Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0812 ATGGGTTGTGTTCTTGGTAAGTGTTGCACTTCCAGCCGTCGCTACGCGCCGTCTTCTGACGGCGATATGACGCAATTTTGTGATGCCCCGCCGTATAGTTTACAAGGGAAACATATACTAACGGGAAGGTCATTGGAGGCTGTTCGTGTGCCTTCTCACAACTTCCATATGGAGTACTCGCTCCTGACCCAGCGCGGCTACTACCCTGATTCCCCTGATAAAGACAACCAAGATAGCTTCTGTGTTAGTACACAAATTCGAGGTGACCCGAATATCCATTTCTTTGGTGTTTTTGATGGGCACGGTCAATTCGGATCGCAGTGTTCGACTTTCGTTAAGGAGAGGGTTGTGCGAATACTATCTAATGATCCAACATTGTTGGAAGATCCTGTTAAAGCTTATAATTCGGCATTCTTGACCACAAATGAGGAATTGCATAATAGCGAGATTGATGATTCCATGAGTGGCACAACAGCTATTACTGTTCTTGTTCTTGGGAATACTCTTTATGTTGCGAATGTGGGTGATTCGAGGGCAGTCATAGCTGTTAAAGATGGGAATCGAATTGTTGCTGAGGATATGTCCCATGATCAAACACCATTTAGGAAGGATGAGTGCGAGCGAGTAAAGCTCGCCGGGGCTAGGGTGTTGACAATTGATCAAATTGAAGGGCTTAAGGATCCGGATATTCAAGTATGGGGTGATGAGGAGAGCGAGGGAAATGATCCTCCTCGGTTGTGGTTTCCTAATAGCTTGTTTCCTGGAACTGCATTTACACGGAGTGTAGGAGACAGTACAGCGGAGAAGATTGGTGTCACTGCTGTCCCTGAGGTTTCAGTAGTTCAGCTGAATCAAAACCATCTTTTCTTTGTCGTTGCTAGCGATGGAGTGTTCGAGTTCCTTACAAGTCAAGCTGTAGTTGATATGGCTGCAAGGTACTCCGATCCACGAGATGCATGCTCTGCTATTGCCGGAGAGTCATACAAGCTATGGTTGGAGCATGAAAACCGGACAGATGACATAACAATCATCATCGTTCACATCAAAGGCCTCTCTAATTCAGGTGTTGTTGCAACTGCTGGGCTGAACGGGCTTCGCATAAGGCATACAAATTCTGAGCGGGGAACCTCTGAGATATCAGCCTTCACTGGAAGTTCAGAGGCCTTTCGCTCCATCAGAAGTGATTTCTCAGATCTGCAGACCTCTCAGCATGTGGGTTTGATGAACAGGAGCACAGCAATTGTTGTTCCATCTCCCACGCAGCACCGGCCATTGGAAGTGTGTATTTCTTGGAAACTTCATATTATATCCATGTGTCTGGTAACAGGAAGTGGGCTAATGGGGGTTATGCTTTCCTCTCGCTGCCGAAAAATTTGCTTGTTTCACTCGTTTCACTGGTCACGAAGTTCTCTTACTGTCAATGTTGCTGGTAACAATCCTTCTAACCACAAGAAGGGGCAGTATGAGAAACCAAAGATGTTTTCCATTGAACGGAATTCGGAGAGAAGGAAATTGACATGGTGGTGGTGGTGGTGGTTTGGTTTCTTAGCTTCCTCCATGAGCAACATAAAAATAGAAGAAGTAAGGGCACTTGAAGTGTTGGGAATGGATCCGGAATGGATCCTTGTCATTGTCGGCAGCATCTCTTGCATAAATATTGTCTACATGCAGCAGTGGCCTACATGTCTCTGCCCTTCTAAACAAATGCTAAAGTCTGTGAAATTAGAGGCTGGGAGCTGTCTAGCAGCAGTCTTTTTTAGCTTAACCATGAACAAAACTGCTCAGTATAGGGGAAAAAAGTGTAGAGCAATGTTACAGAATATTTGGACCCATGCATTGTTCCAGATTGCTAAAATGCTTCCTAGTCAAGTCGTTGAGAAAGTGGATAGAAGGTTGTTGATGAGGTTTGCATACTTTTGGATGACAAGAAGAAGCGTCATTGAGAGGAGGAACAATGTAGGTTTATGGCAATCCTTTGAGACCATTGATGTCTTGAGTACCATTCACTTAGAAGTTCTCCATGGTTTGGTGTCGGGAGATTATGTGGTTGAATATGGAGAAGATCGAAGTGGAGAAGAGTTTGAGGATTTCTTGACGGATATGAAGGCAATTGGTAGACCTCTTGTCGTATCTTATATCAAGTATTTATTAATTTCAGGAATTCGAGAAATCAAAGGAGGTAAAAAATTGGTGATGCAAGAAGGGGGAGTCGTCAATCGAGTAATGACTTATCAAAAATTGTGA 2244 44.25 MGCVLGKCCTSSRRYAPSSDGDMTQFCDAPPYSLQGKHILTGRSLEAVRVPSHNFHMEYSLLTQRGYYPDSPDKDNQDSFCVSTQIRGDPNIHFFGVFDGHGQFGSQCSTFVKERVVRILSNDPTLLEDPVKAYNSAFLTTNEELHNSEIDDSMSGTTAITVLVLGNTLYVANVGDSRAVIAVKDGNRIVAEDMSHDQTPFRKDECERVKLAGARVLTIDQIEGLKDPDIQVWGDEESEGNDPPRLWFPNSLFPGTAFTRSVGDSTAEKIGVTAVPEVSVVQLNQNHLFFVVASDGVFEFLTSQAVVDMAARYSDPRDACSAIAGESYKLWLEHENRTDDITIIIVHIKGLSNSGVVATAGLNGLRIRHTNSERGTSEISAFTGSSEAFRSIRSDFSDLQTSQHVGLMNRSTAIVVPSPTQHRPLEVCISWKLHIISMCLVTGSGLMGVMLSSRCRKICLFHSFHWSRSSLTVNVAGNNPSNHKKGQYEKPKMFSIERNSERRKLTWWWWWWFGFLASSMSNIKIEEVRALEVLGMDPEWILVIVGSISCINIVYMQQWPTCLCPSKQMLKSVKLEAGSCLAAVFFSLTMNKTAQYRGKKCRAMLQNIWTHALFQIAKMLPSQVVEKVDRRLLMRFAYFWMTRRSVIERRNNVGLWQSFETIDVLSTIHLEVLHGLVSGDYVVEYGEDRSGEEFEDFLTDMKAIGRPLVVSYIKYLLISGIREIKGGKKLVMQEGGVVNRVMTYQKL 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6494413 6499592 + Lag0021329.1 Lac7g0812 613713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0812 747 Pfam Protein phosphatase 2C 87 323 IPR001932 -
Lac7g0812 747 SUPERFAMILY PP2C-like 46 350 IPR036457 -
Lac7g0812 747 ProSiteProfiles PPM-type phosphatase domain profile. 58 348 IPR001932 -
Lac7g0812 747 ProSitePatterns PPM-type phosphatase domain signature. 94 102 IPR000222 GO:0043169(InterPro)
Lac7g0812 747 SMART PP2C_4 54 346 IPR001932 -
Lac7g0812 747 Gene3D - 48 350 IPR036457 -
Lac7g0812 747 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 53 350 - -
Lac7g0812 747 CDD PP2Cc 66 348 IPR001932 -
Lac7g0812 747 PANTHER PROTEIN PHOSPHATASE 59 347 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0935 Lac-Chr3:7555462 Lac7g0812 Lac-Chr7:6494413 1.40E-116 dispersed
Lac7g0812 Lac-Chr7:6494413 Lac9g2142 Lac-Chr9:40949550 1.80E-22 dispersed
Lac13g0521 Lac-Chr13:3824224 Lac7g0812 Lac-Chr7:6494413 3.20E-11 transposed
Lac3g0450 Lac-Chr3:3427757 Lac7g0812 Lac-Chr7:6494413 2.10E-09 transposed
Lac3g2933 Lac-Chr3:46773876 Lac7g0812 Lac-Chr7:6494413 1.10E-11 transposed
Lac12g2352 Lac-Chr12:40678509 Lac7g0812 Lac-Chr7:6494413 1.40E-155 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0812 - - - 0.0