Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac7g0306 | ATGGCCTTCCACTTCAACAACTTCTACGATCATCTAACGGCGGTGGCGAAGCGGCAACAAACCTTCCGGCTGCTTGCGTCGGCGCACAGCGAAGTATACACGGTCGATCCGAGAAACATCGAGCACATACTGAAGACGAAGTTCGACAAGTACTCGAAAGGAAGCAAAGATCAAGAAATCTTAGGGGATCTGTTTGGAGAGGGGATTTTTGCAGTGGATGGAGAGAAGTGGAAGCAGCAGAGGAAATTGGCGAGCTATGAATTCTCGACGAGGGTTCTTAGGGATTTTAGTTGCTCTGTTTTCAGGCAAAATGCTACTAAACTTGTTGGAGTTCTTTCGGAGTTTTCCAGCACGGATCGGGTTTTCGATATCCAGGATTTGCTAATGCGATGTTCTTTGGACTCCATTTTCAAAGTTGGGTTCGGCGTAGATTTAGGTTGCTTGGAGGAACCAAGCAAAGCAGGGAGCGGCTTCATGAAGGCCTTTGATGATTCTAACGCTCAGGTTTTTTGGCGCTACATCGATCCTTTTTGGAAATTGAAAAGATTTCTCAATATCGGTTCCGAAGCTTCATTTAGGAACAATGTAAAACTTGTCAATGCTTTTGTGCACCAGTTGATCAGTGACAGGAGAAAATTGCTTCAGCAACCAAATCTCAATGACAAAGAGGACATACTTTCGAGGTTTCTGATGGAAAGTGAGAAGGATCCAATAAGAATGAATGATCAATATCTAAGAGATATAGTCCTGAATTTCATGTTGGCTGGCAGGGATACAAGTGCAGGAACTCTGTCTTGGTTCTTCTACATGCTCTGCAAGAACCCTTTAATACAGGAAAAAGTTGCAGAAGAAGTGACACAAATTGTTGGGGTTCAAGGAGAAGAAGCTGATATAAATTTGTTCGTACAGAACTTAACTGATTCAGCTCTCGACAAAATGCATTATCTTCATGCAGCATTGACAGAGACTCTAAGGCTCTATCCTGCAGTCCCTGTGGATGGAAGGACGGCAGAAATTGATGACATTCTTCCTGATGGATGCAAGGTAAGAAAAGGGGATGGAGTAAACTACTTGGCCTATTCCATGGGCAGGATGCCCTGTCTTTGGGGAGAAGATGCTGAAGATTTTAAACCTGAGAGATGGCTTGAAAATGGAACTTTTCGACCCGAATCGCCGTTCAAATTCATCGCATTTCATGCGGGTCCTCGAATGTGTTTGGGAAAGGATTTTGCTTACCGACAAATGAAGATAGTATCTGCTGCACTGCTTCAATTTTTTCGATTCAAATTAGCTGATCCAACCAGAAATGTAACTTATAGGATCATGCTCACCATTCACATCGATGGAGGTCTCCCACTTCTTGCGATTCCAAGAATAAGAAAATTTACCTAA | 1392 | 43.25 | MAFHFNNFYDHLTAVAKRQQTFRLLASAHSEVYTVDPRNIEHILKTKFDKYSKGSKDQEILGDLFGEGIFAVDGEKWKQQRKLASYEFSTRVLRDFSCSVFRQNATKLVGVLSEFSSTDRVFDIQDLLMRCSLDSIFKVGFGVDLGCLEEPSKAGSGFMKAFDDSNAQVFWRYIDPFWKLKRFLNIGSEASFRNNVKLVNAFVHQLISDRRKLLQQPNLNDKEDILSRFLMESEKDPIRMNDQYLRDIVLNFMLAGRDTSAGTLSWFFYMLCKNPLIQEKVAEEVTQIVGVQGEEADINLFVQNLTDSALDKMHYLHAALTETLRLYPAVPVDGRTAEIDDILPDGCKVRKGDGVNYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRMCLGKDFAYRQMKIVSAALLQFFRFKLADPTRNVTYRIMLTIHIDGGLPLLAIPRIRKFT | 463 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 2357054 | 2361787 | + | Lag0020823.1 | Lac7g0306 | 613207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac7g0306 | 463 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 398 | 407 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac7g0306 | 463 | PRINTS | P450 superfamily signature | 396 | 405 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | PRINTS | P450 superfamily signature | 405 | 416 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | PRINTS | P450 superfamily signature | 255 | 272 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | PRINTS | P450 superfamily signature | 318 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | Pfam | Cytochrome P450 | 6 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | Gene3D | Cytochrome P450 | 4 | 453 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | PRINTS | E-class P450 group I signature | 244 | 261 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | PRINTS | E-class P450 group I signature | 405 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | PRINTS | E-class P450 group I signature | 317 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | PRINTS | E-class P450 group I signature | 395 | 405 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | PRINTS | E-class P450 group I signature | 264 | 290 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | SUPERFAMILY | Cytochrome P450 | 6 | 458 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0306 | 463 | CDD | CYP86A | 20 | 451 | - | - | |
| Lac7g0306 | 463 | PANTHER | CYTOCHROME P450 | 3 | 451 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac6g1555 | Lac-Chr6:20484787 | Lac7g0306 | Lac-Chr7:2357054 | 1.40E-54 | dispersed | |
| Lac7g0297 | Lac-Chr7:2277074 | Lac7g0306 | Lac-Chr7:2357054 | 4.50E-126 | dispersed | |
| Lac7g0306 | Lac-Chr7:2357054 | Lac7g2817 | Lac-Chr7:47278181 | 5.30E-81 | dispersed | |
| Lac7g0304 | Lac-Chr7:2346591 | Lac7g0306 | Lac-Chr7:2357054 | 1.20E-216 | proximal |
Pathway information