Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g1197 ATGGCTTTCCTTTCACTTCTCGCCATTTCCCTTCTGGGATCCATGGCTTTTCTTCTTCACAATTGCATTGCGCTCGATGGCCTTTCCCCTCAGCTCAACGACGACATACTCGGTTTGATCGTCTTCAAGTCCGACCTCCACGACCCATCTTCCTTTCTCGCCTCCTGGAATGAAGACGACGATTCCCCTTGTTCTTGGAGCTTCGTCAAATGCAACCCCATCAATGGCAGAGTTTCCGAGGTTTCCATCGATGGCTTGGGCTTGTCTGGCAGAATCGGAAGGGGGCTTGAGAAGTTGCAGCATCTCAAGGTATTGTCCCTTTCCGGCAATAACTTCACTGGCACTCTCAGTCCTGAGCTTGCTCTTCCCTCGAGTCTCGAGAGAGTTAATTTCAGTCGCAATGCTCTCTCTGGCCGAATCCCCACCTCTCTAATCGATATGTCGTCCGTTAGATTTCTTGATTTCTCTGATAATCTCTTCTCTGGGCCTCTTCCTGATAATTTGTTTCTCAATTGCTCTTCGCTTCATTATCTCTCTCTTGCGTCTAATATGCTTGAAGGCCCTGTCCCCAACACATTGCCCACAAGGTGTTTGTATTTAAACACTCTGAATCTTTCGAGCAATCGGTTCTCTGGTAGCTTGGATTTTGCACCTGGGCTTTGGTCTTTGACAAGGCTCAGGACATTGGATCTCTCAAACAATGCCCTCTCCGGATATCTCCCACAAGGGATTTCCGCCATTCATAACCTGAAAGAGCTCAAGTTGCAGAGCAACCAGTTCTCAGGGCCATTGCCAGCAGATTTGGGATTGTGCCTCCACTTGGCCACACTGGACGTCAGCCGCAACCGCCTCGCCGGGCCGCTACCGGAGTCGACGAAACACTTGACATCGCTGACAGTCCTCAACATAGGATTCAACACGTTTTCCGGGGAGTTACCGCAGTGGATTGGGAACATGACGAGTTTGGAGTATGTGGATTTCTCAAGCAACGGGTTCATGGGCAGGCTTCCATTGGCAATGGGGGGGTTGAGATCTGTGAAGTACATGAGTTTCTCAAACAACAAGCTGTCTGGGAGCATCCCAGAGACATTGAAGGAGTGCACAGAGCTGCGTGTGATGAAGCTGGAAGGGAATGGCCTCAATGGCGAGGTGCCAGAGGGGTTGTTCGAACTGGGATTGGAGGAGGTGGATTTGTCGAAGAATGAGCTGATGGGTTCGATCCCGGCAGGATCGAGCAGGCTGTACGAGAGGCTAAGGAGGATGGACCTGTCGAGGAACAGATTAGAAGGGAACTTTCCAGCGGAAATGGGATTGTACAGGAATTTGAAGTACTTGAATCTGTCGTGGAACAAGTTCAAGGCGAAGATTCCACCAGAAATGGGGATGTTTGAGAAGCTGAGTGTGTTGGACATTAGAAGCAGTGAGTTGCATGGATCAATCCCAGGAGAGTTGTGTGATTCTGGGAGTTTGGGGATTCTTCAGCTCGATGGAAACTCGTTGATTGGTCCAATTCCAGATGAGATTGGAAACTGTGTCTCTCTTTACTTGCTGAGCTTATCCCACAACAATCTAAGTGGAGCAATTCCAAAGTCAATCTCCAAGCTAAGCAAGCTAGAGATTCTAAGGCTTGAATCAAATGAACTGAGTGGAGAAATACCCCAAGAGCTTGGAATGCTTCAAAACCTCCTTGCTGTTAACATTTCATACAATATGCTGACAGGGAGGCTCCCTGTTGGTGGCATTTTTCCAAGCTTGGATCAAAGTGCTTTGCAAGGAAACTTAGGCCTCTGCTCCCCTTTGCTCAAAGGCCCTTGCAAAATGAATGTCCCTAAGCCCCTTGTTCTTGACCCCAATGCCTATCCCAACAACCAAATGGGGGGATCATCAGGCCAAACCACCAGAAACAGGCCTTCATACTCTAATCCTTCTTCCCATCATCATGTCTTCTTCAGTGTCTCTGCCATTGTTGCCATCTCTGCTGCCACTTTGATTGCCATTGGGGTCCTTGTCATTACCTTGCTCAATGTCTCTGCTCGCAGGCGATCGCTTGCCTTTGTCGACAATGCCTTGGAAAGCATGTGCTCCAGTTCTTCGAAATCGGGCACTGTGACTGCAGGTAAGCTCATCTTGTTTGATTCCAACTCCTCCAGGGCCTCCCCGAATTGGGTTAGCAACCATGAAGCCTTGCTCAACAAGGCCTCTGAGATCGGTGCCGGAGTTTTCGGTACGGTTTATAAGGTTTCCTTGGGAGATCAAGGAGGAAGAAGAGATGTGGCTATCAAGAAGCTGGTGAAATCAAACATCATTCAAAACCCCGAAGATTTCGACCGCGAAATCCGAATCTTGGGGAAGGTCAAGCATCCGAATTTGATTGGCTTAAAGGGTTACTACTGGACTGCTCAAACTCAGCTCTTGCTTATGGAGTATGCCACCAATGGAAGTCTTCAAACTCAACTCCATGGAAGGCTTCCTTCAACTCCACCACTCTCTTGGGCAAACAGGTTCAAGATTGTGCTTGGGACAGCCAGAGGACTTGCACATTTACACCACTCATTCCGCCCTCCCATCGTTCACTACAATCTCAAGCCAAGCAACATCTTGCTCGACGAAAACTTCAACCCGAAGATCTCCGATTACGGGCTGGCAAGGCTGCTAACAAAGCTCGACAAACACGTCGTAAACAACAGATTCCAAAGTGCATTGGGGTACGTCGCACCAGAACTGGCATGCCAGAGCATAAGGGTGAACGAGAAATGCGACGTACACGGATTCGGGGTGATGATTCTGGAGATCGTGACGGGACGAAGGCCGGTGGAGTATGGAGAAGACAATGTGGTAATATTGACAGACCATGTGAGGTATTTGCTTGAGAGGGGGAATGTGTTGGATTGTGTAGATCCAAGCATGAGTGAATATTCAGAAGATGAAGTGGTGCCAATTCTGAAACTGGCTTTGGTATGCACTTCTCAAATTCCTTCAAGCAGGCCTTCAATGTCAGAAGTGGTGCAGATTCTGCAAGTCATAAAGGCTCCACTTCCTCAAAGAATAGAAGCATTTTGA 3060 48.56 MAFLSLLAISLLGSMAFLLHNCIALDGLSPQLNDDILGLIVFKSDLHDPSSFLASWNEDDDSPCSWSFVKCNPINGRVSEVSIDGLGLSGRIGRGLEKLQHLKVLSLSGNNFTGTLSPELALPSSLERVNFSRNALSGRIPTSLIDMSSVRFLDFSDNLFSGPLPDNLFLNCSSLHYLSLASNMLEGPVPNTLPTRCLYLNTLNLSSNRFSGSLDFAPGLWSLTRLRTLDLSNNALSGYLPQGISAIHNLKELKLQSNQFSGPLPADLGLCLHLATLDVSRNRLAGPLPESTKHLTSLTVLNIGFNTFSGELPQWIGNMTSLEYVDFSSNGFMGRLPLAMGGLRSVKYMSFSNNKLSGSIPETLKECTELRVMKLEGNGLNGEVPEGLFELGLEEVDLSKNELMGSIPAGSSRLYERLRRMDLSRNRLEGNFPAEMGLYRNLKYLNLSWNKFKAKIPPEMGMFEKLSVLDIRSSELHGSIPGELCDSGSLGILQLDGNSLIGPIPDEIGNCVSLYLLSLSHNNLSGAIPKSISKLSKLEILRLESNELSGEIPQELGMLQNLLAVNISYNMLTGRLPVGGIFPSLDQSALQGNLGLCSPLLKGPCKMNVPKPLVLDPNAYPNNQMGGSSGQTTRNRPSYSNPSSHHHVFFSVSAIVAISAATLIAIGVLVITLLNVSARRRSLAFVDNALESMCSSSSKSGTVTAGKLILFDSNSSRASPNWVSNHEALLNKASEIGAGVFGTVYKVSLGDQGGRRDVAIKKLVKSNIIQNPEDFDREIRILGKVKHPNLIGLKGYYWTAQTQLLLMEYATNGSLQTQLHGRLPSTPPLSWANRFKIVLGTARGLAHLHHSFRPPIVHYNLKPSNILLDENFNPKISDYGLARLLTKLDKHVVNNRFQSALGYVAPELACQSIRVNEKCDVHGFGVMILEIVTGRRPVEYGEDNVVILTDHVRYLLERGNVLDCVDPSMSEYSEDEVVPILKLALVCTSQIPSSRPSMSEVVQILQVIKAPLPQRIEAF 1019
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11096345 11100690 + Lag0021714.1 Lac7g1197 614098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g1197 1019 ProSitePatterns Protein kinases ATP-binding region signature. 736 762 IPR017441 GO:0005524(InterPro)
Lac7g1197 1019 FunFam Inactive leucine-rich repeat receptor-like protein kinase 315 608 - -
Lac7g1197 1019 SUPERFAMILY L domain-like 318 587 - -
Lac7g1197 1019 PANTHER OS05G0588300 PROTEIN 339 459 IPR050994 -
Lac7g1197 1019 FunFam Leucine-rich repeat receptor-like protein kinase 32 191 - -
Lac7g1197 1019 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Lac7g1197 1019 Pfam Leucine Rich Repeat 225 245 IPR001611 GO:0005515(InterPro)
Lac7g1197 1019 Pfam Leucine Rich Repeat 441 461 IPR001611 GO:0005515(InterPro)
Lac7g1197 1019 Pfam Leucine Rich Repeat 513 535 IPR001611 GO:0005515(InterPro)
Lac7g1197 1019 Pfam Leucine Rich Repeat 346 366 IPR001611 GO:0005515(InterPro)
Lac7g1197 1019 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515(InterPro)
Lac7g1197 1019 Pfam Leucine Rich Repeat 249 269 IPR001611 GO:0005515(InterPro)
Lac7g1197 1019 Pfam Leucine Rich Repeat 297 319 IPR001611 GO:0005515(InterPro)
Lac7g1197 1019 Pfam Leucine Rich Repeat 537 558 IPR001611 GO:0005515(InterPro)
Lac7g1197 1019 Pfam Protein kinase domain 732 1003 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g1197 1019 Gene3D Phosphorylase Kinase; domain 1 716 809 - -
Lac7g1197 1019 MobiDBLite consensus disorder prediction 621 640 - -
Lac7g1197 1019 SUPERFAMILY L domain-like 51 385 - -
Lac7g1197 1019 SMART LRR_typ_2 223 246 IPR003591 -
Lac7g1197 1019 SMART LRR_typ_2 147 171 IPR003591 -
Lac7g1197 1019 SMART LRR_typ_2 247 271 IPR003591 -
Lac7g1197 1019 SMART LRR_typ_2 535 559 IPR003591 -
Lac7g1197 1019 SMART LRR_typ_2 295 319 IPR003591 -
Lac7g1197 1019 SMART LRR_typ_2 99 123 IPR003591 -
Lac7g1197 1019 ProSiteProfiles Protein kinase domain profile. 730 1008 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g1197 1019 MobiDBLite consensus disorder prediction 618 640 - -
Lac7g1197 1019 FunFam Inactive leucine-rich repeat receptor-like protein kinase 216 314 - -
Lac7g1197 1019 Gene3D Transferase(Phosphotransferase) domain 1 810 1015 - -
Lac7g1197 1019 Gene3D Ribonuclease Inhibitor 271 340 IPR032675 -
Lac7g1197 1019 Gene3D Ribonuclease Inhibitor 198 270 IPR032675 -
Lac7g1197 1019 Gene3D Ribonuclease Inhibitor 33 197 IPR032675 -
Lac7g1197 1019 SUPERFAMILY Protein kinase-like (PK-like) 734 1013 IPR011009 -
Lac7g1197 1019 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 810 1014 - -
Lac7g1197 1019 Gene3D Ribonuclease Inhibitor 341 611 IPR032675 -
Lac7g1197 1019 CDD STKc_IRAK 736 1006 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1247 Lac-Chr13:11248380 Lac7g1197 Lac-Chr7:11096345 1.70E-22 dispersed
Lac5g0531 Lac-Chr5:6006762 Lac7g1197 Lac-Chr7:11096345 2.50E-87 dispersed
Lac7g1197 Lac-Chr7:11096345 Lac5g2914 Lac-Chr5:47292775 1.10E-49 dispersed
Lac7g1197 Lac-Chr7:11096345 Lac8g2839 Lac-Chr8:45589580 3.70E-26 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86333 PF00069 Pkinase 1.50E-41 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g1197 - - - 0.0