Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0877 ATGCTTCAAGAAGCTTCAACAAAACCTGAGGGAGAACTTGAAGTTAGCTTTGGTTATAAATGCAATGTTAACATAGATGGCATTCATGGGGTTTCTGACAAGTTCGAGATCCAGCCTGGACTTCGAAGGATCAGCAGTTTCTCTTGCTTATCTGGGGCTGCCTTGAGTGCAAATGCCACCCTAGCAAACACAAATATATGCAATGGTTTGATAGGAGAAGAAATACTTCCGACCTGGGACTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCACCTACTCTTTCAAGGTTGGATATATTGTCAACGTCTCTGCAGAGTAGTCTATCAAACTTAAGTTGCAGTCCATCTACCCCAACATCTGAATACGATTCATACTTGTTGAAATCCATGAGTGCTCCTTCCGGAAATGAAGGTTTTCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCTGGTGAGGACAGGGTCCAAGCTGTTTGTTCTGAAGAAAATGGATGGTTATATTGTGCAATTTATGACGGCTTTAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACTTTGTATGAAACGATCGTATTTTATTTTAACCTACTAGATTGGGAAGCTAGGAATGAAACCTCTGAGGGTTCGGACATGGATAATTCACATCTTCTTGATAATAGTAGCATTACTCCGGGTAGATTTTCTCCTTTGAGAAACAATTGGAAAAATGCTTCAGATATGAACAATACATTCGAGAACCATTCACATAGCAAAGCAGGAATGGCAAACTATCCTCTAAGGCATGAGGTGCTTGATAGCCTCCAGCGTGCTCTTAGTCAAACAGAGAATGACTTTCTGCACATGGTTGAACAGGAAATGGAGGATCGTCCTGATTTGGTTTCTGTTGGATCTTGTGTTTTAGTTGTTCTTCTTCATGGAAAGGATTTGTATACGCTAAATTTAGGTGATAGTAGAGCAGTACTAGCTACCCTTAATGAAGGTGCTAGGAGAGGGAATGGGGGACTGAAAGCCATCCAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAAAGAGCACAGTTACAACATGATCATCCTGATGATCCCACAATCATTGTTGGTGGAAAAGTCAAAGGAAAACTGAAGGTGACTCGTGCTTTTGGAGTTGGCTACTTGAAGACGAAAAAGTTTAATGATGCTTTGATGGGTATTCTTCAAGTTCGTAACCTAATAAGCCCTCCCTATATTTCCACCCAACCGGCATTGTCTGTCCATAGGATTTCAAAATCAGATTGCTTTGTTATAGTTGGCAGTGATGGTTTATTTGACTTTTTTGGCAATGACGAGGCAGTGAGCCTTGTCCATTCATATATCTTGAGCAATCCAACTGGAGATCCTGCAAAATTTTTACTGGAGCAGCTCTTATTGAAAGCAGCTAATTGCGCAGGTTTTAGCAAGGAAGAATTAATTACCATTCCAGCGGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAATCATCGCACCACAAGGGCATCTACTAGCATGTAA 1566 41.38 MLQEASTKPEGELEVSFGYKCNVNIDGIHGVSDKFEIQPGLRRISSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPTLSRLDILSTSLQSSLSNLSCSPSTPTSEYDSYLLKSMSAPSGNEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLYCAIYDGFNGRDAADFLAGTLYETIVFYFNLLDWEARNETSEGSDMDNSHLLDNSSITPGRFSPLRNNWKNASDMNNTFENHSHSKAGMANYPLRHEVLDSLQRALSQTENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLNEGARRGNGGLKAIQLTESHTVDNELERAQLQHDHPDDPTIIVGGKVKGKLKVTRAFGVGYLKTKKFNDALMGILQVRNLISPPYISTQPALSVHRISKSDCFVIVGSDGLFDFFGNDEAVSLVHSYILSNPTGDPAKFLLEQLLLKAANCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNHRTTRASTSM 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7201844 7205119 - Lag0021394.1 Lac7g0877 613778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0877 521 PANTHER PROTEIN PHOSPHATASE 2C 148 506 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Lac7g0877 521 SMART PP2C_4 130 506 IPR001932 -
Lac7g0877 521 Pfam Protein phosphatase 2C 270 459 IPR001932 -
Lac7g0877 521 CDD PP2Cc 152 508 IPR001932 -
Lac7g0877 521 Gene3D - 119 517 IPR036457 -
Lac7g0877 521 ProSiteProfiles PPM-type phosphatase domain profile. 139 508 IPR001932 -
Lac7g0877 521 SUPERFAMILY PP2C-like 153 509 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0280 Lac-Chr5:2730965 Lac7g0877 Lac-Chr7:7201844 1.40E-56 dispersed
Lac7g0877 Lac-Chr7:7201844 Lac9g2475 Lac-Chr9:43607935 1.50E-60 dispersed
Lac7g0877 Lac-Chr7:7201844 Lac1g2045 Lac-Chr1:41990204 1.60E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0877 - - - 0.0