Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0970 ATGGCGTCGTCTCTGATTCTGAATCCCGTGGCGAGTTCCGAGCGATCGCGTGATTCGTCCAGAAAGAAAAAGAAGAAGAAAGCGGCGAGGGAAGATGATCGTCAAGATCAGGATCGTATCAAGTGGAAATCACAAGCGCAGCATCAAGTTTACTCTTCGAAGCTGTGGCGCGCCTTGAGACAGGTCAGGATCAGTCCTCCTTCTTCCCTGTCGGCACCGAACGAGACCCCGCGCCGCGGCCGAGCCGTGCGGGAGGCGGCTGATACGGTTCTGGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTGAAGCTCAAGTTTCGAAAGCACAATCGGCAGAAGGCGCGTGCGAGTGGAAACAGCCGAACGAAGAAGCCGAGAGTCAGCGTTTTGCGGTTGAGAGGGAAGGGATTACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCCGGAAGCAACCGCTGCCGGTGATTCTGGATGAAGCAACCGATTACATACCCGCACTGGAGATGCAGATCCGAGTCATGAGCGCCATATTCAACTTGATTTCAAGCTCATCTTCTTCATCTGGTATCGATTCTTCTATCTCCCCACCTTCTACCTGA 642 54.52 MASSLILNPVASSERSRDSSRKKKKKKAAREDDRQDQDRIKWKSQAQHQVYSSKLWRALRQVRISPPSSLSAPNETPRRGRAVREAADTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKARASGNSRTKKPRVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEATDYIPALEMQIRVMSAIFNLISSSSSSSGIDSSISPPST 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8240581 8241222 + Lag0021487.1 Lac7g0970 613871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0970 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 194 IPR036638 GO:0046983(InterPro)
Lac7g0970 213 MobiDBLite consensus disorder prediction 25 43 - -
Lac7g0970 213 MobiDBLite consensus disorder prediction 1 47 - -
Lac7g0970 213 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 195 IPR044660 GO:0006355(InterPro)
Lac7g0970 213 CDD bHLH_AtIBH1_like 137 191 IPR044549 GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g3025 Lac-Chr3:48374829 Lac7g0970 Lac-Chr7:8240581 4.10E-33 dispersed
Lac7g0970 Lac-Chr7:8240581 Lac11g0971 Lac-Chr11:10690553 7.40E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0970 - - - 0.0