Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac7g0513 | ATGGCTGGTCAAGTAAACCTAGTGGTTGGATGTCTTGTTTGGATTGAGGATCCTGAGGTAGCCTGGATAGATGGGGAAGTAGTGGAAGTTAATGGCCAAGATATCAAAGTACTCTGTACAACAGGAAATACTGTTGAGGTCAAATCATCAAATGTCTATCCGAAGGATCCTGAATTTCCAGAATGTGGTGTGGATGATATGACAAAACTAGCTTACTTGCACGAGCCAGGACTTCTACTAAACTTAAAATCTCGTTATGATGTTAATGAAATTTATACATACACTGGAGGTATACTAATAGCTGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAGTGGCATAATGCAACAATATAAAGGTGCAGCTTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCGAATTCTGCTTATAGACAGATGATTAACGAGAGTATCAGCCAGTCAATTTTAGTTAGCGGGGAAAGTGGAGCTGGTAAAACGGAAAGTACAAAGATGCTTATGCGCTATCTTGCCCATGTTGGAGGGAGAGCTGGAGGGAAGGCTGCAACTGGTGAACGTTCTGTAGAGCAGCAAGTACTAGAGTCCAACCCTGTTCTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGATCAAAGTTGGAGAATTTCTGGAGCTGCCATCAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTCTCTGATCCTGAGAGGAATTATCATTGCTTTTATATGCTTTGTGCTGCACCACCAGAGGAAATTGAAAAGTATAAATTAGGGAATCCAAGAACATTTCATTATCTTAATCAAACTAATTGCTACGAACTTGATGGAGTGGATGATTCAAAGGAATACCTTTCTACTAGGGAAGCTATGGATGTTGTTGGAATAAGTACAGCTGAGCAGGATGCTATATTTCGAGTCGTAGCTGCAGTACTTCATTTGGGCAATGTTGAATTTGCAAAGGGGAAGGATGTGGATTCCTCCGAACCTAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACTAAATGTCTCGATCCAGACTCTGCAACTCTTAGTAGGGATGCTTTAGCCAAAATTGTTTATTCAAGATTATTTGATTGGATTGTTGATACGATTAATAACTCAATTGGCCAAGATCCTGGTTCAAAGCACTTAATTGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTCTGTATTAACCTGACAAATGAGAAATTGCAGCAACATTTCAACCAGCACGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAATTTATCGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGTGTCATTGCTCTTCTGGATGAGGCTTGCATGTTTCCGAGATCCACGCATGAAACTTTTGCACAGAAACTATATCAAACTTTTAGGGACCATAAGCGCTTTAGTAAGCCTAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGTGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGAGTGCTTCTAAGTGCACCTTTGTTTCAGGGCTCTTCCCCCCCTTACCTGAAGAAACCTCCAAATCATCCAAGTTTTCATCAATAGGGACTAGATTTAAGCAACAACTTCAATCTCTGCTCGAGACACTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAATCTTCTAAAACCATCCATCTTTGAGAATAATAATGTTTTACAGCAGCTCCGGTGTGGGGGAGTCATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCCACTAGGAAGACGTTTGATGAATTCATTGGTCGGTTTACTATCTTGGCACCTGATGTTTTGAAGGGGAGCTCTGATGAAGCAACTGCGTGTAAGAGGCTTTTGCAGAAAGTTAAACTTAAAGGATATCAGATTGGTAAAACCAAAGTGTTTCTCAGGGCTGGTCAAATGGCAGAATTAGATGCTTGCCGAACTGAGGTCTTGGGAAGATCTGCTAATGTTATCCAAAGGAGAGTTCGCTCATATTTGGCACGCAAACACTTTATTTTGTTGCGGTTGGCTGCTATACAAATTCAAGCCCTGTGTAGAGGGGAAGTTGCACGCCAGCAGTATGAAAACATCAGAAGGGAAGCTGGTTCTATCAAAATCCAAAAGTATTGGCGCATGTATTTTGCCCGAAGTTGCTATAAAAGATTGTGCTCTTCAGCTGTAGCTATTCAAGCTGGTATCTATGGTATGGTTGCTCGTAAAGAGCTTAAGTTCAGGAGGCAGACAAGAGCTGCAATTATCATTCAGAGTCGGTGTCGGCAATACTTTGCTCGTAAACATTATTTGAGTACAAAAATAGCTGCAATTACCACTCAATGTGCAATGAGAGGAAGAGTTGCACGCAGAGAACTCCAAAAGCTTAAAATGGCTGCTAAGGAAACTGGCGCTCTCCAAGCTGCCAAAAATTTGCTGGAGAAGCAAGTGGAAGAACTAACATGGAGGTTGCAGCTAGAGAACCGAATGAGGGCTGACATGGAGGAAGCCAAGACTCAAGAAAACACAAAATTGAAGTATGATTTGGAAGAAATGCGAACTCAATTTCAGGAAACGAAAGCACTGCTTATTGAGGAACGTGAAGCTGCAAAGAAAGCAGTTGAGGAATGTGAAGCTGCAAAGAAAGCACTTGAGGAATGTGAAGCTGCAAAGAAAGCTGTTGAGGAACGTGAAGCTGCAGAGAAAGCTGTTAAGGAACGTGAAGCTGCAGAGAAAGCAGTTAAGGAACGTGAAGCTGCAGAGAAAGCAGTTGAGGAACGTGAAGCTGCAGATGAGGAACGTGAAGCTGCAGAGAAAGCAGTTGAGGAACGTGAAGCTGCAGAGAAAGCAGTTGAGGAACGTGAAGCTGCAGAGAAAGCAGTTAAGGAACGTGAAGCTGCAGGGAAAGCCGTTGAGGAACGTGAAGCTGCAGGGAAAGCAGTTGAGGAACGTGAAGCTGCAGGGAAAGCAGTTGAGGAACGTGAAGCTGCAGAGAAAGCAGTTGAGGAACGTGAAGCTGCAGAGAAAGCAGTTGAGGAACGTGAAGCTGCAGAGAAAGCAGTCGAGGAACGTGAATCTGCAGAGAAAGCAGTCGAGGAACGTGAATCTGCAGAGAAAGGAGTCGAGGAACGTGAATCTGCAGAGAAAGTAGTCGAGGAACGTGAATCTGCAAAGAAAGTAGTTGAGGAACGTGAATCTGCAAAGAAAGTAGTTGAGGAACGTGAATCTGCAAAGAAAGTAGTTGAGAAAGTCCCAGTCATACAGGAGGTTCACGTTGTTGATCATGAGCTGATCAATAAGCTAAGTACTGAAAATGAAGAACTTAAGGCTCTTGTAAGTTCTTTGGAAAATAAAATTGATGAAACAGAAAAGAAATTCGAGGAAAGTAACAAACTTAGTGAAGAGCGCCTGAAGCAGGCTCTGGAGGCAGAGTCAAAGATAATAGAATTAAAGACTTCCATGCAAAGGCTTGAGGAAAAAATAGCTGACTTGGAAACTGAGGACCAAATTTTGAGGCAGCAAACACTGCTAAAGCCTCCTTCAAGAAAAATGTCTGGACAAATGTCTGGACGTATAACAATTGCACCCAATCAGCCTTCGGAAAATGGCTACCATGAATTACTAAGCCAGGCACCATCAAAAAAGTTTGGTACCGATGCTGATGCAAAATTGAGGAGATCCCAAATTGAAAGGCAGAACGAAGGCATGGATGCTCTATCGAAATACTTGACACAGGACCTTGGGTACAGTGAGGGAAAACCTGTTGCTGCTTTTGTAATTTATAAATCTCTTCTCCATTGGAAGTCATTTGAAGCAGAAAAAACAAGTGTTTTTGATCGGCTTATTCAGCTAATTGGTTCTGCTATTGAGAATCAGGATGATAATGAACATATGGCTTATTGGTTATCCAACACAACTACATTGTTGTTTCTTCTTCAAAAGAGTTTAAAAGCCACACCACGAAAGCCTCCCACCCCGACATCATTGTTTGAGCGAATGACCCAAGGGTTTCGTTCATCTTCTGCCAACCTTCCAGTTGGCACCCTTGATGTGGTGCGGCAAGTTGAGGCCAAATATCCTGCTCTACTTTTCAAGCAGCAGCTAACAGCGTATGTAGAAAAGATATATGCAATAGTTAGAGACAACCTAAAGAAGGAACTATCGCCGTTGCTTTCAACTTGTATCCAGGCTCCCAGATCTCCGAGAGGAAATATTTTAGAATCATCTGACCAGGAAAATAGTAGTAGCCCTCCCAGTAGTCCATGGAGCAGCATCATCGATAACCTTAATGATCATCTTTGTAGATTGCAGAAGAACTGTGTGCCTGCCGTTTTGGTCCAGAAGATATTCACTCAGGTTTTTTCATATGTCAACGTACAGCTTTTCAATAGTCTTCTACTTCGTCGAGAGTGCTGCACATTTAGCAACGGAGAATATGTGAAGTCAGGCCTGGCCGAATTAGAGATTTGGTGTGGCCAAGCAAAAGAAGAGTATGCTGGGTCGTCTTGGGATGAGCTAAAACCGGTGAGGCAAGCTGTTGGATTTTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGACCTCTGTCCAATATTGAGTGTGCAGCAGCTTTATAGAATATGTACTCTTTATTGCGACGAAAATTACAATACTACGAGCGTAGCTCCAGATGTTATTTCTAGCATGAAGGTTATGATGACCGAGGATTCCAATGATGAAGACAGTAGTTCCTTTTTGTTGGATGACAATTCCAGTATACCTTTCTCAGTTGAAGACATATCCACTTCCCTGCAAGAAAAGAATTTTCAAGATATAAAGCCTCCAGCAGAACTACTTGAGAATCCGGTCTTCCAATTTTTACAGGAATAA | 5139 | 41.78 | MAGQVNLVVGCLVWIEDPEVAWIDGEVVEVNGQDIKVLCTTGNTVEVKSSNVYPKDPEFPECGVDDMTKLAYLHEPGLLLNLKSRYDVNEIYTYTGGILIAVNPFRRLPHLYDSGIMQQYKGAALGELSPHPFAIANSAYRQMINESISQSILVSGESGAGKTESTKMLMRYLAHVGGRAGGKAATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEIEKYKLGNPRTFHYLNQTNCYELDGVDDSKEYLSTREAMDVVGISTAEQDAIFRVVAAVLHLGNVEFAKGKDVDSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDPDSATLSRDALAKIVYSRLFDWIVDTINNSIGQDPGSKHLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAQKLYQTFRDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCTFVSGLFPPLPEETSKSSKFSSIGTRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPSIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPDVLKGSSDEATACKRLLQKVKLKGYQIGKTKVFLRAGQMAELDACRTEVLGRSANVIQRRVRSYLARKHFILLRLAAIQIQALCRGEVARQQYENIRREAGSIKIQKYWRMYFARSCYKRLCSSAVAIQAGIYGMVARKELKFRRQTRAAIIIQSRCRQYFARKHYLSTKIAAITTQCAMRGRVARRELQKLKMAAKETGALQAAKNLLEKQVEELTWRLQLENRMRADMEEAKTQENTKLKYDLEEMRTQFQETKALLIEEREAAKKAVEECEAAKKALEECEAAKKAVEEREAAEKAVKEREAAEKAVKEREAAEKAVEEREAADEEREAAEKAVEEREAAEKAVEEREAAEKAVKEREAAGKAVEEREAAGKAVEEREAAGKAVEEREAAEKAVEEREAAEKAVEEREAAEKAVEERESAEKAVEERESAEKGVEERESAEKVVEERESAKKVVEERESAKKVVEERESAKKVVEKVPVIQEVHVVDHELINKLSTENEELKALVSSLENKIDETEKKFEESNKLSEERLKQALEAESKIIELKTSMQRLEEKIADLETEDQILRQQTLLKPPSRKMSGQMSGRITIAPNQPSENGYHELLSQAPSKKFGTDADAKLRRSQIERQNEGMDALSKYLTQDLGYSEGKPVAAFVIYKSLLHWKSFEAEKTSVFDRLIQLIGSAIENQDDNEHMAYWLSNTTTLLFLLQKSLKATPRKPPTPTSLFERMTQGFRSSSANLPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYAIVRDNLKKELSPLLSTCIQAPRSPRGNILESSDQENSSSPPSSPWSSIIDNLNDHLCRLQKNCVPAVLVQKIFTQVFSYVNVQLFNSLLLRRECCTFSNGEYVKSGLAELEIWCGQAKEEYAGSSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYCDENYNTTSVAPDVISSMKVMMTEDSNDEDSSSFLLDDNSSIPFSVEDISTSLQEKNFQDIKPPAELLENPVFQFLQE | 1712 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4083896 | 4102897 | - | Lag0021030.1 | Lac7g0513 | 613414 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac7g0513 | 1712 | PANTHER | MYOSIN | 1087 | 1657 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Lac7g0513 | 1712 | FunFam | unconventional myosin-Va | 837 | 885 | - | - | |
| Lac7g0513 | 1712 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 792 | 887 | IPR027417 | - | |
| Lac7g0513 | 1712 | Coils | Coil | 934 | 1052 | - | - | |
| Lac7g0513 | 1712 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | Gene3D | Kinesin motor domain | 65 | 666 | IPR036961 | - | |
| Lac7g0513 | 1712 | MobiDBLite | consensus disorder prediction | 996 | 1142 | - | - | |
| Lac7g0513 | 1712 | ProSiteProfiles | IQ motif profile. | 812 | 839 | - | - | |
| Lac7g0513 | 1712 | ProSiteProfiles | IQ motif profile. | 858 | 887 | - | - | |
| Lac7g0513 | 1712 | Coils | Coil | 1225 | 1259 | - | - | |
| Lac7g0513 | 1712 | ProSiteProfiles | IQ motif profile. | 787 | 816 | - | - | |
| Lac7g0513 | 1712 | CDD | MYSc_Myo11 | 76 | 724 | IPR036018 | - | |
| Lac7g0513 | 1712 | ProSiteProfiles | IQ motif profile. | 741 | 768 | - | - | |
| Lac7g0513 | 1712 | CDD | MyosinXI_CBD | 1315 | 1681 | IPR037975 | GO:0007015(InterPro) | |
| Lac7g0513 | 1712 | Pfam | Myosin head (motor domain) | 64 | 724 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | ProSiteProfiles | IQ motif profile. | 762 | 791 | - | - | |
| Lac7g0513 | 1712 | Gene3D | - | 256 | 314 | - | - | |
| Lac7g0513 | 1712 | FunFam | Myosin 2 | 316 | 433 | - | - | |
| Lac7g0513 | 1712 | ProSiteProfiles | IQ motif profile. | 835 | 864 | - | - | |
| Lac7g0513 | 1712 | SMART | MYSc_2a | 56 | 737 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | MobiDBLite | consensus disorder prediction | 1486 | 1506 | - | - | |
| Lac7g0513 | 1712 | FunFam | Myosin heavy chain | 256 | 311 | - | - | |
| Lac7g0513 | 1712 | FunFam | Class V myosin | 443 | 587 | - | - | |
| Lac7g0513 | 1712 | Gene3D | - | 671 | 734 | - | - | |
| Lac7g0513 | 1712 | Coils | Coil | 1183 | 1217 | - | - | |
| Lac7g0513 | 1712 | Gene3D | - | 790 | 836 | - | - | |
| Lac7g0513 | 1712 | Gene3D | - | 837 | 886 | - | - | |
| Lac7g0513 | 1712 | Gene3D | - | 739 | 789 | - | - | |
| Lac7g0513 | 1712 | ProSiteProfiles | Myosin motor domain profile. | 62 | 736 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | Pfam | IQ calmodulin-binding motif | 765 | 782 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | Pfam | IQ calmodulin-binding motif | 792 | 808 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | Pfam | IQ calmodulin-binding motif | 836 | 855 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | Pfam | IQ calmodulin-binding motif | 741 | 759 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | Pfam | IQ calmodulin-binding motif | 861 | 878 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | SMART | iq_5 | 761 | 783 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | SMART | iq_5 | 786 | 808 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | SMART | iq_5 | 738 | 760 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | SMART | iq_5 | 809 | 831 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | SMART | iq_5 | 834 | 856 | IPR000048 | GO:0005515(InterPro) | |
| Lac7g0513 | 1712 | FunFam | Myosin XI D | 739 | 788 | - | - | |
| Lac7g0513 | 1712 | Pfam | DIL domain | 1533 | 1637 | IPR002710 | - | |
| Lac7g0513 | 1712 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | PRINTS | Myosin heavy chain signature | 433 | 461 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | PRINTS | Myosin heavy chain signature | 200 | 227 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | PRINTS | Myosin heavy chain signature | 486 | 514 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | ProSiteProfiles | Dilute domain profile. | 1364 | 1658 | IPR002710 | - | |
| Lac7g0513 | 1712 | Gene3D | - | 443 | 627 | - | - | |
| Lac7g0513 | 1712 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 33 | 789 | IPR027417 | - | |
| Lac7g0513 | 1712 | Pfam | Myosin N-terminal SH3-like domain | 12 | 52 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Lac7g0513 | 1712 | Coils | Coil | 908 | 928 | - | - | |
| Lac7g0513 | 1712 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 316 | 605 | - | - | |
| Lac7g0513 | 1712 | Coils | Coil | 1075 | 1122 | - | - | |
| Lac7g0513 | 1712 | SMART | DIL_2 | 1533 | 1640 | IPR002710 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g1312 | Lac-Chr2:10928078 | Lac7g0513 | Lac-Chr7:4083896 | 1.10E-149 | dispersed | |
| Lac4g2056 | Lac-Chr4:40215470 | Lac7g0513 | Lac-Chr7:4083896 | 0.00E+00 | dispersed | |
| Lac6g2827 | Lac-Chr6:45895318 | Lac7g0513 | Lac-Chr7:4083896 | 0.00E+00 | dispersed | |
| Lac7g0513 | Lac-Chr7:4083896 | Lac4g0495 | Lac-Chr4:11472923 | 1.20E-69 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac7g0513 | K10357 | - | csv:101221506 | 1769.21 |