Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0635 ATGGGTTTTGCTTCTCTTTCTAAATTAACAAAAGGTCTGGCGAATCCGTGGTGGACCACTCAGGTGGGGCTGCCGGGAGTGGATCATCATCACCCGGGGGCGGTCAACTCACCGATCTTCAAACAGAGCGATGAAAACAGCGGCGGCGGAAGCGGCAGTCGGGACGACGACGACGACGACAACAACCGTGACGAGCCTAAAGAAGGCGCCGTCGAGGCCGGAACTCGTAGACCGAGAGGCCGTCCACCTGGATCTAAAAACAAACCCAAACCTCCCATCTTCGTCACACGTGACAGTCCCAACGCCCTTCGCAGCTACGTCCTAGAGGTCGCCGCCGGATCCGACGTGGCCGATTCCATCGCCCAATTCGCCAGAAAGCGCCAGCGTGGCGTCTGCGTCCTCAGTGCAACCGGCTTGGTCGCCAACGTCACCTTACGTCAGCCCGCTGCCCCCGGTTCCGTAATGCCACTCCAAGGAAGGTTCGAGATTCTCTCTTTAACCGGCGCGTTTCTACCCGGCCCGGCCCCGCCCGGATCCACCGGGCTCACCGTTTACTTGTCCGGCGGTCAGGGGCAGGTCGTCGGCGGGAGCGTTGTTGGGTCGCTTGTGGCGGCCGGACCTATTATGGTAATTGCTGCGACTTTTGCTAATGCGACTTATGAAAGGTTGCCTCTTGAAGATCCCGAAGACCATGAAGTTGGCAGTGGCTCCGCCTCGCACGGAGGCGGTAGAAGCCCGCCGCCAGAAATTAGAGCTGGTGGAGGAGGGCAGATGCCGACTGGGATGCCGGAACCGACTTTGCCGCTGTATAATTTACTGCCGGATATGATGCCGAACGGCGTTCAGCTCGGCCACGACGGGTATGCTTATGTCCGGCCGCCGTATTGA 888 59.68 MGFASLSKLTKGLANPWWTTQVGLPGVDHHHPGAVNSPIFKQSDENSGGGSGSRDDDDDDNNRDEPKEGAVEAGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSYVLEVAAGSDVADSIAQFARKRQRGVCVLSATGLVANVTLRQPAAPGSVMPLQGRFEILSLTGAFLPGPAPPGSTGLTVYLSGGQGQVVGGSVVGSLVAAGPIMVIAATFANATYERLPLEDPEDHEVGSGSASHGGGRSPPPEIRAGGGGQMPTGMPEPTLPLYNLLPDMMPNGVQLGHDGYAYVRPPY 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5083327 5084343 + Lag0021152.1 Lac7g0635 613536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0635 295 CDD DUF296 104 186 IPR005175 -
Lac7g0635 295 Gene3D - 103 232 - -
Lac7g0635 295 ProSiteProfiles PPC domain profile profile. 100 241 IPR005175 -
Lac7g0635 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 228 - -
Lac7g0635 295 MobiDBLite consensus disorder prediction 28 98 - -
Lac7g0635 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 288 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Lac7g0635 295 FunFam AT-hook motif nuclear-localized protein 103 231 - -
Lac7g0635 295 MobiDBLite consensus disorder prediction 227 264 - -
Lac7g0635 295 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 216 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2829 Lac-Chr6:45927148 Lac7g0635 Lac-Chr7:5083327 2.70E-83 dispersed
Lac7g0365 Lac-Chr7:2817085 Lac7g0635 Lac-Chr7:5083327 6.10E-61 dispersed
Lac7g0635 Lac-Chr7:5083327 Lac8g2937 Lac-Chr8:46379978 3.40E-57 dispersed
Lac7g0635 Lac-Chr7:5083327 Lac13g1008 Lac-Chr13:8513065 1.50E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0635 - - - 0.0