Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g1288 ATGGAGAAAACCCCACCCCCAGAAAAGTCCGAAAGTTTTTCAAAAAATTTCAATAGAAGGATTGCAAATTTGGGCTCACCTCGCCGGGTTCACGATGCCGCCGATGCTAAATCTGAAGCTGAGAAGCTTGCGGAAGATGAAGCCTTCATTGAAGACCCTCTTTCTGAATCTGAAACCGCATTGCTTTTCGAAGAGGTTGATCAATTCCTCCTCGCCTTGTCCAATGCCGGGGAGGATGGGTCCAATCTCAGCCCTGAAATTCCCAGCTCTGTTCATTCCCTCTCCAAAATGGTCGACTCCATGGTCTCCAGGTACAATTCTAGCAAGTATCCGGCCAAGCTCGGCAAAGATCCCGACTGGGATTCTTCCTTCTTCGAAGCTCTTCATCGCATTTCGAAGATTGCGATTAAATTAAGCGAATTCCCTTCCAGCCCTGCCTCGATTCCTTCCCTCAATCGGACCACCACGGCTCTGCAGCGAGCCATGTCGCTGTTGGACGAAGAATTCAACGCCCTTCTTAAAGAATGCAAACATCGAGAGTGTGATTCGAAATCTGACAAGAAAGCGTCGAAGCAGTCATCGTTCAAATCTGCCAACGAATCGCCAGATCAACATCACGGCACCCTTTCTGAATCATCCGATTCCGATTCTGCCAAGGAAGAGGAATTTCCCTCTTTCTCGCCGGAAACCGTATGGAACATGAAACGAATCGCCGGAACGATGATCTCCGCCGGCTACGAGAAGGAATGTTGCATGAGTTACAGCTTCCTCCGGCAGAGCTCGTTCAAAGGAATACTGAACAAGCTCGGGTACGAAAGTATTACCATAGACGACATTCAGAAAATGCACTGGGAGACTCTTCAATCGGAAGTCGACAAATGGATCGCCGTCGTCAAGAAATGCTCAAAATCTCTGTTCCCAGGCGAGTGGAAGCTCTGTGACTCTGTTTTCACCGATCATCCTTTCATTGCTCAAACGCTCTTCAGCAATTTAACAAGAGCAGTAGTCATCAAGCTTCTCAACTTCGCAAATGCCGTCGTTTTAACCAAGAGATCGGCCGAGAAGATGTTCAAATTACTCGACATGTACGAAACCATCCGCGACTTAATTCCAGCCATCAATGGCTTCCCTGAAAATTGCAGAACAGAGCTAATTTCAGAAGCGGAAGGGGCAAAACGCGGGATAGGCGAAGCAATCGTCGGCATTTTCTACGACCTGGAAAGCTCAATCAAAAGCGACAACGCAAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTAACACGCTACATTATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTCTTCCAGTTCCTGGACCCTAAAATCGACGAAGACCACCCGGCGAGAATGGACGAAAACGACGATGCATCGCCGAGAAAGTCTCAGCTCGCGATTCAGATCGCAATGGTGATGGATCTGCTGGACGCGAATCTCTCGATGAGATCGAAACTGTACCGAGACGCATCTCTTCGATACATCTTCCTGATGAACAACGGAAGGTACATAGTTCAGAAAATCAAAGGCTCCACTGGAATTACCGAATTGATGGGAGACCGATGGTGCCGCAAGCGATCGACGAATCTGCGACAGTACCACAAAAATTACCAGAGGGAAACCTGGAGTAAGGTGCTGCAGTGCCTGAGCCACGAAGGATTGCAGGTGAACGGGAAGGTGTCGAAGCCGATTCTGAAGGAGAGATTCAAAAGCTTCAACGCAATGTTCGACGAAATACACAAAACGCAGAGCAGTTGGGTGGTGAGCGACGAGCAGCTTCAGTCGGAGCTCCGGATTTCGGTGTCGGCGGTGATGATTCCGGCGTACCGTTCGTTCGTGGGGAGATTCAAGCAGCAATTCGATCCGGGAAGGCAATCGGAGAAGTACATAAAGTATCAGCCTGAAGATATTGAGGGTTTGATCGATGACCTGTTTGATGGAAACACTGCATCAATGGCGAGAAGGAGAATGTAG 2010 48.46 MEKTPPPEKSESFSKNFNRRIANLGSPRRVHDAADAKSEAEKLAEDEAFIEDPLSESETALLFEEVDQFLLALSNAGEDGSNLSPEIPSSVHSLSKMVDSMVSRYNSSKYPAKLGKDPDWDSSFFEALHRISKIAIKLSEFPSSPASIPSLNRTTTALQRAMSLLDEEFNALLKECKHRECDSKSDKKASKQSSFKSANESPDQHHGTLSESSDSDSAKEEEFPSFSPETVWNMKRIAGTMISAGYEKECCMSYSFLRQSSFKGILNKLGYESITIDDIQKMHWETLQSEVDKWIAVVKKCSKSLFPGEWKLCDSVFTDHPFIAQTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETIRDLIPAINGFPENCRTELISEAEGAKRGIGEAIVGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKIDEDHPARMDENDDASPRKSQLAIQIAMVMDLLDANLSMRSKLYRDASLRYIFLMNNGRYIVQKIKGSTGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLSHEGLQVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQQFDPGRQSEKYIKYQPEDIEGLIDDLFDGNTASMARRRM 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12358395 12360404 + Lag0021805.1 Lac7g1288 614189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g1288 669 Gene3D Exocyst complex component Exo70 106 667 - -
Lac7g1288 669 SUPERFAMILY Cullin repeat-like 120 658 IPR016159 -
Lac7g1288 669 Pfam Exo70 exocyst complex subunit C-terminal 293 655 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Lac7g1288 669 PANTHER EXOCYST COMPLEX PROTEIN EXO70 98 660 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Lac7g1288 669 MobiDBLite consensus disorder prediction 207 223 - -
Lac7g1288 669 Pfam Exocyst complex component Exo70 N-terminal 96 175 - -
Lac7g1288 669 MobiDBLite consensus disorder prediction 30 49 - -
Lac7g1288 669 MobiDBLite consensus disorder prediction 183 225 - -
Lac7g1288 669 MobiDBLite consensus disorder prediction 21 49 - -
Lac7g1288 669 FunFam Exocyst subunit Exo70 family protein 107 665 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g1288 Lac-Chr7:12358395 Lac8g1970 Lac-Chr8:38146116 7.00E-167 dispersed
Lac7g1288 Lac-Chr7:12358395 Lac3g0086 Lac-Chr3:577593 3.80E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g1288 K07195 - csv:101220402 1145.95