Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0319 ATGAGCTCAAGGCGCAGTGGCGGAGGTTGCGCGGGAGGCAATGGTGGCAGCGGACCGTGTGGGGCGTGCAAGTTTCTACGGAGGAAGTGTCTGCCGGGGTGTATATTTGCACCGTACTTCGGTTCTGAACAAGGCACAGCTCATTTTGCAGCCGTGCACAAGGTGTTTGGAGCCAGCAATGTGTCGAAGCTGCTTCTACATATTCCTGAACACAAGCGGCTCGACGCCGCTATAACTATATGCTACGAGGCACAAGCTCGAGTCAGAGAGCCAGTTTTTGGCTGTGTTGCTCATATCTTTGCTCTTCAACAACAGGCTGCGAGGTTGCGAGCAGAGCTCTCATACTTGCAAGCGTACCTAGCAACATCTGAGCTGCCAAGACCTGCACCCCATCCACTGGCACAGCCATCAGCTCAGATCAAGCCATCTATGCCCTCAATTGTAAGCCTTCCATCAGCTTGCCCTTCCTCGCCTGGTGTGTCAGATCTTTCGCTACTGCTCGATCCAGTGGAGCAAGCTTCACCGGAAAAATTGCAGTCTCCATTGGAATTGTATCAAATTGGAAGCAACAGTTTCCCATCCATGGGTAGCAGGGAACAACAACTTGTCCAAAAACAACTGTCCTCAATGCAATGCATTGGCACCTCGCTATTTCCGTACCATCCTAAACGAGCCTAA 678 51.77 MSSRRSGGGCAGGNGGSGPCGACKFLRRKCLPGCIFAPYFGSEQGTAHFAAVHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLRAELSYLQAYLATSELPRPAPHPLAQPSAQIKPSMPSIVSLPSACPSSPGVSDLSLLLDPVEQASPEKLQSPLELYQIGSNSFPSMGSREQQLVQKQLSSMQCIGTSLFPYHPKRA 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2464212 2465068 - Lag0020836.1 Lac7g0319 613220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0319 225 PANTHER LOB DOMAIN CONTAINING PROTEIN 16 139 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Lac7g0319 225 Pfam Lateral organ boundaries (LOB) domain 19 117 IPR004883 -
Lac7g0319 225 ProSiteProfiles LOB domain profile. 18 120 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g1886 Lac-Chr12:35395275 Lac7g0319 Lac-Chr7:2464212 4.60E-40 dispersed
Lac13g1006 Lac-Chr13:8504206 Lac7g0319 Lac-Chr7:2464212 2.50E-33 dispersed
Lac4g1874 Lac-Chr4:38028577 Lac7g0319 Lac-Chr7:2464212 5.50E-37 dispersed
Lac7g0319 Lac-Chr7:2464212 Lac7g2139 Lac-Chr7:35070905 2.70E-38 dispersed
Lac12g1883 Lac-Chr12:35332115 Lac7g0319 Lac-Chr7:2464212 2.60E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24129 PF03195 LOB 4.30E-36 No_clan Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0319 K21994 - csv:101216934 336.265