Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0417 ATGTCTCTCAATCAATCAAGGCATGATAGGAACGAGGATCCTCAGCTTAAGAAATCAGCGCGGTCGTCGAGCTTGAAATACCAGAAAATCTCTTACGGACTTCATTCTAAGCCGGGCGATTCCGGCTGGTTTGCGCCGCCTATCGTCTCCAGCAATAGTTTTAAGCAGTCCAACGGCGCACAACACGCACGGAAATCTAGGGCTGATGTATCGTCTGTAAATTCTACCGTTTCGACTAACCCTCGCGGAGGACAAAACGGTTCTCATGTGCAGCAGCAACAGAATGGTTCATCATCCAGTCCAATTAAATTGTCAGGATCCCAGAACGGGATTATTGAAAAAACTGCAACTTCTCAAACGACCTCAAAGACTTCTGTTGCATTTTCAGAATGCAAGGGCGGGATTGTTCAAAATAATGCAACCTCTAAACCTACCTCAAAAACTTCTGACACCAATATATCCTCAACCCCCTTTAAAGACTTGGGAGAACAGCATAAAATATTTCCACTTCAATTTGGATCACTAGACCCTGGTTTCCAGATTCCTTGGACCAGCTCAGCTCCTTCGAATCTGGAAGGACAGATATTGACCCAGGCACAATGCCATTTGTTCAAGTCTGTACCTTCAGGGTCTGTGCCCAGGCAACCAATGGCAAAAAATGATTCCAGCGTCTGTGATCAACCAAATATGGGAAAGTTCAATTCAGAGTCTGAGATCAAAAGGGAGACGCAAGTCTCAGCGGGAGCACCCTTAAACCAGAATCAGAATCCTTCCCATGTATCATTCATTAGTCACAGAGCTTCTGTTTCCCTCCCCGATAGTAAGAGTACGAGCCTGGCGCATCATGTTGCCAATTCACCTAATATGAACGAAGTCCAAGTTCATGACGCGATCTCTGCTTCCTCAGCAGCGAAGCATGTAGCAATTCAGTCTCCTCCTGGGTCTTTGACGCAGGTCTCTTTTCATACGAGTCAAGATCTTGCTTTTCAAACTCGTACTAGTTATCCAGATGGCGAAGTTTCTGAAACCGTACAAGCTTCAGAATCAAATGCTGCAGAGAGAGGAAGCTCATCTACTTCAAATGAAGTCGGTGTTGAGGTTTCAGATCCCATTTGTTATTCTAAGCTGGAATCCTCTTTGCAAATTGAGCAATCAAAACATGAGCTTGTAGGAGCGAAAAGATTGCTCGTTTCTAGAGATGACATGGAACAAAGTAAACCTCCATCTCCATCTTGTATGAAGTCGATATCAATTAATAATGGCAATTCAAACTCCAAAACACTCGAGGAATGGGATGAACCTGTAAGCTCTCATGCAGAAGTTGACAGTACAAAAGACAATAACGTTCTTTCCAACTCCATAACTCATGGATATAAGACTTCACTTGTTATTGCATCTTCTTGTCGAAGCAATAGTAACAATAATACTGAAGTGAGCCGAGCTGATCTGCAGTCAGCTTCTGGTCAGACATCTGAGTTCTCAGAGATGAAGCATGAAGGGGATAGATTAGCGCACGCAGGTTTTCAGTGTGACCCTATTCTTATACCATTTGTCGAGGATAAACCTGTTATGGACATAAACAAGATGAGAAATACTTCTTCAAGAGGGAAGAATAAGAGAAAGGAAATTCTTCAGAAGGCAGACGCTGCTGGGACTAATTCTGACCTTTATATGGCATACAAAGAACCTGAAGTAAAGAAAGAGACTGTCTTGTCTGCGGAAAGCTTCAATGGGAGCTTAAATATGAAACACGAGTCTGCTGGTTCCATCATGGAAGAGGCTGTCTTGACCAAGAAGGAAATTCAGGGTAAACTCGTGCTAGATGATTGGGAAGATGCAACCGATATTTCTACTGTTAAATTGAAATACGAGGGTTTTGAGGACAAGGCCAAAGCAAAAGTAGCACTAGACCACGAGGTCGGGAGTGGAGATCTGGCCAAAAAGTACTCCAGAGATTTCCTCCTTAAATTTGCAGAGCAGTTCATGGACCTTCCCGATGGGTTTGAAATTACTCCCGGCATAAAGGGTCTAATGAGTATTAACCATGGCTCTCATTCGATTAATAATAATTCACCTTTGAATCTTGAAAAGCCAAGGGGAGGGTCTCGACGAGACCATCGTGCTATTACTGTTGATGACAAACTGTTTGCTTCAGGGCGGGATTCACACCTGGATAGCACTCGACCTACCCAAGGTCTTAACAATGGTGCTTTAAAGAACCCAAGGGCACACGTAGGTTCTCAGGGAAAGATTCAAAGAAATGGCTCCAATTCTGATAGATGGCAAAGAGATACTAATTTTCAGCTGAAAGGTTTAATTTCTCCTCCAACTCCATTACAGATGATGCACAGAGCGGAGAAGAAGTATGAAGTGGGTAAAGCGGCCGACGAGGAAGAGACCAAACAAAGGCAGCTGAAGGCTATACTGAACAAGCTAACTCCACAAAATTTTGAAAAACTCTTTGAACAAGTGAAGGCAGTTAATATTGATAGTTCTAAGACACTAACTGGTGTCATCTCGCAGATCTTTGACAAAGCTTTGATGGAGCCTACTTTCTGTGAAATGTATGCCAATTTTTGTCTCCATCTGGCTGGCGAGTTACCTGATTTTAGCGATGATAACCAGAAGATTACTTTTAAGAGGTTGCTTTTGAACAAGTGCCAGGAGGAATTTGAGAGAGAGCAGGAAGAAAATGATGAAGTCAATAAGGTCAGTGAGATGAAACCTTCTGCAGAGGAACGAGAAGCGAAGAGAATACAGGCACGCAAAAGAATGCTAGGCAACATCAGATTAATTGGGGAACTTTACAAAAAAAAGATGATAACAGAGAAAATCATGCATGTATGCATCAAGAAGTTGTTGGGTCAATATCAAAATCCTGACGAGGAAGATATTGAAGCATTGTGCAAATTGATGAGCACCATAGGAGAGATGATAGATCACCCCAAAGCTAAGGAGCACATGGATGCATACTTTGAGATGATGACTAAATTATCTAACAACATGAAGCTGTCATCCAGGGTTAGATTCATGTTGAAGGATGCAATTGATTTGAGAAAGAATAAATGGCAACAGAGGAGAAAAGTCGAAGGGCCCAAAAAAATTGATGAAGTGCATAGGGATGCTGTGCAAGAACGTCAAGCACAAGCTAGTAGATTAGGCCGTGGTCCTGGAAGCCAGGCACAATTGAGGAGAGGAACATCCATGGATTTTGGTTCTCGATCGTCTGCATTATTGCCTTCTCCTAATGCCCAGGTTGGTGGTTTTCTCGGTTTTCCAACCCAGGTTTGTGGTTCAACCAGTCAGGACGCTCGTTTTGAAGGTAAACAACAGTCTTGGGAGGCCAAGGCAAGCCCAAGTCTATTGCCCCAAAGACCTATTAGTGATGATTCCATCACTTTGGGCCCCCAGGGTAGTTTAGCTAGAGGAATGTCCATTAGAGGGCCACGATCCATTTCATCCGCTTCATTAGCAGATTCATCCTTACCAATTGGTAATAACTCCCAAAGAATGACGGCTGTTTTAAGTTCTCATGGCTCAGTATCAGAGCATGCAACTTCCAACTCCCGAGGGGACATCAATTCAAGAAATTTGTCAAAGGGATATGTCGGTTCAGTATCTCTGGATCAAGCGACGCGTACACCGGAACATGGTATTACTAATGGACAGCCAGCTTTGACACCGAATGGTCATTCTGAAGCCATGTCCAAAGAACTCCTACGAGATAAGTCCATAGCAGCGATTCGGGAATATTACAGTGCTCGAGATGAGAAGGAAGTAACTTTGTGCATCAAGGACTTGAATTCACCTGGATTCCATTCATCCATGATTTCTCTTTGGATCACAGACTCATTTGAGAGAGAAAACATAGAAAGGGATCTTTTGGCTAAACTTCTTGTTAGCCTCGCCAAATCGAAGGATGGTACATTGACTCAAGTCCAACTTGTCAAAGGAATCCAAAGTGTTCTGGCGACTATGGAGGATGCTGTGAACGATGCCCCAAAAGCTCCAGAATTTATGGGGCGATTACTCGCAAACTTGATCTGTGAAAACTTGATTTCATTGAAAGAAATGGGCAAGTTTATATATGAAGGTGGAGAGGAGCCTGGAAGTCTTGTACAAGCTGGGCTTGCTGCTGATGTTCTTGGTAACGTGCTGGAGGCAGTTCAATTGGAGAAAGGTCAGATTTTTCTCAACGAAATTCTTAAAACTTCTAATCTACAATTGGAAAGATTTCGCCCTTCATTCCCAATCAAATCAACAAAGTTAGAGAAATTTATTTAG 4284 43.0 MSLNQSRHDRNEDPQLKKSARSSSLKYQKISYGLHSKPGDSGWFAPPIVSSNSFKQSNGAQHARKSRADVSSVNSTVSTNPRGGQNGSHVQQQQNGSSSSPIKLSGSQNGIIEKTATSQTTSKTSVAFSECKGGIVQNNATSKPTSKTSDTNISSTPFKDLGEQHKIFPLQFGSLDPGFQIPWTSSAPSNLEGQILTQAQCHLFKSVPSGSVPRQPMAKNDSSVCDQPNMGKFNSESEIKRETQVSAGAPLNQNQNPSHVSFISHRASVSLPDSKSTSLAHHVANSPNMNEVQVHDAISASSAAKHVAIQSPPGSLTQVSFHTSQDLAFQTRTSYPDGEVSETVQASESNAAERGSSSTSNEVGVEVSDPICYSKLESSLQIEQSKHELVGAKRLLVSRDDMEQSKPPSPSCMKSISINNGNSNSKTLEEWDEPVSSHAEVDSTKDNNVLSNSITHGYKTSLVIASSCRSNSNNNTEVSRADLQSASGQTSEFSEMKHEGDRLAHAGFQCDPILIPFVEDKPVMDINKMRNTSSRGKNKRKEILQKADAAGTNSDLYMAYKEPEVKKETVLSAESFNGSLNMKHESAGSIMEEAVLTKKEIQGKLVLDDWEDATDISTVKLKYEGFEDKAKAKVALDHEVGSGDLAKKYSRDFLLKFAEQFMDLPDGFEITPGIKGLMSINHGSHSINNNSPLNLEKPRGGSRRDHRAITVDDKLFASGRDSHLDSTRPTQGLNNGALKNPRAHVGSQGKIQRNGSNSDRWQRDTNFQLKGLISPPTPLQMMHRAEKKYEVGKAADEEETKQRQLKAILNKLTPQNFEKLFEQVKAVNIDSSKTLTGVISQIFDKALMEPTFCEMYANFCLHLAGELPDFSDDNQKITFKRLLLNKCQEEFEREQEENDEVNKVSEMKPSAEEREAKRIQARKRMLGNIRLIGELYKKKMITEKIMHVCIKKLLGQYQNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFEMMTKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIDEVHRDAVQERQAQASRLGRGPGSQAQLRRGTSMDFGSRSSALLPSPNAQVGGFLGFPTQVCGSTSQDARFEGKQQSWEAKASPSLLPQRPISDDSITLGPQGSLARGMSIRGPRSISSASLADSSLPIGNNSQRMTAVLSSHGSVSEHATSNSRGDINSRNLSKGYVGSVSLDQATRTPEHGITNGQPALTPNGHSEAMSKELLRDKSIAAIREYYSARDEKEVTLCIKDLNSPGFHSSMISLWITDSFERENIERDLLAKLLVSLAKSKDGTLTQVQLVKGIQSVLATMEDAVNDAPKAPEFMGRLLANLICENLISLKEMGKFIYEGGEEPGSLVQAGLAADVLGNVLEAVQLEKGQIFLNEILKTSNLQLERFRPSFPIKSTKLEKFI 1427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3244527 3251026 + Lag0020934.1 Lac7g0417 613318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0417 1427 MobiDBLite consensus disorder prediction 698 721 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 210 230 - -
Lac7g0417 1427 ProSiteProfiles MI domain profile. 1239 1363 IPR003891 -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 337 364 - -
Lac7g0417 1427 Pfam MA3 domain 1241 1352 IPR003891 -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 136 159 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 401 428 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 1 19 - -
Lac7g0417 1427 SUPERFAMILY ARM repeat 795 1024 IPR016024 -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 686 762 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 1053 1073 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 404 428 - -
Lac7g0417 1427 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 363 1415 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Lac7g0417 1427 MobiDBLite consensus disorder prediction 1173 1198 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 1100 1157 - -
Lac7g0417 1427 Gene3D - 802 1035 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 723 737 - -
Lac7g0417 1427 SMART if4_15 802 1022 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Lac7g0417 1427 MobiDBLite consensus disorder prediction 213 230 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 46 106 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 747 762 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 1 106 - -
Lac7g0417 1427 SMART ma3_7 1240 1354 IPR003891 -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 894 915 - -
Lac7g0417 1427 Pfam MIF4G domain 803 1022 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Lac7g0417 1427 SUPERFAMILY ARM repeat 1234 1417 IPR016024 -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 1045 1073 - -
Lac7g0417 1427 MobiDBLite consensus disorder prediction 1100 1135 - -
Lac7g0417 1427 Gene3D - 1231 1427 - -
Lac7g0417 1427 FunFam Eukaryotic translation initiation factor 4G 802 1035 - -
Lac7g0417 1427 Coils Coil 884 904 - -
Lac7g0417 1427 FunFam Eukaryotic translation initiation factor 4G 1233 1426 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0531 Lac-Chr2:3970705 Lac7g0417 Lac-Chr7:3244527 8.30E-55 dispersed
Lac3g0227 Lac-Chr3:1594054 Lac7g0417 Lac-Chr7:3244527 9.70E-58 dispersed
Lac12g1976 Lac-Chr12:36659710 Lac7g0417 Lac-Chr7:3244527 1.20E-261 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0417 K03260 - csv:101222372 1862.81