Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0352 ATGCTCTCTTCCCACATCACTCCTTCAAAAAATCCCCTCTCCACCAACCCCACTTCCCCTTTTCCTCTCTCCTTCCCAAATCTCCTCCCAACCGTCCGATCAAAACCCCCCCGTCGCCCCCAAATCTCCTCCTCCGCCGCCATTAATGGCGTCTCTTCAAAACCCACTTCTCAGTTTCTCAATCCAATCTCCAAATCGAGCAGATTCTGCAAAAATCCTGCGAACCCATTTAGGGTTTTTCCGTCTAAATCCAACCCCATTGTCCCCGCCGCTGCCGCTGCCGACGGCGGCGATACCACCGCCGATTCCGCCTCCAATAGCAAAACCCTTCAGCTCGCCGTCGTGTTCGGGCTCTGGTATTTCCAGAACATCGTCTTCAATATCTTCAACAAGAAGGTTCTCAACATCTTCCCTTTCCCATGGCTTCTCGCTTCGTTTCAGCTCTTCGCTGGATCAGTTTGGATGCTCGTTCTTTGGTCGTTGAAGCTTCAGCCATGCCCTAAAATTTCTAAGCCGTTCATAATCGCTCTCCTCGGCCCCGCTTTGTTTCACACAATCGGCCATATCTCCGCCTGTGTTTCGTTCTCGAAAGTCGCCGTTTCTTTCACACACGTCATTAAATCGGCTGAACCAGTCTTCTCGGTTCTGTTCTCCTCGTTCCTCGGCGATTCGTATCCATTACAGGTCTGGCTCTCGATTCTCCCCATTGTCTTTGGCTGCTCTCTGGCCGCCATTACTGAAGCTTCCTTCAATCTCGAAGGTCTGTCAGGCGCCATGATCAGCAATGTAGGGTTTGTTCTAAGAAACATTTACTCCAAAAGAAGCTTGCAGAGCTTCAAGGAGGTTAATGGGTTGAATTTATATGGTTGGATTAGTATAATTTCTTTGTTGTATCTGTTTCCTGTGGCCATTTTCGTTGAAGGGTCGAAATGGGTTCAAGGATATCATCAAGCAATTGCTTCCATTGGAAATGCTTCAACATTATATATCTGGGTTTTGATTTCTGGAATCTTTTATCATCTTTATAATCAATCTTCTTACCAAGCTTTGGATGAGATCAGTCCTTTGACATTCTCTGTTGGGAATACGATGAAGAGAGTGGTTGTGATTGTGTCTTCTGTGTTGGTTTTTAGAAATCCAATTAGGCCTTTGAATGCTGTGGGTTCTGCCATTGCCATTTTTGGGACTTTTCTGTATTCTCAGACGACGACGAAGAAGAGTGCTAAGAAGATTGAGGAAGGTGAAAAGAAGGATTGA 1257 46.46 MLSSHITPSKNPLSTNPTSPFPLSFPNLLPTVRSKPPRRPQISSSAAINGVSSKPTSQFLNPISKSSRFCKNPANPFRVFPSKSNPIVPAAAAADGGDTTADSASNSKTLQLAVVFGLWYFQNIVFNIFNKKVLNIFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPLQVWLSILPIVFGCSLAAITEASFNLEGLSGAMISNVGFVLRNIYSKRSLQSFKEVNGLNLYGWISIISLLYLFPVAIFVEGSKWVQGYHQAIASIGNASTLYIWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPIRPLNAVGSAIAIFGTFLYSQTTTKKSAKKIEEGEKKD 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2718983 2720239 - Lag0020869.1 Lac7g0352 613253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0352 418 MobiDBLite consensus disorder prediction 1 53 - -
Lac7g0352 418 MobiDBLite consensus disorder prediction 37 53 - -
Lac7g0352 418 MobiDBLite consensus disorder prediction 1 22 - -
Lac7g0352 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 401 - -
Lac7g0352 418 PANTHER SOLUTE CARRIER FAMILY 35 106 402 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Lac7g0352 418 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 110 409 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac7g0352 418 Pfam Triose-phosphate Transporter family 110 400 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0453 Lac-Chr10:3570935 Lac7g0352 Lac-Chr7:2718983 5.90E-63 dispersed
Lac2g1379 Lac-Chr2:11655710 Lac7g0352 Lac-Chr7:2718983 6.20E-86 dispersed
Lac5g1426 Lac-Chr5:28551689 Lac7g0352 Lac-Chr7:2718983 5.50E-87 dispersed
Lac7g0352 Lac-Chr7:2718983 Lac8g2577 Lac-Chr8:43434270 1.90E-66 dispersed
Lac7g0352 Lac-Chr7:2718983 Lac1g3227 Lac-Chr1:52232091 9.00E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0352 K15283 - csv:101219051 697.197