Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0388 ATGCCTCCAAGGAAGAAGCCTAATTCTTCGTCCAAGAAGCTCAATTCCAATCAGCAATCGCAGCCTTCCAAGTTCGGCATCCAACACTTCTTCGAGCGCCACTCTCAAAATGTTGCGCACTCTCAGAAGCTCACTCCACGAACTTCCGATTCAAAGACTGATGTTTCTATTTCTAACTCTTTGAATCGTGGAGATGATCGGAATGTGGAACGGCCAGATTCTAAGGAAGCGGTTGCGGCGGCGGCGATGGCGATGGCGACGGCTCAGAAGCCAGAGTTGCGGTTGCTTCCTGTGAGTGATGCGGTTTTGGCCTCTGAAAACCCTAAGTTGCCGCAGGGGAATGATGCTAGCAGTTCGTCTCTGAATACGACGCCTGAGAATTTGATTGCAGGTGTTGGAAATCCTGGTGATGACCATTCTAACGAGCTGTCTCCAGAATTTTCCAAGTCCGTGTCCCTGAAGCGCTTCAAGTTCTCTCCCGGAATGCTGATTAAGCAAAGTCAGGAAGAGGGGACTACAAATGATGAGATCACATGGAAGATATCTCCAGTAAACGAAAGGCTTCAGGCTGTTTCGAAGCAATTGCCGGAAACTATAAGAGTTTTGGCGAACTCCTCAAGGCTCAGCTCTTTGAGAATCCGACAGTGCTCACGAAATAAGACTTCCCCTGTCCAGCCTGGGAGTTTTGAGCAGTTGAGTTCACCGAACCTGAAACCTTCTGAAGGATCGGTGGCTTCGTTAAATAAGACTGGATTGAAAAGGTTAAATCCTAAACATGATATGGAACCTAATGGAGTTGCGATTGATAGTTTGAATGGCTCTAGAGTACCTAACAGTCAGAGTCCATTTCGGACGCCCCCATCTTTGTCATACTGCGATAAGATTGCCAATGATGCTGCATCTGCGTGTAATGAAGCACCTGATCACCCTATTTTAAGACCACACAAGAAGGCATTGCTTGAGCTTTTAGATCAGGTAGAAGATGTCATTTCTGTTGATAATGTCCCTTCTCCCATTGACTTGGAGGAGGATTCATCTGAATTACGAGGTAGGAATGGTAACAAGTTGACGACCAAAGTTGATTCAGCTGCAATGCAAATTCCTAAAAAGATTCCAGACACAGTGATGAAGGCATCCCCTTGTGATTTTCTTGTCTTGGAGGTAACTGAGAAATGTGAGCTAGCTGATACATCTGGTGTGAAACGCTCATATAAGGTTCTTCGCTTGCTAAATGAGCAAAGTGAAGAAGAGCGGGTGGTATACCTTTGGGAAGACTGGTTTGACAGTATTATTGCACCTGGAGATACTGTGAATGTTATCGGTGAATTTGATGACCAAGGAAGATGTCATATAGACCACGACAATAATTTTGTTATCCTACACCCCGATATACTTGTCTCTGGAACTCGGGTTGCTGGTCATTTGACCTGTCCAAGGAGGAGTGTTCTTGATGAGAGGTTGAAAAGTAACGAACAGTCAATTTCAGCATTAATTGGTACTTTGCTGCACCAAGTTTTTCAGGCTGGTCTTATGGAAGAGACACCAACTATCGCCTTTTTGGAAGAAGTTTCGAGAATGGTGCTTCAGAAAAGTATGGAAAATGTATATGCATGCGGAGCAAATGAAAAGGATATACGCAAAACTATGAATGAGGCAATTCCAAAAATTTTGCATTGGATCACCCTCTTCAAAGGCCCAATGGGTTTTAAAGCACCTACTATTGAGTTTAGATCTGATGATGGTCCCAGGAAAGTTAGTATATCAGAGGTAATTGATATTGAGGAGATGGCATGGGCTCCAAAATATGGTTTGAAAGGAATTATTGATGCTTCTGTCAGGGTAAACGTAATGTCAGATTATAATAAATGTGCCGAGAATGTCATGCCTTTAGAGTTTAAAACTGGAAAGTTGCCAGCTGGCCAGTCCTCCATGGAACATCGTGCCCAAGTGATCTTGTACACACTACTTATGTCCGAGAGGTACCAGAAACATGTTGATTATGGTCTCCTTTACTATCTCCGGTCGGATCAGACTCAGGGAATCTGGGTTCAAAGATCTGACTTGGTGGGGTTAATCATGCGTCGCAATGAACTTGCAAATAACATCCTCAAGGCATCAACCGCACAACTACTCCCCCCAATGTTACAGATTCCAAGTGTGTGCAAAGGATGTCGCCATCTTGATGTTTGTACTGTCTATCATAAGATGCAAAATGGAAGCAAAGAGAGTAGCGGGCTTGGAGTTTTATTTGACACCCATACAGATCATTTGAAAGCTTCGCATGGTATTTTCCTTCAGCATTGGGAAAGACTGGTTGATTTAGAGGCCAAGGAGACGGAGCTTGTAAAGAGGGGAGTTTGGCACTCACATACTGCGGAGAAAAATCAAACATCTACTTGTCTTTCTTCTATTGTTCTTAGTACGTTGGATGACCAACCACATTGTACTTTTGAAAAGGACCACAGAATCAACTATCGCTTTGTGCGTCAAGATTTGTCTTCTCAGAGTTTGAAAGATTCAAATGACGATAGTTCAAGCGCTGCTTCAATAAATGAAATGGACAGTTCACTTAGAGTTGGGGACTATGTGATACTTAGTACAGATTCTGGGAATTTGACCTTAGCAAGTGGGATTATAACAGATCTGAGCAATCTCCATATTTGTGTTTCTTTTTCTAAGCGCCTACGTTTGCCTGGAAGCACTTCTTCTACAGAGGCACATGATCTTGTGAAGCAGGTTTGGCGGATTGACAAGGATGAATTTATGACTTCTTTTGCCGTCATGAGGTTTAATCTTGTACAACTGTTTCTGCAAGGTGAACAAAACGGCCATCTTAGAAAGTTGATCGTAGATCTTGTGGCTCCAAGATTTGACGGTGGATGCATATTCAGCCAGGATCCAGCAATATCTTACATTTGGTCAGAGAAGAATTTAAATGATGACCAACGTCGAGCCATAATTAAGATACTTACAGCAAAGGATTATGCTCTGATTCTAGGAATGCCTGGAACAGGCAAGACATCCACGATGGTTCATGCTGTGAAGGCATTGTTGATGAGAGGTGTATCCATTTTGCTCACGTCTTACACAAACACTGCTGTTGATAATTTACTTATCAAACTGAAATCTCAGAACATTGATTTTATAAGGATTGGAAGAATTAATGCAGTGCATGAAGACATTCGCAGCCATTGCTTCTCGGAGTTGAACATACAAAGTGTGGAAGACATCAGAATGAGATTGGACCAGGTCAAAGTTGTAGCAGTTACTTGTTTGGGGATAACTAGTCCCTTACTCGTCAATAAAAAATTTGATATATGCATAATGGATGAAGCTGGACAAATCACCCTTCCAGTTTCCCTTGGGCCTTTGATGTTTGCTTCAACATTCGTCCTTGTTGGTGATCACTATCAACTACCTCCTCTTGTTCAGAGTACAGAGGCTCGAGAAAATGGACTGGGGATAAGCTTGTTTTGTAGGCTTTCAGAAGCACATCCTCAAGCAATTTCCGCATTACAAAGCCAGTATCGCATGTGCCGAGACATTATGGAATTATCGAATGCCTTGATATATGGAGACAGACTGCGTTGTGGCTCTAAAGAAACAGCGAACGCAAAGCTTGAATTTTCAAGTTTAAAGTTATCTTCATCTTGGCTCAAGGAGGTTCTAAACCCATGCAAACCAGTTATCTTTCTTTGTACAGATTTATTACCTGCTTACGAGACGAGAGATCACAAGATTGTGAACAACCCAATTGAAGCTAACATATTATCAGAGGTCACGAAGGGATTGCTTGATGGTGGGATTGAAGGGAATGACGTTGGGATTATCACTCCGTATAACTCCCAGGCAAGCATCCTTCGTCTAGCTATCAAGATAGCCTCTGTGGAGATACATACCATTGACAAATACCAGGGAAGAGATAAGGACTGCATATTGGTGTCCTTTGTTAGGTCCAGTGAAAATCCGAAGAGCTGTACTACCTCACTTCTTGGAGACTGGCATAGAATTAATGTGGCCATTACACGTGCCAAGAAAAAGCTAATCATGGTGGGATCACGCAAAACACTATCAAAAGTTCCACTGCTGAAGCTTCTAATCAAGAAGGTTGAAGAACAAACAGGCATCTTGAGTGTAACACGGAACGATATACAACAAAGTAGCAAGCTTCGTGGTTGCACATAG 4185 42.77 MPPRKKPNSSSKKLNSNQQSQPSKFGIQHFFERHSQNVAHSQKLTPRTSDSKTDVSISNSLNRGDDRNVERPDSKEAVAAAAMAMATAQKPELRLLPVSDAVLASENPKLPQGNDASSSSLNTTPENLIAGVGNPGDDHSNELSPEFSKSVSLKRFKFSPGMLIKQSQEEGTTNDEITWKISPVNERLQAVSKQLPETIRVLANSSRLSSLRIRQCSRNKTSPVQPGSFEQLSSPNLKPSEGSVASLNKTGLKRLNPKHDMEPNGVAIDSLNGSRVPNSQSPFRTPPSLSYCDKIANDAASACNEAPDHPILRPHKKALLELLDQVEDVISVDNVPSPIDLEEDSSELRGRNGNKLTTKVDSAAMQIPKKIPDTVMKASPCDFLVLEVTEKCELADTSGVKRSYKVLRLLNEQSEEERVVYLWEDWFDSIIAPGDTVNVIGEFDDQGRCHIDHDNNFVILHPDILVSGTRVAGHLTCPRRSVLDERLKSNEQSISALIGTLLHQVFQAGLMEETPTIAFLEEVSRMVLQKSMENVYACGANEKDIRKTMNEAIPKILHWITLFKGPMGFKAPTIEFRSDDGPRKVSISEVIDIEEMAWAPKYGLKGIIDASVRVNVMSDYNKCAENVMPLEFKTGKLPAGQSSMEHRAQVILYTLLMSERYQKHVDYGLLYYLRSDQTQGIWVQRSDLVGLIMRRNELANNILKASTAQLLPPMLQIPSVCKGCRHLDVCTVYHKMQNGSKESSGLGVLFDTHTDHLKASHGIFLQHWERLVDLEAKETELVKRGVWHSHTAEKNQTSTCLSSIVLSTLDDQPHCTFEKDHRINYRFVRQDLSSQSLKDSNDDSSSAASINEMDSSLRVGDYVILSTDSGNLTLASGIITDLSNLHICVSFSKRLRLPGSTSSTEAHDLVKQVWRIDKDEFMTSFAVMRFNLVQLFLQGEQNGHLRKLIVDLVAPRFDGGCIFSQDPAISYIWSEKNLNDDQRRAIIKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGVSILLTSYTNTAVDNLLIKLKSQNIDFIRIGRINAVHEDIRSHCFSELNIQSVEDIRMRLDQVKVVAVTCLGITSPLLVNKKFDICIMDEAGQITLPVSLGPLMFASTFVLVGDHYQLPPLVQSTEARENGLGISLFCRLSEAHPQAISALQSQYRMCRDIMELSNALIYGDRLRCGSKETANAKLEFSSLKLSSSWLKEVLNPCKPVIFLCTDLLPAYETRDHKIVNNPIEANILSEVTKGLLDGGIEGNDVGIITPYNSQASILRLAIKIASVEIHTIDKYQGRDKDCILVSFVRSSENPKSCTTSLLGDWHRINVAITRAKKKLIMVGSRKTLSKVPLLKLLIKKVEEQTGILSVTRNDIQQSSKLRGCT 1394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3023561 3038061 - Lag0020905.1 Lac7g0388 613289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0388 1394 CDD DEXXQc_DNA2 977 1177 IPR026851 GO:0017116(InterPro)
Lac7g0388 1394 MobiDBLite consensus disorder prediction 106 126 - -
Lac7g0388 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 976 1363 IPR027417 -
Lac7g0388 1394 Gene3D - 467 731 IPR011604 -
Lac7g0388 1394 MobiDBLite consensus disorder prediction 1 83 - -
Lac7g0388 1394 FunFam DNA replication helicase Dna2 912 1175 - -
Lac7g0388 1394 Pfam DNA replication factor Dna2 412 614 IPR014808 -
Lac7g0388 1394 Gene3D - 1176 1391 IPR027417 -
Lac7g0388 1394 PANTHER DNA2/NAM7 HELICASE FAMILY 210 1369 IPR045055 GO:0005737(PANTHER)|GO:0017108(PANTHER)|GO:0071932(PANTHER)
Lac7g0388 1394 MobiDBLite consensus disorder prediction 215 244 - -
Lac7g0388 1394 FunFam DNA replication helicase Dna2 577 731 - -
Lac7g0388 1394 Pfam AAA domain 1154 1354 IPR041679 -
Lac7g0388 1394 MobiDBLite consensus disorder prediction 34 63 - -
Lac7g0388 1394 FunFam DNA replication helicase 1176 1389 - -
Lac7g0388 1394 CDD DNA2_N-like 467 702 - -
Lac7g0388 1394 MobiDBLite consensus disorder prediction 8 26 - -
Lac7g0388 1394 MobiDBLite consensus disorder prediction 110 126 - -
Lac7g0388 1394 Gene3D - 922 1175 IPR027417 -
Lac7g0388 1394 CDD SF1_C_Upf1 1178 1371 IPR047187 -
Lac7g0388 1394 Pfam AAA domain 1077 1145 IPR041677 GO:0004386(InterPro)
Lac7g0388 1394 Pfam AAA domain 977 1069 IPR041677 GO:0004386(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g0928 Lac-Chr1:24350571 Lac7g0388 Lac-Chr7:3023561 9.60E-15 dispersed
Lac5g0306 Lac-Chr5:3071834 Lac7g0388 Lac-Chr7:3023561 6.20E-31 dispersed
Lac7g0388 Lac-Chr7:3023561 Lac7g0436 Lac-Chr7:3355091 4.60E-27 dispersed
Lac7g0388 Lac-Chr7:3023561 Lac13g1696 Lac-Chr13:18900194 9.50E-17 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0388 K10742 - csv:101220726 2375.51