Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g0975 ATGGAGAAGAAATTTGAAAACTCATTGATGGGTTCTGAAAATTCCGCCGGATTTTACTCTCCGGCGCTGTTCTCCGACGAATTTCCGGCCACTGGGTTTGGTTTTTCCGGTATGTTCGACATGGACGATGATCATAAAGCTTCTTGTTCTTCGAATTCCTTTGAAATTGGAATCCACGATCTTTATAATCCTTCTTCTTTATTCGATTTGCTTTCCACGGCGGCGCCACCGCTGCAGCCGCCGCTTTCCTCGCCGGCCTCCACCGTGCCCGAGTCGTCCGAGGTGCTTAATGCTCCGGCGACGCCGAATTCTTCGTCGGTTTCGAATTCCTCCTCCAATGAAGCTGCGGCCATTGAAGAGGTCGACAAGATCAACAACAACACTGACAGGACTTCTAAAGTGTTGAAGCCAAAGAAGAAGAACCAGAAGAAGCAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTACCGGTGGAGGAAGTATGGCCAAAAGGCCGTGAAGAACAGTCCTTATCCCAGAAGCTATTATCGTTGCACTACGGCAGGGTGTGGTGTGAAGAAGAGGGTGGAGCGGTCATCCGGCGACCATTCGATCGTCATCACGACGTACGAAGGTCAACACACCCACCAAAGTCCGGTGATGCCCCGAGGAAGCATCCGAGTCCTACCGGAATCCACCAACTGCCCCGTCGCCAATCACGACACCGCCACCCCCGGTCTCCTATTCCAACACAACACTCCCCAACCCTTCATGTATAGCCCTCCGCCGCCATTTCTAACGATCGAATCGTCGTCGGTGAGTCTCCATCCTCCATCACCCCTCCCACCGCCGTCGTCTCGAGATTCGTTGCTTCGAGACCATGGACTTCTGCAGGACTTGGTGCCATTGCAAATGAGGAAGGAACCAAAAGATGAGCAAAATGGATGA 954 51.78 MEKKFENSLMGSENSAGFYSPALFSDEFPATGFGFSGMFDMDDDHKASCSSNSFEIGIHDLYNPSSLFDLLSTAAPPLQPPLSSPASTVPESSEVLNAPATPNSSSVSNSSSNEAAAIEEVDKINNNTDRTSKVLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSGDHSIVITTYEGQHTHQSPVMPRGSIRVLPESTNCPVANHDTATPGLLFQHNTPQPFMYSPPPPFLTIESSSVSLHPPSPLPPPSSRDSLLRDHGLLQDLVPLQMRKEPKDEQNG 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8283134 8284586 + Lag0021492.1 Lac7g0975 613876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g0975 317 FunFam WRKY transcription factor 57 147 221 - -
Lac7g0975 317 MobiDBLite consensus disorder prediction 79 148 - -
Lac7g0975 317 MobiDBLite consensus disorder prediction 85 116 - -
Lac7g0975 317 SUPERFAMILY WRKY DNA-binding domain 153 221 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac7g0975 317 ProSiteProfiles WRKY domain profile. 156 221 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac7g0975 317 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 231 IPR044810 GO:0003700(InterPro)
Lac7g0975 317 SMART WRKY_cls 161 220 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac7g0975 317 Gene3D WRKY domain 145 222 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac7g0975 317 MobiDBLite consensus disorder prediction 271 317 - -
Lac7g0975 317 Pfam WRKY DNA -binding domain 162 219 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0974 Lac-Chr11:10736993 Lac7g0975 Lac-Chr7:8283134 1.70E-56 dispersed
Lac6g0787 Lac-Chr6:6741464 Lac7g0975 Lac-Chr7:8283134 3.70E-35 dispersed
Lac7g0975 Lac-Chr7:8283134 Lac9g2256 Lac-Chr9:41926862 4.10E-32 dispersed
Lac7g0975 Lac-Chr7:8283134 Lac4g2544 Lac-Chr4:44646611 6.50E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24171 PF03106 WRKY 9.10E-26 CL0274 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g0975 - - - 0.0