Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0679 ATGGAGCCAGGGCCCCGGCCTACGCCCGCGGCAGCCCAGCCGTCAACCGCCGCTATCCTTCTCGGAAAGTATCGCTTAGGCCGCCTTCTCGGCCGCGGCAGCTTCGCCAAAGTCTACCAAGCAGTTTCCTTAGCCGACAACTCCACTGTCGCCGTTAAAATCATCGACAAATCCAAAACCGTCGGCCCCGCCCTCGAACGCTGCATAATCCGGGAGGTCGCCGCCATGCGCCGCCTCGATCACCCAAACATCCTCAAAATCCACGAAGTCATGGCCACCAAGTCCAAAATCTACCTGGTGGTGGAATTCGCCGCCGGCGGCGAACTTTTCGCCAAAATCTCCCGGCGTGGACGGTTCACCGAAACCGTCTCTCGCCGGTACTTCCAACAACTCGTTTCAGCCCTCAAATTCTGCCACGAAAACGGCGTCGTCCACCGCGATGTGAAGCCGCAGAATCTTCTGCTAGACGAACAGGGCAATTTGAAAATCTCCGATTTCGGACTCTCTGCTTTACCCGACCAGCTCAAAGACGGGTTGTTGCTCCAAACGGCTTGCGGAACTCCGGCGTACTCCGCCCCAGAGGTCATGCTCCGCCGCGGCGGCGGATACGACGGCGCAAAGGCCGACGCCTGGTCCTGTGGAGTGATTTTATTCGTGTTACTCTCTGGATTCCTCCCTTTCGACGACAGTAACCTCGCGGCGATGTACAAGAAAATCCACCGGCGGGATTTTCAAATCCCCAATTGGATTTCGAAGCCGGTTCGGTTCCTGATTTATCACCTGCTCGATCCGAATCCGAGAACGAGGATGAGCATTGAGGCGCTAATGCAAAACCCTTGGTTCAAGAAATCGCTGCAACAGAAACAGAGTAACGAGAGTCTGTTGCAATCGATGAGGGATTATCGATTGGGGAAGGAGAGGGGAATTGGGGAAATGAATGCGTTCGATATAATTTCGATGTCGTCGGGGTTGGATCTGTCTGGGCTGTTTGAGACGGCGGAGAAGAGGGCGGAGAGGAGGTTCACGGCGAGGGCGACGGTGAAGGAGGTGGAAGAGAGGGTGAGGGAGATCGGCGGGGAGTTGGGGTATGAGATGGAGGCGAAGGGAGGGGCGATCGGAATGGGGAAGGGGAGGGTGGTGGTGGTGGTGGAAGTGGTGGAGGTGGCGGCGGCGAGAGTGACGATGGTGGAGGTGAGGGTGGTGAAAGGAGGAGAGGAGTTTGAAGAGGTCCATTGGAGGGGTTTGGAAGGTAAGCTTGAAGGATTTGCAGTTCCATGGGAGAGGAAATGTAATCTGTGA 1299 56.51 MEPGPRPTPAAAQPSTAAILLGKYRLGRLLGRGSFAKVYQAVSLADNSTVAVKIIDKSKTVGPALERCIIREVAAMRRLDHPNILKIHEVMATKSKIYLVVEFAAGGELFAKISRRGRFTETVSRRYFQQLVSALKFCHENGVVHRDVKPQNLLLDEQGNLKISDFGLSALPDQLKDGLLLQTACGTPAYSAPEVMLRRGGGYDGAKADAWSCGVILFVLLSGFLPFDDSNLAAMYKKIHRRDFQIPNWISKPVRFLIYHLLDPNPRTRMSIEALMQNPWFKKSLQQKQSNESLLQSMRDYRLGKERGIGEMNAFDIISMSSGLDLSGLFETAEKRAERRFTARATVKEVEERVREIGGELGYEMEAKGGAIGMGKGRVVVVVEVVEVAAARVTMVEVRVVKGGEEFEEVHWRGLEGKLEGFAVPWERKCNL 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5439043 5440341 - Lag0021196.1 Lac7g0679 613580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0679 432 CDD CIPK_C 313 416 - -
Lac7g0679 432 FunFam Aurora kinase A 16 107 - -
Lac7g0679 432 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0679 432 Gene3D Transferase(Phosphotransferase) domain 1 106 304 - -
Lac7g0679 432 Pfam Protein kinase domain 24 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0679 432 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165(InterPro)
Lac7g0679 432 FunFam Non-specific serine/threonine protein kinase 14 305 - -
Lac7g0679 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0679 432 SMART serkin_6 24 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0679 432 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524(InterPro)
Lac7g0679 432 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Lac7g0679 432 Pfam NAF domain 312 365 IPR004041 GO:0007165(InterPro)
Lac7g0679 432 Gene3D Kinase associated domain 1, KA1 308 423 - -
Lac7g0679 432 SUPERFAMILY Protein kinase-like (PK-like) 20 293 IPR011009 -
Lac7g0679 432 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 19 399 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0679 Lac-Chr7:5439043 Lac9g2336 Lac-Chr9:42677221 1.20E-95 dispersed
Lac10g0961 Lac-Chr10:7689394 Lac7g0679 Lac-Chr7:5439043 3.80E-87 wgd
Lac12g2230 Lac-Chr12:39495079 Lac7g0679 Lac-Chr7:5439043 1.40E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86321 PF00069 Pkinase 5.00E-70 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0679 K12761 - csv:101217555 667.537