Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0465 | ATGGGTAGCGGAGAAAAGGTCTTCACCTTGAAGGAAGTCGCCGAGCACAACAATCACAAGGACTGCTGGCTCGTCATCAGTGGAAAGGTATATGATGTGACCAAATTCTTAGAAGACCATCCTGGTGGTGATGATGTTTTGTTATCAGCTACAGGAAAAGATGCAACCGACGATTTCGAAGACGTTGGGCACAGTGACAATGCAAGAGAAATGATGGAGCAATACTATGTTGGGGAGATTGATGCTTCAACAATTCCGAAGAAGGTCGCATACACACCTCCAAAACAGCCTCATTACAATCAGGACAAGACATCCGAGTTCATCATCAAGCTTCTCCAATTCCTCGTTCCGCTTGCGATTTTGGGATTGGCAGTCGCAATACGCTTCTACACCAAACAAGCTTGA | 405 | 45.68 | MGSGEKVFTLKEVAEHNNHKDCWLVISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMEQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA | 134 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3688907 | 3691008 | + | Lag0020982.1 | Lac7g0465 | 613366 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0465 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
Lac7g0465 | 134 | Gene3D | - | 2 | 86 | IPR036400 | - | |
Lac7g0465 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 6 | 90 | IPR036400 | - | |
Lac7g0465 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Lac7g0465 | 134 | FunFam | Cytochrome b5 type B | 3 | 85 | - | - | |
Lac7g0465 | 134 | PANTHER | CYTOCHROME B5 | 5 | 131 | IPR050668 | GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Lac7g0465 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 80 | IPR001199 | - | |
Lac7g0465 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Lac7g0465 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Lac7g0465 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Lac7g0465 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Lac7g0465 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac6g0805 | Lac-Chr6:6905129 | Lac7g0465 | Lac-Chr7:3688907 | 2.30E-26 | dispersed | |
Lac12g1295 | Lac-Chr12:19369129 | Lac7g0465 | Lac-Chr7:3688907 | 6.00E-30 | transposed | |
Lac4g0070 | Lac-Chr4:1259308 | Lac7g0465 | Lac-Chr7:3688907 | 3.70E-51 | transposed | |
Lac7g0103 | Lac-Chr7:870251 | Lac7g0465 | Lac-Chr7:3688907 | 4.30E-39 | transposed | |
Lac11g2510 | Lac-Chr11:41219714 | Lac7g0465 | Lac-Chr7:3688907 | 1.20E-45 | wgd | |
Lac12g2057 | Lac-Chr12:37681232 | Lac7g0465 | Lac-Chr7:3688907 | 6.30E-59 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g0465 | K23490 | - | csv:101214209 | 273.478 |