Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0309 ATGGAGACCAATCTGGCCGCCGCCGCCGCCGTCGACATCAACACCACAAACATCCCGCCGGAGAAACGGAGCCGTTCCATCTTCGACGTCGCACCAGACTTCTTCGATTCCTGCAAACTCCTTCGTTCTCCATACGCATACACCTCATCAACCAGCGGCAGCTACAGGGATAGCGCAAGCGCAGAAAATCCAGTCGATTCGGAGCAGAACTCTAGGGATTTCAAAGAAAGTTCCGTCGCCCACAGATGGACCTGCAACACATGTAAGGCCGAGTTCGAGTCCCTGCTCGACCAGCGTTCGCACTTCAAATCCGACCTACACCGGTTCAATGTGAAACTAAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTATGATGTGTCAAGTATTTCTGGATCAGAGGATGAAACAGAGAAGGAGATTTACTCTCGGAATGAAGGGTCCAAGGGAACGAGTGAAAATGTGAACAAGAAGAGGTTGTTTGTTCATCTTCAAACAGGTGAAAGAGTTTCGGTTTGGAAGTGTTTGCTCATAAATGAGTCGGATAATATTTCGTATGAAGATGATAAAACATCAGTCAGTGGTAATGGCTTTCATGCGCAGTACCTTAGAGAGAATGAAGTCATAGCAAGATTAAAATATTTAAATCATGAGCCAAGAGATGGCACCCGTTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTTGCCGGTTGTGTTTTTGATGGGAACTCGGTTGTAGCTCATAAAACCTTTCACAGATATGTGGTGAGAGCCAAATCTGGAAAGAAGCAATCATCGAAAGATGCAAGTGGCAAATCAATCAGTTCTGCTGGGGCTTCACTTCGTCGTCATAATGAACAGGCATTGAAGAAGGAAATTCAAGATCTCCTTGCTGCTTGGAAGTCCTATTTTAATGCTTCATCTTGTGTTTATATTTATGCTCCTTCAAACAACCGGCAATTGCTTTTTAATGGGGACAAGCCATATTTTAGTGATCAGCACTCTGCTGTTCGGAATATTCCTTTGACTGTTCGAAGGCCTACATTGAAAGAAGCCCGGCGTGTTTATGAACAATTGGTTCAAATAGTGTATGAAGTAGATGAGAAGGAAGTATTGTCCAAGTCCACCAGTGAGCACAATTCACTGTTAAGTGCAGTTACAACAGACAATAGCACCCAAGATATAAGTGAAAAGAAAGCCATTGGAGACCTGGAAAAGGGTGCTTCTACACATGTTGGAGAATCTGTTGAACCCCCCGTATGTAGTGAGAATGAAAGTGAAGTTATTTGTAGAACTACACCTTTGCATGACGCATCACAATCTGGAAATGCAGATAAGGTTTTGGAACTCCTCGAACAGGGTCTTGATCCTTGCATCAAAGATGAAAGAGGACGTACTCCTTACATGCTAGCAACTGAGAAGGAAGTCCGAAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGAATGCTGCTAAGGTGCCCAGCGCATTAACTAAGGAAATGGAGGAATCTCAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGCGAAAGGCAAGAGCGAAGGAATTGAAGAAATTAAAGAAAGAAAAGGCTAAGAAAGCACAGGCCGAGGCTGCTGAATCTCAAAAGGAGGTGAAGGTGGAACAGAGTAGAGGAATCGGTTCTATTTTGAATTCTCGGACTGAATCAACCAGTGGAAAACTGATTACCAAAGAGATGGCACAGGCAGCTGAACGGGAAAAGAGAGCAGCAGCTGCCGAGAAGAGAATCGCAGCTATGGCCGCAGCTGCAGCCACCAACGGTTCCTCGTCAACTACTCCGAACAGTTCACAGACTAAAACCGGGTTAGCGGGGGATGTCAACTGTTCCTGTTGCGGTACATCGTTGGCCGGTAAAGTTCCTTTCCACCGATTATTTGAAGTTTCAATGATATCTGCTCTTTCTTTTTGGGATTCTTGTATTTGCCTCATTGTTGATGAAAAGATTGAAGCTTCAATGTAG 2055 44.53 METNLAAAAAVDINTTNIPPEKRSRSIFDVAPDFFDSCKLLRSPYAYTSSTSGSYRDSASAENPVDSEQNSRDFKESSVAHRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDYDVSSISGSEDETEKEIYSRNEGSKGTSENVNKKRLFVHLQTGERVSVWKCLLINESDNISYEDDKTSVSGNGFHAQYLRENEVIARLKYLNHEPRDGTRLRIVLLASGGHFAGCVFDGNSVVAHKTFHRYVVRAKSGKKQSSKDASGKSISSAGASLRRHNEQALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQHSAVRNIPLTVRRPTLKEARRVYEQLVQIVYEVDEKEVLSKSTSEHNSLLSAVTTDNSTQDISEKKAIGDLEKGASTHVGESVEPPVCSENESEVICRTTPLHDASQSGNADKVLELLEQGLDPCIKDERGRTPYMLATEKEVRNNFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAEAAESQKEVKVEQSRGIGSILNSRTESTSGKLITKEMAQAAEREKRAAAAEKRIAAMAAAAATNGSSSTTPNSSQTKTGLAGDVNCSCCGTSLAGKVPFHRLFEVSMISALSFWDSCICLIVDEKIEASM 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2372564 2377708 + Lag0020826.1 Lac7g0309 613210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0309 684 MobiDBLite consensus disorder prediction 522 536 - -
Lac7g0309 684 MobiDBLite consensus disorder prediction 141 158 - -
Lac7g0309 684 ProSiteProfiles Ankyrin repeat profile. 443 475 IPR002110 GO:0005515(InterPro)
Lac7g0309 684 MobiDBLite consensus disorder prediction 280 294 - -
Lac7g0309 684 Pfam Bacteroidetes VLRF1 release factor 239 375 IPR041175 -
Lac7g0309 684 MobiDBLite consensus disorder prediction 49 67 - -
Lac7g0309 684 MobiDBLite consensus disorder prediction 547 563 - -
Lac7g0309 684 ProSitePatterns Zinc finger C2H2 type domain signature. 85 107 IPR013087 -
Lac7g0309 684 Coils Coil 519 569 - -
Lac7g0309 684 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 21 656 IPR047139 GO:0030433(PANTHER)
Lac7g0309 684 MobiDBLite consensus disorder prediction 49 73 - -
Lac7g0309 684 MobiDBLite consensus disorder prediction 517 563 - -
Lac7g0309 684 Gene3D - 397 555 IPR036770 -
Lac7g0309 684 MobiDBLite consensus disorder prediction 140 164 - -
Lac7g0309 684 MobiDBLite consensus disorder prediction 275 294 - -
Lac7g0309 684 SUPERFAMILY Ankyrin repeat 445 497 IPR036770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0309 Lac-Chr7:2372564 Lac9g0659 Lac-Chr9:13188993 3.80E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0309 K26089 - csv:101216211 964.911