Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac7g0373 | ATGGAGGCGAGTTGGGTTTTGGCGGCGGCCGTGACGGCGGCGGCGGCGGTGGCGGGGTTGACGGTGGTGAAGTGGGCGGCGAAGAGCCTGAATGAGTGGATATATGAGGCGAAATTGGGCGACCGGCGGATGGCTCTGCCGCCGGGGGACTTGGGATGGCCTCTTATTGGGAATATGTTGGCTTTCTTTAGAGCCTTCAAGTCTAAGAATCCTGAAACCTTCATTGATAGCTATGTTTCCAGGTTTGGGAAAATCGGAGTCTACAAGGTTCACTTATTTGGAAACCCTAGCGTGGTCGTAACGACGCCGGAGACATGCCGGAAAGTTTTGACAGACGACGAAGCCTTTCAGCCCGGTTGGCCACGCGCCGCCATAGAACTCATCGGAAAGAAGTCCTTCATCGAAATGCCGGTGGAGGAACACAAGCGCCTCCGCCGCTTAACCGCTGCTCCAGTGAACGGCTTCGAGGCGCTGAGCAATTACATTCCTTACATCGAAGAGAACGTCTTGAAATCGTTGGAGAAATGGTCCAATATGGGGCCAATCGAATTCTTAACTCAACTTCGTAAGCTCACGTTCACCATTATCATGTACATTTTCCTCAGCACCGAGAGCGAATCGGTAATGGAGTCGTTGGAGAAGGAGTACACTCGGCTTAATTACGGCGTTCGAGCCCTAAGAATTAACCTACCTGGATTTGCTTATCACAAAGCACTCAAGGCTCGGAAGAATCTTGTGGCTGCGTTGCAAGGAATTGTGACTGATCGAAGAAACCGAAGATTGAACAAATCGGCGGTGAAGAGGAAGGACATGATGGATGCTCTGATTGATGTTGAAGATGAAAATGGCAGAAAATTGACCGACGAGGAGATCATTGATATTCTGGTGATGTACTTGAATGCAGGCCATGAATCTTCAGGCCATACGATGATGTGGGCAACTATTTTGTTGAATCAACACCCAGAAGTTCTCAAGAAAGCCAAGGCAGAACAAGAGGAGATTGTGAGGAGAAGGCCTCCAGGTCAAAAGGGACTGACATTGAAAGAATGCCGGGAAATGGAATATCTCTCAAAAGTGGTCGACGAGACTCTTCGCTATGTATCATTCTCCCTTGTTGTTTTCAGAGAGGCACAAATGGATGTCAACCTCAATGGTTATCTAATTCCCAAGGGTTGGAAAGTGCTGGCTTGGTTCAGAAGCATTCACTACGACAGTGAAGTTTACCCAGATCCAAAGAAGTTCGATCCTTCGAGATGGGATGGATTTATACCAAAAGCAGGAGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTGTGTCCAGGAAATGATCTAGCCAAATTGGAGATCTCCATTTTCGTCCACCATTTTCTTCTCAATTACAAGCTTGAATGGCTGACTCCTGACTGTCCAATCTTGTATCTGCCCCATTCGAGGCCAAAGGACAACTGCATTGCGAAAATCAGTAAGAAATAG | 1473 | 48.2 | MEASWVLAAAVTAAAAVAGLTVVKWAAKSLNEWIYEAKLGDRRMALPPGDLGWPLIGNMLAFFRAFKSKNPETFIDSYVSRFGKIGVYKVHLFGNPSVVVTTPETCRKVLTDDEAFQPGWPRAAIELIGKKSFIEMPVEEHKRLRRLTAAPVNGFEALSNYIPYIEENVLKSLEKWSNMGPIEFLTQLRKLTFTIIMYIFLSTESESVMESLEKEYTRLNYGVRALRINLPGFAYHKALKARKNLVAALQGIVTDRRNRRLNKSAVKRKDMMDALIDVEDENGRKLTDEEIIDILVMYLNAGHESSGHTMMWATILLNQHPEVLKKAKAEQEEIVRRRPPGQKGLTLKECREMEYLSKVVDETLRYVSFSLVVFREAQMDVNLNGYLIPKGWKVLAWFRSIHYDSEVYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEISIFVHHFLLNYKLEWLTPDCPILYLPHSRPKDNCIAKISKK | 490 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 2868507 | 2873181 | - | Lag0020890.1 | Lac7g0373 | 613274 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac7g0373 | 490 | CDD | CYP90-like | 79 | 489 | - | - | |
| Lac7g0373 | 490 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac7g0373 | 490 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | FunFam | Ent-kaurenoic acid oxidase | 37 | 490 | - | - | |
| Lac7g0373 | 490 | SUPERFAMILY | Cytochrome P450 | 42 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | PANTHER | CYTOCHROME P450 26 | 45 | 465 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| Lac7g0373 | 490 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | PRINTS | P450 superfamily signature | 439 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | Pfam | Cytochrome P450 | 47 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g0373 | 490 | Gene3D | Cytochrome P450 | 37 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g2388 | Lac-Chr11:40069601 | Lac7g0373 | Lac-Chr7:2868507 | 1.30E-130 | dispersed | |
| Lac5g0281 | Lac-Chr5:2776581 | Lac7g0373 | Lac-Chr7:2868507 | 4.50E-131 | dispersed | |
| Lac5g0282 | Lac-Chr5:2787529 | Lac7g0373 | Lac-Chr7:2868507 | 1.10E-119 | dispersed | |
| Lac5g0283 | Lac-Chr5:2820251 | Lac7g0373 | Lac-Chr7:2868507 | 2.30E-34 | dispersed | |
| Lac5g0286 | Lac-Chr5:2862318 | Lac7g0373 | Lac-Chr7:2868507 | 8.20E-53 | dispersed | |
| Lac5g0287 | Lac-Chr5:2865541 | Lac7g0373 | Lac-Chr7:2868507 | 1.60E-73 | dispersed | |
| Lac6g0318 | Lac-Chr6:2614235 | Lac7g0373 | Lac-Chr7:2868507 | 5.40E-73 | dispersed | |
| Lac7g0373 | Lac-Chr7:2868507 | Lac7g2750 | Lac-Chr7:46655566 | 1.10E-63 | dispersed | |
| Lac12g1951 | Lac-Chr12:36340141 | Lac7g0373 | Lac-Chr7:2868507 | 2.20E-18 | transposed | |
| Lac11g2385 | Lac-Chr11:40050374 | Lac7g0373 | Lac-Chr7:2868507 | 2.40E-09 | wgd | |
| Lac12g1950 | Lac-Chr12:36326893 | Lac7g0373 | Lac-Chr7:2868507 | 2.70E-180 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac7g0373 | K04123 | - | csv:101221667 | 911.368 |