Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0325 ATGGACTTCGATCCTCAGGCTCAGAAGAGCTCCGACGATTCGTCAACGTCTTCGAAGCTGGTTCTGTATTCTTTCTGGCAGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCCTTGAACCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTAGATCTTGGAAGAGGAGAACAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTTAAGTATGTTCCTGTATTAGTAGATGGTCCCGTGGTAGTTACAGACTCTTACGCGATTTTGCTGTATTTGGAAGAGAAATATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCATTTAAAATCTCTTAATCTGCAAGTGGCAAGTATCGTCAGCTCAAGCATACAACCTCTTCATATGTTGGGATTGCTGAGAACTATCGAGGAAAATTTTGGTCCAGAAGAGCAACTACCATGGGCTCAGTCTAATATAGAAAAAGGTTTCAATGGTCTTGAGAAACTGCTGAAGGATTTTTCTGGCCGTTATGCCTTGGGAGATGAAGTATATATGGCTGATGTATTTTTGGCCCCCCAATTTTCAATTGCTTCTGGGAGGTTCAACATTGACACGTCCAAGTTTCCCACTTTAGCGAGGATTTTTGAATCTTACAAGACGTTACCAGAATTCCAAGCCTCCTCACCAGAAAGGCAACCCGACGCCCTTCATTAG 690 44.49 MDFDPQAQKSSDDSSTSSKLVLYSFWQSSCSWRVRFALNLKGLSYEYRAVDLGRGEQLSPDFERLNPLKYVPVLVDGPVVVTDSYAILLYLEEKYPQKALLPADLHLKSLNLQVASIVSSSIQPLHMLGLLRTIEENFGPEEQLPWAQSNIEKGFNGLEKLLKDFSGRYALGDEVYMADVFLAPQFSIASGRFNIDTSKFPTLARIFESYKTLPEFQASSPERQPDALH 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2514038 2517194 + Lag0020842.1 Lac7g0325 613226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0325 229 SUPERFAMILY Thioredoxin-like 18 102 IPR036249 -
Lac7g0325 229 Pfam Glutathione S-transferase, N-terminal domain 22 98 IPR004045 -
Lac7g0325 229 PANTHER MALEYLACETOACETATE ISOMERASE 18 227 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Lac7g0325 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 99 IPR004045 -
Lac7g0325 229 SUPERFAMILY GST C-terminal domain-like 100 227 IPR036282 -
Lac7g0325 229 Gene3D Glutaredoxin 22 98 - -
Lac7g0325 229 Gene3D - 101 229 - -
Lac7g0325 229 CDD GST_C_Zeta 105 224 IPR034330 -
Lac7g0325 229 SFLD Main (cytGST) 20 209 - -
Lac7g0325 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 229 IPR010987 -
Lac7g0325 229 NCBIfam maleylacetoacetate isomerase 22 227 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Lac7g0325 229 FunFam Maleylacetoacetate isomerase 103 229 - -
Lac7g0325 229 FunFam Glutathione S-transferase Z1 18 102 - -
Lac7g0325 229 SFLD Glutathione Transferase (cytosolic) 20 209 IPR040079 -
Lac7g0325 229 CDD GST_N_Zeta 20 92 IPR034333 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0325 Lac-Chr7:2514038 Lac9g0139 Lac-Chr9:2115364 2.30E-69 dispersed
Lac7g0325 Lac-Chr7:2514038 Lac10g0068 Lac-Chr10:564245 2.50E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0325 K01800 - csv:101213403 370.933