Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0710 ATGGTTAAAATTGTTACAACTTGCAAAATTCAGGGTTCTTGTTACTACCATGCCCCATTAAACCTCCTCCAAAATGAAAACCTCAAAATCCCTTCTCCCAAAATCCCTCCTAATCTTCATTCTCATCCTCCTCCCAAAACCTTCCCATCAAGCATCTTCGCCGCTGCCATCGCCATCGCCATCGCCGCCATCCCTCCCGAACCCGAGGCTCCTCAAGGCCTACTCTGCTCTCCAAGCTTGGAAACACGCCATCACCGCCGACCCGACCAACTTCACCGCCGATTGGTACGGCCCCAATGTCTGCAACTACTCCGGCGTCTTCTGCGCCCCCGCCCCGACGACCCCTACATCCTCACCGTCGCCGGGATCGACCTCAACCACGCCAACCTCTCGGGCACCCTGCCCGACGACCTCGGCCTCCTGACCGACCTTGCCCTGTTCCACATCAACTCCAATCGCTTCTGCGGCACCATCCCCAACTCCTTCCGGTGCCTCACTCTCCTCTTCGAGCTGGACGTCAGCAACAATGACTTCTCCGGCGAGTTCCCTTCTGTAATTCTCTCTCTCCCATCTCTCAAATTCCTCGACATTCGATTCAACAAATTCCATGGCGATCTCCCTTCTCCCCTGTTTGACTTGAAACTCGATGCTCTGTTCATCAACAACAACGATTTCAAATTCTTCCTGCCGGAAAACATCGGCAATTCCCCTGTTTCCGTTCTGGTTTTTGCTAATAACAACATCAATGGCTGCCTCCCCTCGAGTTTATCCAATATGAACAGAACACTCAATGAAATTATAATCACGAGCAGTGGGTTGACTGGGTGTTTGCCGCCGGAAATTGGGTCGTTGAGCAATCTCACCGTCTTCGATGTCAGTGACAACAATCTCGTCGGGCCGTTGCCGGAGACGATGGCCGGAATGAAGAAATTGGAGCAGCTAAACGTCGCACATAACCAACTATCCGGCGAGATTCCGGCGAGTATTTGCTCGTTGCCGAAATTGCAGAATTTCACTTACTCGTATAACTTCTTCTGCAGTGAGCCGTCGGTGTGCCTGAAACTTCAAGCCAGTGATGACCGGAAAAATTGTTTGCCGGAAAGGCCGCTGCAACGTTCGCCGGAGGAATGTAAAGCTTTCTACTCTTATCCTGTTGATTGCACCGTCTTTGGCTGTACTCGTCGGCCGCCTCCGCCTCCGCCGCCTCCACCTCCACCTCCACCTCCACCACCACCACCTCCACCGCCGCCGCCACCTCCACCTCCACCTCCACCTCCGCCGCCGCTTTATTAG 1293 53.67 MVKIVTTCKIQGSCYYHAPLNLLQNENLKIPSPKIPPNLHSHPPPKTFPSSIFAAAIAIAIAAIPPEPEAPQGLLCSPSLETRHHRRPDQLHRRLVRPQCLQLLRRLLRPRPDDPYILTVAGIDLNHANLSGTLPDDLGLLTDLALFHINSNRFCGTIPNSFRCLTLLFELDVSNNDFSGEFPSVILSLPSLKFLDIRFNKFHGDLPSPLFDLKLDALFINNNDFKFFLPENIGNSPVSVLVFANNNINGCLPSSLSNMNRTLNEIIITSSGLTGCLPPEIGSLSNLTVFDVSDNNLVGPLPETMAGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTYSYNFFCSEPSVCLKLQASDDRKNCLPERPLQRSPEECKAFYSYPVDCTVFGCTRRPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLY 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5721857 5723458 + Lag0021227.1 Lac7g0710 613611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0710 430 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 259 348 - -
Lac7g0710 430 Pfam Leucine Rich Repeat 168 188 IPR001611 GO:0005515(InterPro)
Lac7g0710 430 Pfam Leucine Rich Repeat 191 212 IPR001611 GO:0005515(InterPro)
Lac7g0710 430 SUPERFAMILY L domain-like 116 354 - -
Lac7g0710 430 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 110 425 IPR051582 -
Lac7g0710 430 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 117 206 - -
Lac7g0710 430 Pfam Leucine rich repeat 262 321 IPR001611 GO:0005515(InterPro)
Lac7g0710 430 Gene3D Ribonuclease Inhibitor 117 367 IPR032675 -
Lac7g0710 430 MobiDBLite consensus disorder prediction 394 430 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0645 Lac-Chr6:5456797 Lac7g0710 Lac-Chr7:5721857 2.50E-07 dispersed
Lac6g0648 Lac-Chr6:5472295 Lac7g0710 Lac-Chr7:5721857 1.30E-37 dispersed
Lac6g2988 Lac-Chr6:47471664 Lac7g0710 Lac-Chr7:5721857 1.20E-19 dispersed
Lac7g0710 Lac-Chr7:5721857 Lac10g2515 Lac-Chr10:39032431 9.70E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0710 - - - 0.0