Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0849 ATGGCCACCCGAAATTCTGAACCCAGGAAGCCAGAAACAGGAAGGGGAGAGTATGATTTGATGGAAATTTGGAGATGGTTGATTATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCCGATGAGGACGGTAATGGCGTAAAGGAAGCTACTAAGAAGGATTCAGCTAAGGATGGCTCCACCGCTCAGTCTCACCATGTCAGCAGAGGCTCTGGCTTGCTTGAACTGTGGCAATTTTGCTCGTTCGTTGAGTTTTCGTTGTTGTTGATAGATAAATCGAAGTCACGGAGTGTATCTGATGCTAAGAAGGAACCAACGGTTCAAAAGGATGGAACGACAGCACATATTGCAGCCCAAACATTTACATTTCGGGAGCTTGCTACAGCTACAAAGAACTTTAGACCAGAATGCTTACTGGGAGAAGGGGGGTTTGGAAGGGTTTATAAAGGTCGCTTGGAAAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAATCGGGAATTTTTGGTGGAGGTTTTAATGCTTAGCCTGTTACATCACCCAAATCTTGTTAACTTGATAGGCTATTGTGCTGATGGGGATCAACGTCTTCTTGTTTATGAATTCATGCCATTGGGGTCGTTGGAAGATCATTTGCATGATCTTCCACCAGATAAGGAGCCCTTGGATTGGAATACTAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCATGATAAAGCGAACCCCCCTGTCATATATCGAGACTTGAAGTCGTCTAATATTCTTCTTGATGAGGGCTACCACCCCAAGCTTTCAGATTTTGGTCTTGCAAAACTGGGTCCAGTTGGTGATAAGACTCATGTCTCAACGAGAGTAATGGGAACATATGGTTATTGTGCTCCAGAGTATGCTATGACTGGTCAACTCACTCTCAAGTCAGATGTATATAGTTTTGGAGTTGTCTTTCTAGAACTTATCACAGGGCGCAAGGCGATCGATAATACCAGAGGTCCGGGGGAGCATAATCTTGTAGCATGGGCTCGGCCACTTTTTAAAGACCGCCGGAAGTTCCCTAAGATGGCTGATCCGCTGCTGCAAGGCCGTTATCCCATGCGGGGACTTTATCAGGCATTGGCAGTTGCAGCAATGTGCTTGCAGGAACAGGCTGCTACAAGACCTCTAATCGGGGACGTTGTTACTGCTTTGACATATTTAGCTTCGCAAACTTATGATCCTAATACAGCTGCTTCTCAAAGCAATCGAATGAGTGGATCTACTCCACGAGCCCGAGATGAGCGGAGAGGTTTACCAGAAGGACTGGATAGCCCTGATGAGCGTGGTCGTGGACGTGGTTCCCCATCGAACTACAGAAACTCGCCTGATTACCGAAAGAAAGATCTCCATAGGGAATTGAATTGTGGAGGTACAGAACTGAGCAAAATTGACACTGGAGGTGGGTCCGGTCGAAAATGGGGATTGGATGAGTTAGAACGACAAGAATCTCTGCGAGACAGTCCTGTATATACTGGGAGAGCAAGGGAAACACCAAGGAACCGCGACTTAAACAGAGAACGTGCAGTTGCAGAAGCAAAAGTGTGGGGTGAAAACTGGAGAGATAGAAAGCGGGCGAATGCGCAAGGCAGCTTTGACGGTTCACAAGAATGA 1677 46.57 MATRNSEPRKPETGRGEYDLMEIWRWLIMGGCFPCFGSSDEDGNGVKEATKKDSAKDGSTAQSHHVSRGSGLLELWQFCSFVEFSLLLIDKSKSRSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNTAASQSNRMSGSTPRARDERRGLPEGLDSPDERGRGRGSPSNYRNSPDYRKKDLHRELNCGGTELSKIDTGGGSGRKWGLDELERQESLRDSPVYTGRARETPRNRDLNRERAVAEAKVWGENWRDRKRANAQGSFDGSQE 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6877120 6881364 - Lag0021366.1 Lac7g0849 613750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0849 558 SUPERFAMILY Protein kinase-like (PK-like) 118 418 IPR011009 -
Lac7g0849 558 Gene3D Transferase(Phosphotransferase) domain 1 209 430 - -
Lac7g0849 558 FunFam Serine/threonine-protein kinase PBS1 105 208 - -
Lac7g0849 558 MobiDBLite consensus disorder prediction 44 63 - -
Lac7g0849 558 ProSiteProfiles Protein kinase domain profile. 132 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0849 558 MobiDBLite consensus disorder prediction 463 479 - -
Lac7g0849 558 FunFam Serine/threonine-protein kinase PBS1 209 424 - -
Lac7g0849 558 CDD STKc_IRAK 138 407 - -
Lac7g0849 558 MobiDBLite consensus disorder prediction 417 527 - -
Lac7g0849 558 Pfam Protein kinase domain 137 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0849 558 SMART serkin_6 132 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g0849 558 Gene3D Phosphorylase Kinase; domain 1 102 208 - -
Lac7g0849 558 PANTHER OS07G0668900 PROTEIN 93 426 - -
Lac7g0849 558 MobiDBLite consensus disorder prediction 44 59 - -
Lac7g0849 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g0849 558 MobiDBLite consensus disorder prediction 430 455 - -
Lac7g0849 558 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0874 Lac-Chr13:7114556 Lac7g0849 Lac-Chr7:6877120 5.00E-83 dispersed
Lac13g0875 Lac-Chr13:7117690 Lac7g0849 Lac-Chr7:6877120 4.70E-51 dispersed
Lac2g0081 Lac-Chr2:571877 Lac7g0849 Lac-Chr7:6877120 1.30E-128 dispersed
Lac4g2007 Lac-Chr4:39594202 Lac7g0849 Lac-Chr7:6877120 5.60E-136 dispersed
Lac4g2132 Lac-Chr4:40926327 Lac7g0849 Lac-Chr7:6877120 5.20E-185 dispersed
Lac4g2984 Lac-Chr4:48097144 Lac7g0849 Lac-Chr7:6877120 2.60E-84 dispersed
Lac5g1402 Lac-Chr5:28145867 Lac7g0849 Lac-Chr7:6877120 2.90E-136 dispersed
Lac6g0091 Lac-Chr6:781329 Lac7g0849 Lac-Chr7:6877120 1.70E-133 dispersed
Lac7g0849 Lac-Chr7:6877120 Lac7g2600 Lac-Chr7:44399152 4.20E-141 dispersed
Lac7g0849 Lac-Chr7:6877120 Lac10g3058 Lac-Chr10:45061822 3.10E-152 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86328 PF00069 Pkinase 1.20E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0849 - - - 0.0