTTCAATTTTTTCGATTCAAATTAGCTGATCCAACTGGAAATATAACTTATAGGATCATGCTCACCCTTCACATCGATGGAGGTCTCCCACTTGTTGCAATTCCAAGAATACGAAAATTTACCTAA | 1479 | 44.9 | MEVNFNIFTFVSVALLTVSLFLLSLFILLLRTLAGKSITSSDYSPVYGTTYGQAFYFNNLYDHLTAVAKRHRTFRLLASAYSEIYTVDPRNVEHILKTKFDKYSKGSKDQEISGDLFGEGIFAVDGEKWKQQRKLASYEFSTRVLRDFSCSVFRRNAAKLVRLLSQLSTSGRVFDIQDLLMRCSLDSIFKVGFGVDLDCLEEPSKAGSGFMKAFDDSSAQVYWRYIDPFWKLKRFLNIGSEASFRNNVKVIDAFVHQLISDRRKLLQQPNLHCSLSQLDFAVLTGVKEIISNSVLVLLHAMQEPLIQEKVAEEVTQIVGVQGEEADINLFVQNLTDSALDKMHYLHAALAETLRLYPAVPVDGRTAEVDDILPNGHKLRKGDGVYYMAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRMCLGKNFAYRQMKIVSAALLQFFRFKLADPTGNITYRIMLTLHIDGGLPLVAIPRIRKFT | 492 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 2346591 | 2350832 | + | Lag0020821.1 | Lac7g0304 | 613205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac7g0304 | 492 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 427 | 436 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac7g0304 | 492 | Gene3D | Cytochrome P450 | 52 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | SUPERFAMILY | Cytochrome P450 | 54 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | CDD | CYP86A | 72 | 480 | - | - | |
| Lac7g0304 | 492 | PRINTS | P450 superfamily signature | 425 | 434 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | PRINTS | P450 superfamily signature | 347 | 358 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | PRINTS | P450 superfamily signature | 302 | 315 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | PRINTS | P450 superfamily signature | 434 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | PRINTS | E-class P450 group I signature | 434 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | PRINTS | E-class P450 group I signature | 346 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | PRINTS | E-class P450 group I signature | 293 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | PRINTS | E-class P450 group I signature | 424 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | PANTHER | CYTOCHROME P450 | 27 | 480 | - | - | |
| Lac7g0304 | 492 | Pfam | Cytochrome P450 | 57 | 274 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0304 | 492 | Pfam | Cytochrome P450 | 295 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac7g0304 | Lac-Chr7:2346591 | Lac7g2817 | Lac-Chr7:47278181 | 1.70E-61 | dispersed | |
| Lac7g0297 | Lac-Chr7:2277074 | Lac7g0304 | Lac-Chr7:2346591 | 7.00E-111 | proximal | |
| Lac7g0304 | Lac-Chr7:2346591 | Lac7g0306 | Lac-Chr7:2357054 | 1.20E-216 | proximal |
Pathway information