Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g1463 ATGGCTCAACTGCTTGCTGCTCACCAAAATGGTTCAGTGGAGAGCTTGTGCAGAAGCCATCAAGATCCACTGAACTGGGGTGTGGCGGCTGAGTCACTGAAGGGAAGTCATTTGGATGAAGTGAAGCGCATGGTGGAAGAGTATCGAAGGCCTGTGGTGAAGCTTGGAGGAGAAACTCTCACCATTTCCCAAGTCGCTGCTATTGCCACTCGTGATAATGATGTCGTAGTTGAATTGGCTGAGTCTGCGAGGGCTGGTGTCAAAGCCAGTAGTGATTGGGTGATGGACAGCATGAGTAAAGGCACTGATAGTTACGGTGTCACTACTGGCTTTGGTGCCACTTCCCATCGAAGAACCAATCAAGGTGGTGCTCTTCAGAAGGAGTTGATCCGATTCTTGAATTCTGGCATTTTTGGAAATGGAACTGAATCAAGTCACACTTTGCCTCACTCTGCTACACGAGCGGCCATGTTGGTGAGAATCAACACTCTCCTTCAAGGCTATTCGGGCATTAGATTCGAGATTTTAGAAGCCATTGCTAATCTCTTGAATCACAACGTCACTCCATGTTTGCCACTGCGAGGGACAATTACAGCTTCTGGGGATTTGGTTCCTTTGTCTTATATTGCTGGGCTACTCACTGGTCGTCATAATTCAAAAGCCATTGGACCTGATGGCAAAATACTTGATGCAGAAGCTGCTTTTGAACAAGCTGGTATTGGATCTGGCTTCTTTGAGTTGCAACCAAAAGAAGGTCTTGCTCTTGTCAATGGCACTGCTGTTGGTTCTGGATTGGCTTCTATTGTTCTATTCGAGGCAAATATTTTGGCTATTCTGTCTGAAATTCTATCTGCCATTTTTGCTGAGGTTATGCAAGGAAAGCCTGAATTCACCGACCATTTGACCCATAAGTTGAAGCACCACCCAGGTCAAATTGAAGCAGCTGCAATCATGGAGCACATTTTGGATGGAAGCTCCTATATGAAAACGGCCAAGAAATTGCATGAAATGGATCCCCTCCAAAAGCCCAAACAAGATCGTTATGCTCTTAGAACCTCTCCTCAATGGTTAAGGCCCTTGATTGAAGTGATTCGCTTCTCCACAAAGTCAATTGAGCGGGAGATTAATTCAGTCAATGACAACCCTTTGATCGATGTTTCAAGAAACAAGGCGTTGCATGGAGGCAACTTCCAAGGAACGCCAATTGGAGTTTCCATGGACAACACTCGTTTGGCCATTGCATCAATTGGGAAGCTCATGTTTGCTCAATTTTCAGAACTTGTCAATGATTTTTACAATAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAACCCAAGCTTGGATTATGGGTTCAAAGGTGCTGAGATTGCAATGGCTTCATACTGCTCTGAGCTTCAATATCTTGCGAATCCAGTGACAAGTCATGTCCAAAGTGCCGAACAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCTTCAAGGAAAACAGCTGAAGCCATCGATATTCTAAAGCTAATGTCTTCCACATTTTTAGTTGCTCTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAAAACTTGAAGAGCATGAAATTGAGGCAAGTCCTAGTTGAGCATGCACTTGAAAATGGTAATGGTGAAATGAACTCAAACACTTCAATCTTTCAAAAGATTGGTGTTTTTGAGGATGAACTAAAGAGAGTTCTACCAAAGGAGGTTGGAAATGTAAGGTTGGCATATGAGAGCGGAAACTCTAAAATTGAAAATCAGATTAAAGATTGCAGATCTTATCCACTATACAAATTTGTGAGAGAGGAGTCGGGAACAAGATTGCTTACCGGAGAAAAGGTGATATCTCCAGGAGAAGAGTGTGAGAAGGTATTCACAGCGTTGTGTCAAGGAAAGATGATTGACTCTATCTTCGAGTGCTTGAAGGAGTGGAATGGAGCTCCAATCCCTATTTGCTAA 1974 43.41 MAQLLAAHQNGSVESLCRSHQDPLNWGVAAESLKGSHLDEVKRMVEEYRRPVVKLGGETLTISQVAAIATRDNDVVVELAESARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNSGIFGNGTESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAIANLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAIGPDGKILDAEAAFEQAGIGSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAILSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLRPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSMKLRQVLVEHALENGNGEMNSNTSIFQKIGVFEDELKRVLPKEVGNVRLAYESGNSKIENQIKDCRSYPLYKFVREESGTRLLTGEKVISPGEECEKVFTALCQGKMIDSIFECLKEWNGAPIPIC 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15331944 15334086 - Lag0021980.1 Lac7g1463 614364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g1463 657 CDD PAL-HAL 58 523 IPR001106 -
Lac7g1463 657 FunFam Phenylalanine ammonia-lyase 13 259 - -
Lac7g1463 657 FunFam Phenylalanine ammonia-lyase 260 555 - -
Lac7g1463 657 Gene3D Fumarase/aspartase (Central domain) 260 657 - -
Lac7g1463 657 Pfam Aromatic amino acid lyase 60 535 IPR001106 -
Lac7g1463 657 PANTHER HISTIDINE AMMONIA-LYASE 532 657 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Lac7g1463 657 Gene3D - 13 259 IPR024083 -
Lac7g1463 657 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841(InterPro)
Lac7g1463 657 Gene3D - 529 591 IPR023144 -
Lac7g1463 657 NCBIfam phenylalanine ammonia-lyase 22 531 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Lac7g1463 657 SUPERFAMILY L-aspartase-like 22 657 IPR008948 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0289 Lac-Chr12:3216683 Lac7g1463 Lac-Chr7:15331944 1.70E-171 dispersed
Lac1g2145 Lac-Chr1:42868874 Lac7g1463 Lac-Chr7:15331944 5.20E-53 dispersed
Lac7g1463 Lac-Chr7:15331944 Lac7g1470 Lac-Chr7:15432577 0.00E+00 dispersed
Lac7g1463 Lac-Chr7:15331944 Lac7g1464 Lac-Chr7:15344884 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g1463 K10775 - csv:101204574 1160.98