Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0309 | ATGGAGACCAATCTGGCCGCCGCCGCCGCCGTCGACATCAACACCACAAACATCCCGCCGGAGAAACGGAGCCGTTCCATCTTCGACGTCGCACCAGACTTCTTCGATTCCTGCAAACTCCTTCGTTCTCCATACGCATACACCTCATCAACCAGCGGCAGCTACAGGGATAGCGCAAGCGCAGAAAATCCAGTCGATTCGGAGCAGAACTCTAGGGATTTCAAAGAAAGTTCCGTCGCCCACAGATGGACCTGCAACACATGTAAGGCCGAGTTCGAGTCCCTGCTCGACCAGCGTTCGCACTTCAAATCCGACCTACACCGGTTCAATGTGAAACTAAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTATGATGTGTCAAGTATTTCTGGATCAGAGGATGAAACAGAGAAGGAGATTTACTCTCGGAATGAAGGGTCCAAGGGAACGAGTGAAAATGTGAACAAGAAGAGGTTGTTTGTTCATCTTCAAACAGGTGAAAGAGTTTCGGTTTGGAAGTGTTTGCTCATAAATGAGTCGGATAATATTTCGTATGAAGATGATAAAACATCAGTCAGTGGTAATGGCTTTCATGCGCAGTACCTTAGAGAGAATGAAGTCATAGCAAGATTAAAATATTTAAATCATGAGCCAAGAGATGGCACCCGTTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTTGCCGGTTGTGTTTTTGATGGGAACTCGGTTGTAGCTCATAAAACCTTTCACAGATATGTGGTGAGAGCCAAATCTGGAAAGAAGCAATCATCGAAAGATGCAAGTGGCAAATCAATCAGTTCTGCTGGGGCTTCACTTCGTCGTCATAATGAACAGGCATTGAAGAAGGAAATTCAAGATCTCCTTGCTGCTTGGAAGTCCTATTTTAATGCTTCATCTTGTGTTTATATTTATGCTCCTTCAAACAACCGGCAATTGCTTTTTAATGGGGACAAGCCATATTTTAGTGATCAGCACTCTGCTGTTCGGAATATTCCTTTGACTGTTCGAAGGCCTACATTGAAAGAAGCCCGGCGTGTTTATGAACAATTGGTTCAAATAGTGTATGAAGTAGATGAGAAGGAAGTATTGTCCAAGTCCACCAGTGAGCACAATTCACTGTTAAGTGCAGTTACAACAGACAATAGCACCCAAGATATAAGTGAAAAGAAAGCCATTGGAGACCTGGAAAAGGGTGCTTCTACACATGTTGGAGAATCTGTTGAACCCCCCGTATGTAGTGAGAATGAAAGTGAAGTTATTTGTAGAACTACACCTTTGCATGACGCATCACAATCTGGAAATGCAGATAAGGTTTTGGAACTCCTCGAACAGGGTCTTGATCCTTGCATCAAAGATGAAAGAGGACGTACTCCTTACATGCTAGCAACTGAGAAGGAAGTCCGAAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGAATGCTGCTAAGGTGCCCAGCGCATTAACTAAGGAAATGGAGGAATCTCAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGCGAAAGGCAAGAGCGAAGGAATTGAAGAAATTAAAGAAAGAAAAGGCTAAGAAAGCACAGGCCGAGGCTGCTGAATCTCAAAAGGAGGTGAAGGTGGAACAGAGTAGAGGAATCGGTTCTATTTTGAATTCTCGGACTGAATCAACCAGTGGAAAACTGATTACCAAAGAGATGGCACAGGCAGCTGAACGGGAAAAGAGAGCAGCAGCTGCCGAGAAGAGAATCGCAGCTATGGCCGCAGCTGCAGCCACCAACGGTTCCTCGTCAACTACTCCGAACAGTTCACAGACTAAAACCGGGTTAGCGGGGGATGTCAACTGTTCCTGTTGCGGTACATCGTTGGCCGGTAAAGTTCCTTTCCACCGATTATTTGAAGTTTCAATGATATCTGCTCTTTCTTTTTGGGATTCTTGTATTTGCCTCATTGTTGATGAAAAGATTGAAGCTTCAATGTAG | 2055 | 44.53 | METNLAAAAAVDINTTNIPPEKRSRSIFDVAPDFFDSCKLLRSPYAYTSSTSGSYRDSASAENPVDSEQNSRDFKESSVAHRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDYDVSSISGSEDETEKEIYSRNEGSKGTSENVNKKRLFVHLQTGERVSVWKCLLINESDNISYEDDKTSVSGNGFHAQYLRENEVIARLKYLNHEPRDGTRLRIVLLASGGHFAGCVFDGNSVVAHKTFHRYVVRAKSGKKQSSKDASGKSISSAGASLRRHNEQALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQHSAVRNIPLTVRRPTLKEARRVYEQLVQIVYEVDEKEVLSKSTSEHNSLLSAVTTDNSTQDISEKKAIGDLEKGASTHVGESVEPPVCSENESEVICRTTPLHDASQSGNADKVLELLEQGLDPCIKDERGRTPYMLATEKEVRNNFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAEAAESQKEVKVEQSRGIGSILNSRTESTSGKLITKEMAQAAEREKRAAAAEKRIAAMAAAAATNGSSSTTPNSSQTKTGLAGDVNCSCCGTSLAGKVPFHRLFEVSMISALSFWDSCICLIVDEKIEASM | 684 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2372564 | 2377708 | + | Lag0020826.1 | Lac7g0309 | 613210 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 522 | 536 | - | - | |
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 141 | 158 | - | - | |
Lac7g0309 | 684 | ProSiteProfiles | Ankyrin repeat profile. | 443 | 475 | IPR002110 | GO:0005515(InterPro) | |
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 280 | 294 | - | - | |
Lac7g0309 | 684 | Pfam | Bacteroidetes VLRF1 release factor | 239 | 375 | IPR041175 | - | |
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 49 | 67 | - | - | |
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 547 | 563 | - | - | |
Lac7g0309 | 684 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 85 | 107 | IPR013087 | - | |
Lac7g0309 | 684 | Coils | Coil | 519 | 569 | - | - | |
Lac7g0309 | 684 | PANTHER | ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 21 | 656 | IPR047139 | GO:0030433(PANTHER) | |
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 49 | 73 | - | - | |
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 517 | 563 | - | - | |
Lac7g0309 | 684 | Gene3D | - | 397 | 555 | IPR036770 | - | |
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 140 | 164 | - | - | |
Lac7g0309 | 684 | MobiDBLite | consensus disorder prediction | 275 | 294 | - | - | |
Lac7g0309 | 684 | SUPERFAMILY | Ankyrin repeat | 445 | 497 | IPR036770 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac7g0309 | Lac-Chr7:2372564 | Lac9g0659 | Lac-Chr9:13188993 | 3.80E-35 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g0309 | K26089 | - | csv:101216211 | 964.911 |