Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0635 | ATGGGTTTTGCTTCTCTTTCTAAATTAACAAAAGGTCTGGCGAATCCGTGGTGGACCACTCAGGTGGGGCTGCCGGGAGTGGATCATCATCACCCGGGGGCGGTCAACTCACCGATCTTCAAACAGAGCGATGAAAACAGCGGCGGCGGAAGCGGCAGTCGGGACGACGACGACGACGACAACAACCGTGACGAGCCTAAAGAAGGCGCCGTCGAGGCCGGAACTCGTAGACCGAGAGGCCGTCCACCTGGATCTAAAAACAAACCCAAACCTCCCATCTTCGTCACACGTGACAGTCCCAACGCCCTTCGCAGCTACGTCCTAGAGGTCGCCGCCGGATCCGACGTGGCCGATTCCATCGCCCAATTCGCCAGAAAGCGCCAGCGTGGCGTCTGCGTCCTCAGTGCAACCGGCTTGGTCGCCAACGTCACCTTACGTCAGCCCGCTGCCCCCGGTTCCGTAATGCCACTCCAAGGAAGGTTCGAGATTCTCTCTTTAACCGGCGCGTTTCTACCCGGCCCGGCCCCGCCCGGATCCACCGGGCTCACCGTTTACTTGTCCGGCGGTCAGGGGCAGGTCGTCGGCGGGAGCGTTGTTGGGTCGCTTGTGGCGGCCGGACCTATTATGGTAATTGCTGCGACTTTTGCTAATGCGACTTATGAAAGGTTGCCTCTTGAAGATCCCGAAGACCATGAAGTTGGCAGTGGCTCCGCCTCGCACGGAGGCGGTAGAAGCCCGCCGCCAGAAATTAGAGCTGGTGGAGGAGGGCAGATGCCGACTGGGATGCCGGAACCGACTTTGCCGCTGTATAATTTACTGCCGGATATGATGCCGAACGGCGTTCAGCTCGGCCACGACGGGTATGCTTATGTCCGGCCGCCGTATTGA | 888 | 59.68 | MGFASLSKLTKGLANPWWTTQVGLPGVDHHHPGAVNSPIFKQSDENSGGGSGSRDDDDDDNNRDEPKEGAVEAGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSYVLEVAAGSDVADSIAQFARKRQRGVCVLSATGLVANVTLRQPAAPGSVMPLQGRFEILSLTGAFLPGPAPPGSTGLTVYLSGGQGQVVGGSVVGSLVAAGPIMVIAATFANATYERLPLEDPEDHEVGSGSASHGGGRSPPPEIRAGGGGQMPTGMPEPTLPLYNLLPDMMPNGVQLGHDGYAYVRPPY | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5083327 | 5084343 | + | Lag0021152.1 | Lac7g0635 | 613536 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0635 | 295 | CDD | DUF296 | 104 | 186 | IPR005175 | - | |
Lac7g0635 | 295 | Gene3D | - | 103 | 232 | - | - | |
Lac7g0635 | 295 | ProSiteProfiles | PPC domain profile profile. | 100 | 241 | IPR005175 | - | |
Lac7g0635 | 295 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 101 | 228 | - | - | |
Lac7g0635 | 295 | MobiDBLite | consensus disorder prediction | 28 | 98 | - | - | |
Lac7g0635 | 295 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 47 | 288 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Lac7g0635 | 295 | FunFam | AT-hook motif nuclear-localized protein | 103 | 231 | - | - | |
Lac7g0635 | 295 | MobiDBLite | consensus disorder prediction | 227 | 264 | - | - | |
Lac7g0635 | 295 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 104 | 216 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac6g2829 | Lac-Chr6:45927148 | Lac7g0635 | Lac-Chr7:5083327 | 2.70E-83 | dispersed | |
Lac7g0365 | Lac-Chr7:2817085 | Lac7g0635 | Lac-Chr7:5083327 | 6.10E-61 | dispersed | |
Lac7g0635 | Lac-Chr7:5083327 | Lac8g2937 | Lac-Chr8:46379978 | 3.40E-57 | dispersed | |
Lac7g0635 | Lac-Chr7:5083327 | Lac13g1008 | Lac-Chr13:8513065 | 1.50E-65 | transposed |
Pathway information
