Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0640 ATGAAACCTTCTCGTCTAAATTCCCTCCGGCGAGTTCAGTCCGGCGACCTCGTCATGAAGCTCCCCGACGATCCAGACGAATCCAAGAGGCCCCAATTCCCTCTCGATTCAAGTTGTTACAAAATCGTCGACGAAATTGGAGTCGGCGTCAGCGCCGTCGTCTACAAAGCCATCTGCGTTCCGATGAACTCTGCAGTGGTGGCCATCAAAGCCATCGACCTCGATCGATCACGAACCGATTTCGACGACATTCGAAGAGAAGCCAAAATTCTGTCACTTCTCTCTCACCCCAACATTTTAAACGCCCATTGTTCTTTCACTGTCGATCGGCAGCTCTGGGTCGTGATGCCGTTCATGTCGGCCGGTTCTCTGCAGTCCATCATTACGTCGTCGTTTCCCGATGGATTGCCGGAGCCCTGCATCGCCGTCGTTCTCCGTGAAATTCTCAACGCTCTGTCTTACCTCCACGACCAAGGCCACCTCCACCGCGACATTAAAGCCGGCAACATTCTGATGGACTCAAACGGGTCCGTCAAGCTCGCCGATTTCGGAGTTTCGACGTCGATTTTCGAGGCGAATTCGAAACAGGGGATGTCAATTTCTTCATTATCGAATTCGATGATGCTGAACGAAGTCGCCGGAACGCCGTACTGGATGGCACCGGAGGTGATCCACTCGCACAATGGGTATAGTTTGAAGGCGGATATATGGTCGTTTGGAATCACAGCGTTAGAATTAGCCCATGGACGGCCTCCCCTGTCTCATCTCCCTCCGTCCAAATCTCTGCTCCTGAAAATCACACGGCGGTTTCGATTCTCCGATTACGAGAAGCACCAAGACAGCAAGAACAGGAACAAATTCTCAAAAGGGTTCAAGGAAATGGTCGCGTCTTGTCTCGATCAGGAGCCATCAAAAAGACCCTGCGCGCAGAAATTGCTCAAACACTCGTTCTTCAGGAACTGCAAGGGCCCTGATCTTCTCGTAAAGACTGTGCTGCAGGGTTTGCCGAGCGTGGAAGAACGGTTCAAAGTGGGGAAACTGCAGCGACTGCCGTCGATGAAGAACGAGGAAGACGAGGAGGAGGAATTGGAGAAGGAGATTATAAAACAGAGGAGGATCAGTGGGTGGAATTTCAACGAGGATGGACTCGAACTGGAGCCTGTTTTTCCAGGGGAAAGTTGCGAGGCTGATGAGTGTTCGATTATAAAGCAGGTTCGATTCGGAGGGGAATCGATCATCGAGGAGAAGGGGTCGGGGGATTCGAGCGAGTGCTGTTCGGGGGTGTCGGAGGAGGTTGTGGAGAGGGAGTCGATAGTGGGGGGGCTGGTGGCGCTGAAGAGGAGCCTGGACGAGCAGAGGAGGGCGGTGGGGAGTTTGATAGAGCTGATGGAAGGAGAGAACGGAGGAGAGATTAGCAGAGAGGAGCAAATGGGGAGACTGATGGAGAAGATGACGAGGGAGTTGGAGAATGAGAGGAAGAGGAACTTTGAATTGGAGATGGAGTTGGAATTTCTCAGGCTTCAGATTTCCGCTGCTTGTAATAATGGCGGTGGTTCTGCCGCCATTCATAGCTGA 1575 52.38 MKPSRLNSLRRVQSGDLVMKLPDDPDESKRPQFPLDSSCYKIVDEIGVGVSAVVYKAICVPMNSAVVAIKAIDLDRSRTDFDDIRREAKILSLLSHPNILNAHCSFTVDRQLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILNALSYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSTSIFEANSKQGMSISSLSNSMMLNEVAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYEKHQDSKNRNKFSKGFKEMVASCLDQEPSKRPCAQKLLKHSFFRNCKGPDLLVKTVLQGLPSVEERFKVGKLQRLPSMKNEEDEEEELEKEIIKQRRISGWNFNEDGLELEPVFPGESCEADECSIIKQVRFGGESIIEEKGSGDSSECCSGVSEEVVERESIVGGLVALKRSLDEQRRAVGSLIELMEGENGGEISREEQMGRLMEKMTRELENERKRNFELEMELEFLRLQISAACNNGGGSAAIHS 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5140768 5142342 - Lag0021157.1 Lac7g0640 613541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0640 524 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Lac7g0640 524 Coils Coil 474 508 - -
Lac7g0640 524 SMART serkin_6 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0640 524 Gene3D Transferase(Phosphotransferase) domain 1 122 372 - -
Lac7g0640 524 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 32 390 IPR047173 GO:0043539(InterPro)|GO:1902456(PANTHER)
Lac7g0640 524 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Lac7g0640 524 Coils Coil 353 373 - -
Lac7g0640 524 Pfam Protein kinase domain 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0640 524 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524(InterPro)
Lac7g0640 524 FunFam Serine/threonine-protein kinase BLUS1 29 118 - -
Lac7g0640 524 ProSiteProfiles Protein kinase domain profile. 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0640 Lac-Chr7:5140768 Lac8g2588 Lac-Chr8:43528216 1.10E-93 dispersed
Lac7g0640 Lac-Chr7:5140768 Lac5g2947 Lac-Chr5:47502179 1.50E-31 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86319 PF00069 Pkinase 4.40E-59 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0640 K08835 - csv:101215648 808.135