Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g1551 ATGGCTGGAAATACTCCCGATGGCAACTCCGGCAATCCGCCGTCGACGCCCGATTCCCCCTCCACCTCCGCCGCTTTCGAAACAGACCAGCTCCCTCATCTCAGCCACACTTCCGACAACTTCCCCGATGAGGACGAAGCCGCCGTTGATCCTCGTATCGTTCACGACGAGCCTGACCCCGATGACGAGGAGGAAGGAGAGGATCTCTACCACGACAATTTCTTGGACGATTATCGGAGGATGGACGAGCATGACCAGTACGAGTCCTTGGGCCTCGACGATTCTTTAGAGGACGAGAGGGATTTGGATCAGATTATGGAGGACAGACGAGCTGCCGAGATTGAACTCGAAACTCGCGATGCTCAGTTCACCCGTCGGAAGCTTCCTGAGCTACTACATGATCATGACTCTGAGGACGACAATTACAGGCCTTCAAAAAGATCAAGAGCTGATTTTAGGCCCCCAGCTGCAGCAAGAAGCTATGATGACATTGATGGTATGCAAAGTTCTCCTGGTAGATCACAAAGGGAAAACTCACGAGACGATGTGCCCATGACTGATCATTCTGTGGATGACCAATATGAGGATGAAGATGATGATGAAAATGAGAATGAGATGTATCGTGTTCAAGGGCCACTTAGAGAACATGTTACCATGGATGCCGTTCGGCGCTTTATAGGCAAAAAGTTTAAGAAATTCTTGGAAACATATGTGAATCCAAAGAGTGGAAATGGTGAGCTTGAGTACATGCGACTGATAAATGAGATGGTGTTAGCCAATAAGTGCAGTTTGGAAATTGATTACAAGCAGTTTATCTTTGTTCACCCAAATATTGCAATCTGGTTGGCTGATGCACCCCAACCCGTCTTAGAAGTTATGGAAGATGTTGCAAAGAAGGTTGTGTTTGACATACATCCAAACTACAAAAATATCCACCAAAAGATCTATGTTCGCATCAATAATTTACCAGTTTATGATCAGATTCGAAATATTAGGCAAATTCATTTAAATACCATGATTCGCATTGGGGGTGTAGTGACCCGACGCTCTGGTGTCTTCCCCCAGTTGCAGCAGGTGAAGTATGATTGTAATAAATGTGGAACAATATTGGGACCATTTTTTCAAAATTCTTATTCAGAGGTCAAGGTCGGTTCCTGTCCTGAATGCCAATCAAAAGGGCCGTTCACAGTAAATGTTGAGCAGACTATATATAGGAACTACCAAAAGCTAACCCTCCAAGAAAGTCCAGGAATTGTGCCAGCTGGTCGACTTCCAAGGTACAAGGAAGTGATACTGCTGAATGATCTAATTGATTGTGCCCGTCCCGGGGAAGAAATTGAAGTCACAGGCATTTATACAAATAATTTTGACTTATCATTGAATACAAAGAATGGTTTTCCTGTATTTTCCACGGTTGTTGAAGCAAATTATATTACCAAGAAGCAAGATCTCTTCTCTGCTTACAAGCTTACCCAGGAAGACAAAGAAGAGATTGAGAAGTTGGCTAAAGACCCTAGAATTGGAGAAAGGATTATCAAGTCCATTGCACCATCAATCTATGGTCACGAGGACATCAAAACAGCAATCGCTCTTGCAATGTTTGGAGGTCAAGAAAAAAATGTTGAAGGGAAACACCGGTTACGAGGTGATATCAATGTACTTTTACTAGGTGATCCTGGCACAGCCAAATCTCAATTTCTCAAGTATGTTGAGAAAACTGGGCACAGAGCAGTGTACACCACAGGAAAAGGAGCTTCAGCTGTAGGGCTAACAGCAGCAGTGCACAAGGATCCTGTCACAAGGGAGTGGACCCTTGAAGGAGGTGCCCTTGTATTAGCCGATAGAGGAATTTGTCTTATTGATGAGTTTGACAAAATGAATGATCAGGACAGGGTGAGTATCCATGAAGCAATGGAACAGCAAAGCATTAGCATATCAAAAGCTGGAATAGTCACTTCTCTTCAAGCCAGATGTTCTGTTATTGCAGCTGCCAATCCCATTGGAGGAAGGTACGACTCCTCAAAAACATTTACACAAAATGTAGAGCTGACTGATCCTATCATTTCTCGATTTGACATCCTCTGCGTTGTCAAGGATGTGGTAGACTCTATAACAGACGAGATGCTTGCTAAGTTTGTGGTTGATAGTCATTTCAAGTCACAGCCAAAGGGCGCTAATATTGATGATAAGTCCATAAATGAATCTCAGGAGGATAGTCAAGACTCTACAAGGCCACTAGATCCAGAGGTGCTCCCCCAAGATCTGCTGAAGAAGTACATAACTTATGCTAAATTGAACGTTTTTCCAAGGTTGCATGATTCTGATATGGATAAGCTAACACATGTCTATGCAGAACTACGAAGGGAATCTTCTCATGGGCAAGGAGTTCCTATTGCAGTTAGGCACATAGAGTCAATGATACGCATGTCTGAAGCACATGCTAGAATGCACCTTCGACAGCATGTTACACAAGAAGATGTTGATATGGCAATTCGTGTGTTACTTGATTCTTTCATTTCGACCCAAAAATTTGGGGTGCAGAAAGCTTTGCAAAAGAGCTTCAGAAAGTATATGACTTTCAAGAAGGATTACAATGAACTGCTGCTATATCTTCTCCGAGAGCTTGTGAAGAATGCACTTCACTTTGAGGAAATTGTTCGTGGATCTACAGCGGAGATTACGCACATCAATGTGAAATTGGAAGACCTACAAAGCAGGGCCCAGGAACATGAAATTTATGATCTGAAACCTTTCTTCGCCAGCTCTCATTTTTCAAATGCTAATTTTGTGGTGGATGAAGAGCATGGAGTAATCAGGCATCACCTTGCCAGATGA 2835 43.39 MAGNTPDGNSGNPPSTPDSPSTSAAFETDQLPHLSHTSDNFPDEDEAAVDPRIVHDEPDPDDEEEGEDLYHDNFLDDYRRMDEHDQYESLGLDDSLEDERDLDQIMEDRRAAEIELETRDAQFTRRKLPELLHDHDSEDDNYRPSKRSRADFRPPAAARSYDDIDGMQSSPGRSQRENSRDDVPMTDHSVDDQYEDEDDDENENEMYRVQGPLREHVTMDAVRRFIGKKFKKFLETYVNPKSGNGELEYMRLINEMVLANKCSLEIDYKQFIFVHPNIAIWLADAPQPVLEVMEDVAKKVVFDIHPNYKNIHQKIYVRINNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYSEVKVGSCPECQSKGPFTVNVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFSTVVEANYITKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFTQNVELTDPIISRFDILCVVKDVVDSITDEMLAKFVVDSHFKSQPKGANIDDKSINESQEDSQDSTRPLDPEVLPQDLLKKYITYAKLNVFPRLHDSDMDKLTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNELLLYLLRELVKNALHFEEIVRGSTAEITHINVKLEDLQSRAQEHEIYDLKPFFASSHFSNANFVVDEEHGVIRHHLAR 944
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 17284273 17290122 - Lag0022068.1 Lac7g1551 614452
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac7g1551 944 MobiDBLite consensus disorder prediction 115 158 - -
Lac7g1551 944 MobiDBLite consensus disorder prediction 38 56 - -
Lac7g1551 944 FunFam DNA helicase 220 324 - -
Lac7g1551 944 ProSiteProfiles MCM family domain profile. 507 713 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Lac7g1551 944 SUPERFAMILY Nucleic acid-binding proteins 229 476 IPR012340 -
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 337 354 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 471 482 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 395 409 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 360 372 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 456 467 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Lac7g1551 944 SMART mcm 324 839 IPR031327 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Lac7g1551 944 MobiDBLite consensus disorder prediction 730 744 - -
Lac7g1551 944 Pfam MCM P-loop domain 495 717 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Lac7g1551 944 FunFam DNA helicase 487 861 - -
Lac7g1551 944 MobiDBLite consensus disorder prediction 175 190 - -
Lac7g1551 944 Gene3D - 328 453 IPR012340 -
Lac7g1551 944 Gene3D - 355 405 - -
Lac7g1551 944 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 219 906 IPR031327 GO:0000727(PANTHER)|GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006268(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER)|GO:0043138(PANTHER)|GO:1902975(PANTHER)
Lac7g1551 944 MobiDBLite consensus disorder prediction 57 71 - -
Lac7g1551 944 FunFam DNA helicase 355 405 - -
Lac7g1551 944 Pfam MCM OB domain 327 454 IPR033762 -
Lac7g1551 944 MobiDBLite consensus disorder prediction 72 93 - -
Lac7g1551 944 Pfam MCM AAA-lid domain 754 838 IPR041562 -
Lac7g1551 944 Gene3D - 220 324 - -
Lac7g1551 944 CDD MCM2 510 837 - -
Lac7g1551 944 MobiDBLite consensus disorder prediction 115 210 - -
Lac7g1551 944 MobiDBLite consensus disorder prediction 1 99 - -
Lac7g1551 944 Gene3D - 487 861 IPR027417 -
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein family signature 687 695 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein family signature 608 622 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein family signature 660 672 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein family signature 548 563 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Lac7g1551 944 PRINTS Mini-chromosome maintenance (MCM) protein family signature 636 649 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Lac7g1551 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 841 IPR027417 -
Lac7g1551 944 ProSitePatterns MCM family signature. 616 624 IPR018525 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0006260(InterPro)
Lac7g1551 944 MobiDBLite consensus disorder prediction 1 37 - -
Lac7g1551 944 MobiDBLite consensus disorder prediction 723 748 - -
Lac7g1551 944 Pfam Mini-chromosome maintenance protein 2 44 167 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Lac7g1551 944 Pfam MCM N-terminal domain 228 321 IPR027925 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2877 Lac-Chr6:46398013 Lac7g1551 Lac-Chr7:17284273 2.80E-92 dispersed
Lac10g3047 Lac-Chr10:44966707 Lac7g1551 Lac-Chr7:17284273 7.60E-78 transposed
Lac12g0230 Lac-Chr12:2539126 Lac7g1551 Lac-Chr7:17284273 3.90E-69 transposed
Lac1g3505 Lac-Chr1:54305536 Lac7g1551 Lac-Chr7:17284273 2.20E-93 transposed
Lac1g3681 Lac-Chr1:55902180 Lac7g1551 Lac-Chr7:17284273 1.40E-84 transposed
Lac4g1433 Lac-Chr4:32762103 Lac7g1551 Lac-Chr7:17284273 3.20E-92 transposed
Lac4g2531 Lac-Chr4:44520817 Lac7g1551 Lac-Chr7:17284273 7.00E-88 transposed
Lac7g1551 Lac-Chr7:17284273 Lac7g1919 Lac-Chr7:28638726 1.30E-38 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g1551 K02540 - csv:101219546 1743.4