Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g0905 | ATGGCAGATGGAGGAAAGAACAAGAAGGCTGCCCTCATCCGCGTGTCTTCATTGTTTCTTGTTACCATGGTAGTTGCAGTGGCGGTGGCTGACAACCCCAAAGGCGGTGGCGCCACCGCGGAGACCTCCAACACCACTAAATCTGTTAGAGCTGTTTGTCAGTCCACTGATTACCAAGAAACTTGCGAGAACGCACTCGCGGAGGCCGGAAAAAACACGAGCGACCCACGTGTACTAATCAAGGCAGGATTCCACGCTGCTGTTGAACAAATCAGATCGGCCATTGGAAATTCAACCCTCTTGAAAGAATCTGCCAAAGATCCCATGGCCAAGCTAGCACTCGAAGATTGCGGTGAACTCATGGATTATGCAATCGACGATCTTGTAACTTCGTTCGACAGGGTCACCGATAATTTCGATTTCAGCAAACTGAATGAATACATCGAGGATCTCAAGATCTGGCTAAGTGGGGCATTAACGTATCAAGAAACTTGTTTGGATGGATTTGAGAATGTTACTGGTGATACAGGGGAAAAGATGCAGAATTTGTTGAAGACGTCAAGAGAATTGACAATCAATGGGCTTGATATGGTGAGTGAGATCTCGTCCGTTTTGACCTCTTTATGGCTTCCGATGGCTGGACGACGACTGTTGACAGAAGAGGAATCCAATGAACGACTGCTGACAGAGGACGAGCCATCATGGGTCAGTGACAGAAGGGGGCTACTCCAAGCCACTCCAGCCAACATCAAAGCAGACGTTGTGGTGGCTATAGATGGAAGTGGCAAGTACAAAACAGTGAGTGAAGCTCTAAAGGATGTCCCAAAGAACAGCAATAAAACCTTTGTCATTTATATTAAGGCCGGAGTTTATCAAGAGCAAGTGATGGTCGACAAGACCATGACCTATGTCATGATGATTGGAGATGGCCCGACTAAGACGAAGATCACTGCATCCAAGAACTTCGTCGACGGAACACCCAGATTCAAAACCGCTACTGTTTCGGTGATGGGGACCAACTTCATCGCCAAAGACATAGGATTCGAGAACTCTGCGGGAGCAGCGAAGCGCCAAGCAGCAGCACTCCAAGTCCAATCTGACATGTCCATCTTCTACAATTGTCAAATGGATGGTTACCAAGACACTCTCTACACTCACGTCCACCGCCAATTCTACCGAGATTGCACCATCACCGGCACCATCGACTTCATCTTTGGCAACGCGGCTGTTGTGTTCCAAAATTGCAAGATCTTAGTGAGGAAGCCAATGGATGATCAACAATGCATCATTACTGCCCAAGGTCGAACCCAACCAAAAGAGCCCACTGCCATCATCCTTCAGAATTGTGTCATCTCCTCCGCTCCTGATTTCTTCCCCGTCCGTCACATCAACAAGGCCTACCTTGGACGCCCATGGAAGGAATATTCAAGAACCATCATTATGCAGTCCCAAATCGACGACTTGATTCAGCCTGAAGGATGGCTTCCATGGCAAGGTGATTTTGCTCTGAAAACTCTGTTTTACTCCGAGTTCAATAATAGGGGACCTGGTGCCGCCAAGGACAAACGAGTTAAGTGGAGGGGAATCAAGCAAATCACAGCACAGCACGCCGTTGATTTCACCGTCGGGAGGTTTATTAATGGTGATCACTGGATCAAGCCCACCGGAGTGCCATACACTTCCGACATGATGGCAGTGTAA | 1701 | 48.15 | MADGGKNKKAALIRVSSLFLVTMVVAVAVADNPKGGGATAETSNTTKSVRAVCQSTDYQETCENALAEAGKNTSDPRVLIKAGFHAAVEQIRSAIGNSTLLKESAKDPMAKLALEDCGELMDYAIDDLVTSFDRVTDNFDFSKLNEYIEDLKIWLSGALTYQETCLDGFENVTGDTGEKMQNLLKTSRELTINGLDMVSEISSVLTSLWLPMAGRRLLTEEESNERLLTEDEPSWVSDRRGLLQATPANIKADVVVAIDGSGKYKTVSEALKDVPKNSNKTFVIYIKAGVYQEQVMVDKTMTYVMMIGDGPTKTKITASKNFVDGTPRFKTATVSVMGTNFIAKDIGFENSAGAAKRQAAALQVQSDMSIFYNCQMDGYQDTLYTHVHRQFYRDCTITGTIDFIFGNAAVVFQNCKILVRKPMDDQQCIITAQGRTQPKEPTAIILQNCVISSAPDFFPVRHINKAYLGRPWKEYSRTIIMQSQIDDLIQPEGWLPWQGDFALKTLFYSEFNNRGPGAAKDKRVKWRGIKQITAQHAVDFTVGRFINGDHWIKPTGVPYTSDMMAV | 566 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7568420 | 7570120 | - | Lag0021422.1 | Lac7g0905 | 613806 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g0905 | 566 | Gene3D | - | 247 | 563 | IPR012334 | - | |
Lac7g0905 | 566 | NCBIfam | pectinesterase inhibitor domain | 19 | 185 | IPR006501 | GO:0004857(InterPro) | |
Lac7g0905 | 566 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 47 | 201 | IPR035513 | - | |
Lac7g0905 | 566 | SMART | PMEI_2 | 44 | 197 | IPR006501 | GO:0004857(InterPro) | |
Lac7g0905 | 566 | ProSitePatterns | Pectinesterase signature 1. | 278 | 297 | IPR018040 | - | |
Lac7g0905 | 566 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 43 | 202 | IPR035513 | - | |
Lac7g0905 | 566 | Pfam | Plant invertase/pectin methylesterase inhibitor | 48 | 197 | IPR006501 | GO:0004857(InterPro) | |
Lac7g0905 | 566 | CDD | PMEI-like_3 | 51 | 203 | - | - | |
Lac7g0905 | 566 | Pfam | Pectinesterase | 253 | 549 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Lac7g0905 | 566 | FunFam | Pectinesterase | 45 | 202 | - | - | |
Lac7g0905 | 566 | FunFam | Pectinesterase | 247 | 563 | - | - | |
Lac7g0905 | 566 | PANTHER | PECTINESTERASE | 9 | 554 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Lac7g0905 | 566 | SUPERFAMILY | Pectin lyase-like | 250 | 561 | IPR011050 | - | |
Lac7g0905 | 566 | ProSitePatterns | Pectinesterase signature 2. | 397 | 406 | IPR033131 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0857 | Lac-Chr11:9235100 | Lac7g0905 | Lac-Chr7:7568420 | 1.60E-196 | dispersed | |
Lac11g0858 | Lac-Chr11:9241488 | Lac7g0905 | Lac-Chr7:7568420 | 2.60E-202 | dispersed | |
Lac3g2866 | Lac-Chr3:45706899 | Lac7g0905 | Lac-Chr7:7568420 | 5.40E-176 | dispersed | |
Lac7g0905 | Lac-Chr7:7568420 | Lac8g2163 | Lac-Chr8:39965811 | 5.60E-117 | dispersed | |
Lac7g0905 | Lac-Chr7:7568420 | Lac7g0908 | Lac-Chr7:7581233 | 8.60E-243 | proximal | |
Lac10g1173 | Lac-Chr10:9941960 | Lac7g0905 | Lac-Chr7:7568420 | 3.20E-112 | transposed | |
Lac12g2053 | Lac-Chr12:37630899 | Lac7g0905 | Lac-Chr7:7568420 | 4.30E-16 | transposed | |
Lac7g0905 | Lac-Chr7:7568420 | Lac8g1608 | Lac-Chr8:33949093 | 1.40E-11 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g0905 | K01051 | - | csv:101212686 | 917.531 |