Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0603 | ATGAATTTTGGATCATTTTTCAGTGACGAAGATGAGTTTAAATACTTGCTCATGCTCCTAGGATTTTTAGGAATTTGGAGGCGTTTCGGGACAAACCAGGCGGAACCAGGGTGTCCAGAGGCAGCGGGGACCAAACGGAGGCCATCGAGCTCAGCCCGACCCTTTGGTTTGGTCTTCCTCCGGGTCGGTTTCCTGGTCCTATCTCTACCCGGTTGTCCTCGTCAGCTCTTTGTGCCTCAGGAATTTCGTGGTGGCGGCTACAGAGGATCAGCATTCCGTTCCGACGGCGAGCAGGTGGGCCCGACAATGATCCCCAACCAGATAAACAAACGCGGCGGCCGGCAGTTAAATTCCGCTTTAATCGAGATTCCTTCCACTAAAAAGATTCAAATTCGTAGCAGACCTGCGCTCGACGTCGCTCTGATTCTGATTCCAGATCAGATGGATCCATTAGAGGACCCGAGTTGTTGGGATTTCCTTGATTCCTCCTTGTTCGTCGACGACCACACTATTCCCCACCCTTCGCTCGCTCCTTTCTGGCCGCCTAATGATTCCAGGGATAGTGGTGCGGATACTGATGTTTCAGCTGGGCGTGTTGAAACTGAGGAAACCGATTGTTCGCGGAAGAGGGCACGAGATGGGTCGTGCGCTGGACCAACTTCAAAAGCTTGTCGCGAGAGGTTGCGGAGAGAGAGATTAAATGATAGGTTTCTAGATTTGAGCGTTGCTTTAGAACCTGGTAGACCTACCAAAACTAACAAGCCAGCCATACTTGATGATGCCATTAGAGTGTTAAATCAACTAAAGACTGAAGCCGAAGAGCTCAAACAAACTAATGAAAAGTTGCGAGAAGAAGTGGAGAGTTTGAAGGCAGAAAAGAATGATCTTCGGAAGGAGAAGATCATTTTGAAGGAAGACAAAGAAAGAATCGAGCAACAGTTGAAATCTATAGCCATTCCACCTCCAGGGCTTATCCCTGGTCATCCAGCTGCATATCATGCTGCTCCAGGCAAGATGGCTGTTTTTCCCAGTTATGGTTTGATCCCAATGTGGCAATATCTTCCTCCTTCAGTGCGTGATACATCTCAAGATCATGAGCTCAGGCCTCCTGCTGCCTAG | 1119 | 49.06 | MNFGSFFSDEDEFKYLLMLLGFLGIWRRFGTNQAEPGCPEAAGTKRRPSSSARPFGLVFLRVGFLVLSLPGCPRQLFVPQEFRGGGYRGSAFRSDGEQVGPTMIPNQINKRGGRQLNSALIEIPSTKKIQIRSRPALDVALILIPDQMDPLEDPSCWDFLDSSLFVDDHTIPHPSLAPFWPPNDSRDSGADTDVSAGRVETEETDCSRKRARDGSCAGPTSKACRERLRRERLNDRFLDLSVALEPGRPTKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVESLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPSYGLIPMWQYLPPSVRDTSQDHELRPPAA | 372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4819218 | 4823384 | + | Lag0021120.1 | Lac7g0603 | 613504 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0603 | 372 | Coils | Coil | 258 | 313 | - | - | |
Lac7g0603 | 372 | Pfam | Helix-loop-helix DNA-binding domain | 221 | 269 | IPR011598 | GO:0046983(InterPro) | |
Lac7g0603 | 372 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 217 | 268 | IPR011598 | GO:0046983(InterPro) | |
Lac7g0603 | 372 | SMART | finulus | 223 | 274 | IPR011598 | GO:0046983(InterPro) | |
Lac7g0603 | 372 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 220 | 288 | IPR036638 | GO:0046983(InterPro) | |
Lac7g0603 | 372 | PANTHER | BHLH TRANSCRIPTION FACTOR | 185 | 372 | IPR044818 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006879(InterPro)|GO:0046983(InterPro) | |
Lac7g0603 | 372 | Gene3D | - | 220 | 301 | IPR036638 | GO:0046983(InterPro) | |
Lac7g0603 | 372 | MobiDBLite | consensus disorder prediction | 191 | 212 | - | - | |
Lac7g0603 | 372 | MobiDBLite | consensus disorder prediction | 176 | 221 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac3g0620 | Lac-Chr3:4803100 | Lac7g0603 | Lac-Chr7:4819218 | 9.60E-10 | dispersed | |
Lac7g0603 | Lac-Chr7:4819218 | Lac9g2079 | Lac-Chr9:40394046 | 5.10E-26 | dispersed | |
Lac7g0603 | Lac-Chr7:4819218 | Lac2g1358 | Lac-Chr2:11426874 | 5.50E-28 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
24146 | PF00010 | HLH | 1.10E-07 | No_clan | Lac | TF |
Pathway information
