Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g1465 ATGGCTCACCTAAATGGTTCGGTGGAGAGCTTGTGCACAAGCCATCAAGATCCACTGAATTGGGGTGTGGCGGCAGAGTCATTGAAGGGAAGTCATTTGGATGAGGTGAAGCGGATGGTGGAAGAGTATCGGAGGCCTGTGGTGAAGCTTGGAGGACAGACACTCACCATTTCCCAAGTCGCTGCTATTGCCACTTGTGATAATGATGTCGTGGTTGAATTAGCCGAGTCTGCGAGGGCTGGTGTTAAAGCCAGTAGTGATTGGGTGATGGAGAGCATGAGTAAAGGCACTGACAGTTATGGTGTCACTACTGGCTTCGGTGCCACTTCCCACAGAAGAACCAACCAAGGTGGAGCTCTTCAAAAGGAGCTAATTCGGTTCTTGAATTCTGGCATCTTTGGGAATGGGACTGAGTCCAGTCACACTTTGCCTCACTCTGCCACTAGAGCAGCCATGTTGGTGAGAATCAACACTCTCCTTCAAGGCTATTCGGGTATTAGATTTGAGATTTTGGAAGCCATTGTCAACCTCTTAAACCACAACGTTACCCCATGTTTGCCACTTCGAGGAACAATTACAGCTTCAGGGGATTTGGTTCCTTTGTCTTACATTGCTGGACTACTTACGGGTCGTCATAATGCAAAAGCCATTGGACCTAATGAAGGCCTAGCTCTTGTCAATGGCACTGCTGTTGGTTCTGGGTTATCTTCCATTGTTCTTTTTGAAGCAAATATCTTAGCTGTTTTGTCTGAAGTTTTATCTGCCATTTTTGCTGAGGTAATGCAAGGAAAGCCTGAATTCACCGACCATTTGACCCATAAGTTGAAACACCATCCTGGTCAGATTGAAGCAGCTGCAATCATGGAGCACATTTTAGATGGAAGCTCTTACATGAAAACCGCCAAGAAATTGCATGAAATCGATCCTCTCCAAAAGCCAAAACAAGATCGTTACGCACTTAGAACTTCTCCCCAATGGCTTGGTCCCTTGATTGAAGTGATTCGATTTTCCACGAAGTCAATTGAGCGGGAGATTAATTCAGTTAACGACAACCCTTTGATCGATGTTTCAAGAAATAAGGCATTGCATGGAGGCAACTTTCAAGGAACACCAATTGGAGTTTCTATGGACAACACTCGTTTGGCCATTGCCTCAATTGGAAAGCTCATGTTTGCCCAATTTTCAGAACTAGTCAATGATTTCTACAACAATGGTTTGCCTTCTAATCTTTCTGCAGGTCGAAACCCCAGCTTGGATTATGGGTTTAAAGGTACTGAGATTGCCATGGCATCATATTGTTCCGAGCTTCAATATCTTGCAAATCCGGTGACAAGTCATGTCCAGAGCGCCGAGCAACATAACCAAGATGTTAACTCTCTTGGTTTAATTTCTTCAAGAAAAACAGCTGAAGCCATCGACATTCTAAAACTCATATTTTGCGAGAAAGATCTGCTTAAAGTTGTTGACAGAGAATACACTTTTGCATACATCGATGATCCATGCAATGCTACGTACCCATTGATGCAGAAATTGTGGCAAGTCCTTGTTGAACATGCTTTGGAAAATGGCAATAATGAAGTGAACTCAAACACTTCAATCTTCCGAAAGATTGGTGCTTTTGAAGAGGAATTAAAGGCAGTTCTACCCAAGGAGGTTGAAAATGTAAGGTTGGCATATGAGAATGGAAGCTCTAAAATTAAAAATCAGATTAAGGATTGTAGATCTTACCCATTATACAAATTTGTGAGAGAGGAGTTGGGAACAAGATTGCTAACTGGAGAAAGGGTGATATCTCCGGGAGAAGAGTGTGAGAAGGTATTCGTAGCATTGTGTCAAGGAAAAATGATCAACTCTATCTTCGAGTGCTTGAAGGAGTGGAATGGAGCTCCCATCCCTATTTGCTAA 1905 43.25 MAHLNGSVESLCTSHQDPLNWGVAAESLKGSHLDEVKRMVEEYRRPVVKLGGQTLTISQVAAIATCDNDVVVELAESARAGVKASSDWVMESMSKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNSGIFGNGTESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAIVNLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNAKAIGPNEGLALVNGTAVGSGLSSIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGTEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLIFCEKDLLKVVDREYTFAYIDDPCNATYPLMQKLWQVLVEHALENGNNEVNSNTSIFRKIGAFEEELKAVLPKEVENVRLAYENGSSKIKNQIKDCRSYPLYKFVREELGTRLLTGERVISPGEECEKVFVALCQGKMINSIFECLKEWNGAPIPIC 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15374003 15376127 - Lag0021982.1 Lac7g1465 614366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g1465 634 Gene3D - 479 568 IPR023144 -
Lac7g1465 634 Pfam Aromatic amino acid lyase 55 478 IPR001106 -
Lac7g1465 634 PANTHER HISTIDINE AMMONIA-LYASE 218 478 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Lac7g1465 634 NCBIfam phenylalanine ammonia-lyase 217 478 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Lac7g1465 634 CDD PAL-HAL 53 478 IPR001106 -
Lac7g1465 634 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 190 206 IPR022313 GO:0016841(InterPro)
Lac7g1465 634 Gene3D - 8 229 IPR024083 -
Lac7g1465 634 Gene3D Fumarase/aspartase (Central domain) 569 629 - -
Lac7g1465 634 Gene3D Fumarase/aspartase (Central domain) 230 478 - -
Lac7g1465 634 FunFam Phenylalanine ammonia-lyase 8 230 - -
Lac7g1465 634 SUPERFAMILY L-aspartase-like 17 634 IPR008948 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g1465 Lac-Chr7:15374003 Lac8g2407 Lac-Chr8:42161594 6.40E-279 dispersed
Lac7g1465 Lac-Chr7:15374003 Lac7g1470 Lac-Chr7:15432577 0.00E+00 proximal
Lac7g1464 Lac-Chr7:15344884 Lac7g1465 Lac-Chr7:15374003 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g1465 K10775 - csv:116401606 1154.81