Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0694 ATGCCCGTACGGCAAATGAAAGAGAGCTCCGAGCAGCACCTTGTAATCAAAACCCACTTCCAGAACACTGTTCAAAAAGCTCCAAAATCAACCCAAAATGGCAAAGGCCCGCCGAATCTGGAACACCAAAACATCAAATCTCGAAACCCATCTTCTCCTCCGAGCAAAAACAGAGGCCGGAGAAGGAGCAGAGGCGGCCGGAAATCCGATCAGGGAGAAGTCTGTATGAGGCCCAGTTCTCGGCCCTGCACGGTGGCGCTTAAACCCGACGGACCGGAGATTACCGCCGGAGCTCTAGTGGCGAGTGTTAATCCTAATCCAAATGGTGGAAACATTTGTGGGATGGAAATTGGTTTTCGAAATTCAAGCAAGTCTGTGAGTTTTGCCCCAAGGCCTGGATTCGGACAAGTTGGGACAAAGTGTATTGTAAAAGCAAACCATTTCTTTGCAGAGTTACCAGACAAAGATTTGAATCAATATGATGTTACAATTACTCCTGAAGTGGCATCAAGAACTGTTAACAGAGCCATCATGGCTGAATTGGTGAGATTATACAGAGAATCTGATCTGGGAAAAAGATTACCAGCTTATGATGGCAGAAAGAGTCTGTATACAGCTGGTGAGCTTCCTTTTGTTTGGAAAGAGTTTAACATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAATATAAAGTGGTCATTAAGTTTGTTGCACGTGCAAACTTACACCATTTGGGTCAGTTTCTCGCGGGTAAGCGCGCGGATGCTCCACAAGAAGCTCTTCAAATACTGGACATTGTATTGAGAGAGCTGTCATCCAAAAGGTACTGCCCCATTGGGAGATCCTTCTTTTCTCCTGATATTAGATCACCTCAGCGGCTCGGTGATGGGCTGGAATCATGGTGTGGTTTTTATCAGAGTATAAGACCTACTCAGATGGGACTGTCTCTTAACATTGATATGGCTTCAGCTGCATTTATCGAGCCTCTCCCTGTCCTTGAGTTTGTTGCTCAGCTTCTAGGGAAGGATGTTTTGTCCCGGCCATTGTCTGATTCGGATCGCGTAAAGATCAAAAAGGCTCTTAGAGGGGTGAAAGTTGAAGTAACGCACCGGGGTAATGTAAGGCGGAAGTATCGAGTTTCGGGTCTGACATCACAGCCTACAAGAGAACTAGTGTTTCCTGTTGATGACAACTCAACCATGAAGTCAGTTGTTGAATACTTCCAAGAGATGTATGGCTTCACCATTCAACATGCACATCTCCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGCAAATTATTTACCAATGGAGGCCTGCAAAATTGTAGGGGGGCAAAGATATACAAAGAGATTGAATGAGAAGCAAATAACCGCACTTCTAAAAGTCACATGTCAAAGACCTAGGGATCGAGAAAATGACATTTTGCAGACTGTTCAACATAATGCCTATGACAATGATCCTTATGCAAAGGAGTTTGGGATTAAAATCAGTGAAAAGCTGGCTTCTGTTGAAGCTAGAATTCTTCCTCCTCCATGGCTGAAATATCATGATACTGGAAAAGAGAAGGATTGCTTGCCTCAAGTCGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACCGTTAACCGGTGGGCATGTATCAACTTCTCTAGGAGCGTGCAAGAGAGCGTTGCTCGTGGGTTTTGTTCTGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCAGAACCAGTTATTCCAATTTACAATGCAAGGCCAGAACAGGTAGAGAAAGCTTTGAAGCATGTTTATCATGCTTCGATGAACAAGACAAAAGGAAAAGAGTTAGAGCTTTTATTAGCTATTTTACCTGACAATAATGGTTCACTTTACGGTGATCTTAAGCGAATTTGTGAAACTGATCTTGGTCTAATATCACAATGCTGTCTTACAAAACACGTGTTCAAGATTAGTAAGCAGTACCTCGCTAACGTCTCACTGAAGATCAATGTCAAGATGGGTGGTAGGAACACTGTTCTTCTAGATGCCATCAGCTGCAGGATACCGCTTGTGAGTGACATACCAACAATAATATTTGGAGCGGACGTGACCCATCCAGAGAATGGCGAAGATTCCAGCCCTTCAATAGCTGCTGTTGTAGCCTCTCAGGATTGGCCTGAAGTGACAAAATATGCTGGACTAGTATGTGCTCAGGCTCATAGACAAGAACTTATACAAGACTTGTATAAAACTTGGCAGGATCCTGTCCGTGGCACCGTCAGTGGTGGCATGATCAGGGATCTTCTGATCTCCTTTAGGAAAGCAACGGGGCAGAAGCCTCTAAGAATAATATTTTACAGGGATGGCGTAAGTGAAGGACAATTCTATCAAGTATTACTTTATGAGTTGGATGCAATCAGGAAGGCATGTGCATCTTTAGAACCGAATTACCAACCACCCGTAACGTTCATTGTTGTACAAAAACGACACCACACCCGATTGTTTGCCAACAACTATAGAGACCGAAGTAGCACAGACAAGAGTGGAAACATTTTGCCTGGTACTGTTGTTGACTCCAAAATATGCCACCCAACAGAATTTGATTTCTATCTCTGTAGCCATGCTGGAATTCAGGGTACAAGTCGGCCAGCTCACTACCATGTTCTTTGGGATGAAAACAATTTTACTGCAGATGGAATTCAGTCGTTAACGAACAACCTTTGCTACACATATGCCAGGTGTACGCGTTCGGTTTCTGTCGTCCCTCCAGCATACTATGCACACTTAGCAGCATTCCGAGCTCGATTCTACATGGAACCAGAGATGCAAGAGAATGGCTCGGGTGGTCGTTCTGCCAAGAGTACACGTGCTACCGGAGAGACTGGGGTTCGTCCTTTGCCAGCTCTAAAGGAAAATGTGAAGAGAGTAATGTTCTACTGTTAG 2961 44.28 MPVRQMKESSEQHLVIKTHFQNTVQKAPKSTQNGKGPPNLEHQNIKSRNPSSPPSKNRGRRRSRGGRKSDQGEVCMRPSSRPCTVALKPDGPEITAGALVASVNPNPNGGNICGMEIGFRNSSKSVSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFVWKEFNIKLVDEEDGVSGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVAQLLGKDVLSRPLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNAYDNDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNPEPVIPIYNARPEQVEKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSGGRSAKSTRATGETGVRPLPALKENVKRVMFYC 986
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5568726 5575352 + Lag0021211.1 Lac7g0694 613595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0694 986 Pfam Argonaute linker 2 domain 476 522 IPR032472 -
Lac7g0694 986 SMART DUF1785_2 283 335 IPR014811 -
Lac7g0694 986 FunFam Protein argonaute-2 329 455 - -
Lac7g0694 986 CDD PAZ_argonaute_like 335 449 - -
Lac7g0694 986 Gene3D paz domain 329 454 - -
Lac7g0694 986 MobiDBLite consensus disorder prediction 21 82 - -
Lac7g0694 986 FunFam protein argonaute 10-like 693 986 - -
Lac7g0694 986 Pfam Argonaute linker 1 domain 284 334 IPR014811 -
Lac7g0694 986 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 131 951 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Lac7g0694 986 FunFam Argonaute 10 514 687 - -
Lac7g0694 986 Gene3D - 514 687 - -
Lac7g0694 986 ProSiteProfiles PAZ domain profile. 337 450 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Lac7g0694 986 Pfam PAZ domain 362 466 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Lac7g0694 986 Pfam Mid domain of argonaute 533 610 IPR032473 -
Lac7g0694 986 ProSiteProfiles Piwi domain profile. 624 945 IPR003165 GO:0003676(InterPro)
Lac7g0694 986 Gene3D - 693 986 IPR036397 GO:0003676(InterPro)
Lac7g0694 986 Pfam N-terminal domain of argonaute 140 274 IPR032474 -
Lac7g0694 986 MobiDBLite consensus disorder prediction 949 968 - -
Lac7g0694 986 SUPERFAMILY Ribonuclease H-like 612 945 IPR012337 -
Lac7g0694 986 MobiDBLite consensus disorder prediction 21 54 - -
Lac7g0694 986 SMART Piwi_a_2 624 945 IPR003165 GO:0003676(InterPro)
Lac7g0694 986 SMART PAZ_2_a_3 340 472 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Lac7g0694 986 CDD Piwi_ago-like 494 944 IPR045246 -
Lac7g0694 986 Pfam Piwi domain 625 944 IPR003165 GO:0003676(InterPro)
Lac7g0694 986 SUPERFAMILY PAZ domain 330 490 IPR036085 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0040 Lac-Chr10:427453 Lac7g0694 Lac-Chr7:5568726 0.00E+00 transposed
Lac10g2027 Lac-Chr10:28696935 Lac7g0694 Lac-Chr7:5568726 1.40E-301 transposed
Lac13g0348 Lac-Chr13:2492529 Lac7g0694 Lac-Chr7:5568726 1.10E-171 transposed
Lac9g2938 Lac-Chr9:47157603 Lac7g0694 Lac-Chr7:5568726 5.20E-144 transposed
Lac3g0857 Lac-Chr3:6868219 Lac7g0694 Lac-Chr7:5568726 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0694 K11593 - csv:101221352 1914.81