Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0365 ATGGCTGGCCACTTGGGCTCTGCTTCTCACTTCGTTCATCAACTTCAGCACCGTTCTGTCGATCTACAACTGCAGCGGCCGCCGGACGCCGACGACGGTTCTGACCAGTTCCACGGCGGCGATGACGACCACAACAACTCCCACCAACCCAACTCCGGCGGCGAAATCGTGGCCCGCCGCCCGAGAGGCCGACCGCCCGGTTCGAAAAATAAACCGAAGCCACCGGTTATTATCACCAGAGAAAGCGCCAACACCCTTCGAGCCCACATCTTGGAAGTCAACACCGGTTGCGATGTCTTTGACTCGGTGGCCACGTATGCTCGTAAGCGCCAACGTGGGATCTGCATCCTGAGCGGTACCGGCGCCGTCACCAACGTCACCTTACGGCAACCTGCGTCGGCCGGCGCCGTTGTCACGCTCCACGGCAGGTTTGAGATATTGTCTTTGTCGGGATCGTTTCTACCACCACCGGCTCCGCCAGGTGCCACGAGTTTGACTATCTTCCTTGCCGGAGGGCAAGGGCAAATCGTCGGAGGAAATGTTGTCGGCTCTTTGATTGCTTCGGGACCAGTGATCGTTATCGCGTCGTCGTTTACCAATGTTGCCTACGAGAGGCTGCCGTTGGACGAGGAGGAACCGTCCAACGGCGGTGATGGCGGCGGTAGTGGCGGTGGAGGGAGCCTTAGTAACCCGTTTCCGGACCCGTCGGCCGGGTTGCCGTTCTTTAATCTGCCGTTGAACATGTCGGGGAATCAAAACCAGCTGCCGGTGGACGGATGGGGCGGAGGGAACTCCGGCGGGAGAGCATCTTATTGA 816 59.56 MAGHLGSASHFVHQLQHRSVDLQLQRPPDADDGSDQFHGGDDDHNNSHQPNSGGEIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICILSGTGAVTNVTLRQPASAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGDGGGSGGGGSLSNPFPDPSAGLPFFNLPLNMSGNQNQLPVDGWGGGNSGGRASY 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2817085 2818066 + Lag0020882.1 Lac7g0365 613266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0365 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 220 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Lac7g0365 271 MobiDBLite consensus disorder prediction 31 45 - -
Lac7g0365 271 MobiDBLite consensus disorder prediction 16 76 - -
Lac7g0365 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 87 199 IPR005175 -
Lac7g0365 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 211 - -
Lac7g0365 271 FunFam AT-hook motif nuclear-localized protein 86 213 - -
Lac7g0365 271 CDD DUF296 87 198 IPR005175 -
Lac7g0365 271 Gene3D - 86 214 - -
Lac7g0365 271 ProSiteProfiles PPC domain profile profile. 83 220 IPR005175 -
Lac7g0365 271 MobiDBLite consensus disorder prediction 209 245 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2192 Lac-Chr11:38051316 Lac7g0365 Lac-Chr7:2817085 1.60E-61 dispersed
Lac12g1878 Lac-Chr12:35278159 Lac7g0365 Lac-Chr7:2817085 3.20E-61 dispersed
Lac5g0267 Lac-Chr5:2603522 Lac7g0365 Lac-Chr7:2817085 4.70E-79 dispersed
Lac7g0316 Lac-Chr7:2435494 Lac7g0365 Lac-Chr7:2817085 3.80E-58 dispersed
Lac7g0365 Lac-Chr7:2817085 Lac7g0635 Lac-Chr7:5083327 6.10E-61 dispersed
Lac13g0296 Lac-Chr13:2094686 Lac7g0365 Lac-Chr7:2817085 3.20E-16 transposed
Lac11g2404 Lac-Chr11:40314016 Lac7g0365 Lac-Chr7:2817085 1.30E-79 wgd
Lac12g1943 Lac-Chr12:36229761 Lac7g0365 Lac-Chr7:2817085 3.80E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0365 - - - 0.0