Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0715 ATGGATTCGAAAGGAAACGATGTGGGGGGTATTACGATCCCCAAGGAGACAGAGAGCGAGGATAGAACTCTGAACTCAAGGATGGCTGGTATGGGAAGCATTAGCAGCAAAGATATGATATTCAGAGCAGATAAGATTGATTTGAAAAACCTGGATATGCAGCTGGAAAAGCACTTGAGCCGTGTTTGGTCAAAGAGCGTTGAGACCCAAAAGCCTAAGGAGGAGTGGGAGATCGATCTGGCTAAACTTGATATCCGATATGTTGTTGCTCACGGGACTTATGGAACTGTATTCAGGGGTACATATGACAATCAAGATGTTGCAGTGAAGCTATTGGACTGGGGGGAGGATGGTCTTGCCACAACTGCTGAAACAGCTGCTTTGCGGGCATCATTTCGGCAAGAGGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAATTTGTTGGAGCTTCAATGGGAGCTACAAATCTTAAGATTCCTTCAAAAGGTTCTTCAATGGATAGTCAAAATTCGCTTCCATCTAGGGCCTGCTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAACAATACTTGATAAGGAACAGGAGAAAGAAACTTGCCTTTAAGGTTGTGATTCAATTAGCTTTGGATCTCTCTAGAGGGCTTAGCTATCTACACTCCAAGAAGATTGTACACCGTGATGTCAAAACTGAAAATATGTTGATAGATGGTCAAAGAACTCTTAAAATTGCTGATTTTGGGGTTGCCCGTGTTGAAGCTCAGAATCCAAGAGACATGACTGGGGAAACTGGTACCCTTGGATACATGGCCCCAGAGGTTCTTGATGGGAAGCCGTACAATAGAAGATGTGATGTCTATAGCTTTGGCATCTGCTTATGGGAAATTTACTGCTGTGATATGCCTTACCCCGATCTTAGTTTCGCTGACGTGTCGTCTGCAGTTGTTCGACAGAATCTGCGACCTGATATCCCGAAATGCTGTCCAAGTTCGCTGGCTAATGTGATGAAGAAATGTTGGGATGGAAACCCATCCAAACGCCCTGAAATGGATGAGGTTGTCAAAATGTTGGAAGTCATTGATACAACTAAAGGAGGTGGGATGGTTACTGATGACCAAGTCCCTGGCTGCTTCTGTTTCGGCCCGCCCCGGGGTCCGTAA 1173 44.93 MDSKGNDVGGITIPKETESEDRTLNSRMAGMGSISSKDMIFRADKIDLKNLDMQLEKHLSRVWSKSVETQKPKEEWEIDLAKLDIRYVVAHGTYGTVFRGTYDNQDVAVKLLDWGEDGLATTAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGATNLKIPSKGSSMDSQNSLPSRACCVVVEYLPGGTLKQYLIRNRRKKLAFKVVIQLALDLSRGLSYLHSKKIVHRDVKTENMLIDGQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPKCCPSSLANVMKKCWDGNPSKRPEMDEVVKMLEVIDTTKGGGMVTDDQVPGCFCFGPPRGP 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5779257 5782041 + Lag0021232.1 Lac7g0715 613616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0715 390 CDD STKc_MAP3K-like 89 361 - -
Lac7g0715 390 ProSiteProfiles Protein kinase domain profile. 83 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0715 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0715 390 SMART serkin_6 83 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0715 390 Gene3D Phosphorylase Kinase; domain 1 72 164 - -
Lac7g0715 390 Pfam Protein tyrosine and serine/threonine kinase 87 361 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0715 390 FunFam Kinase suppressor of Ras 1 72 166 - -
Lac7g0715 390 Gene3D Transferase(Phosphotransferase) domain 1 187 374 - -
Lac7g0715 390 FunFam Serine/threonine-protein kinase HT1 187 372 - -
Lac7g0715 390 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 362 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Lac7g0715 390 PRINTS Tyrosine kinase catalytic domain signature 332 354 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0715 390 PRINTS Tyrosine kinase catalytic domain signature 184 197 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0715 390 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0715 390 PRINTS Tyrosine kinase catalytic domain signature 222 240 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0715 390 SUPERFAMILY Protein kinase-like (PK-like) 62 362 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0715 Lac-Chr7:5779257 Lac8g0305 Lac-Chr8:3607110 4.50E-150 dispersed
Lac10g0915 Lac-Chr10:7306255 Lac7g0715 Lac-Chr7:5779257 2.40E-26 wgd
Lac4g2252 Lac-Chr4:42223989 Lac7g0715 Lac-Chr7:5779257 1.90E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86322 PF07714 PK_Tyr_Ser-Thr 2.20E-59 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0715 - - - 0.0